RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 COL2A1P02458 1487 aaPredicted RBP16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 A0A1B0GUL7 405 aa16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 LDHCP07864 332 aa16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 BMP8BP34820 402 aa16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 PABPC4Q13310 644 aaKnown RBP eCLIP16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 NECAB2Q7Z6G3 386 aa16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 PAWRQ96IZ0 340 aaKnown RBP16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 API5Q9BZZ5 524 aaKnown RBP16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.55■□□□□ 0.245e-6■□□□□ 8.4
SUPT5H-220ENST00000601978 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 GJD2Q9UKL4 321 aa16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
SUPT5H-220ENST00000601978 CAP2P40123 477 aa16.54■□□□□ 0.24
SUPT5H-220ENST00000601978 GSTO1P78417 241 aa16.54■□□□□ 0.24
SUPT5H-220ENST00000601978 SPP2Q13103 211 aa16.54■□□□□ 0.24
SUPT5H-220ENST00000601978 MTX1Q13505 466 aa16.54■□□□□ 0.24
SUPT5H-220ENST00000601978 SH3D19Q5HYK7 790 aa16.54■□□□□ 0.24
SUPT5H-220ENST00000601978 MEIS3Q99687 375 aa16.54■□□□□ 0.24
SUPT5H-220ENST00000601978 STAP2Q9UGK3 403 aa16.54■□□□□ 0.24
SUPT5H-220ENST00000601978 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
SUPT5H-220ENST00000601978 SOX1O00570 391 aaPredicted RBP16.53■□□□□ 0.24
SUPT5H-220ENST00000601978 HMGCRP04035 888 aa16.53■□□□□ 0.24
SUPT5H-220ENST00000601978 TFCP2Q12800 502 aa16.53■□□□□ 0.24
SUPT5H-220ENST00000601978 NSUN4Q96CB9 384 aaKnown RBP16.53■□□□□ 0.24
SUPT5H-220ENST00000601978 GDF15Q99988 308 aa16.53■□□□□ 0.24
SUPT5H-220ENST00000601978 HMG20BQ9P0W2 317 aa16.53■□□□□ 0.24
SUPT5H-220ENST00000601978 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
SUPT5H-220ENST00000601978 LOC285556D6RIA3 1793 aa16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 FAM196BA6NMK8 535 aa16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 USP17L5A8MUK1 530 aa16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 HMGCS2P54868 508 aa16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 GPR153Q6NV75 609 aa16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 ASCC2Q9H1I8 757 aaPredicted RBP16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 MORF4L1Q9UBU8 362 aa16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 HERC5Q9UII4 1024 aaKnown RBP16.52■□□□□ 0.24
SUPT5H-220ENST00000601978 ALPK3Q96L96 1907 aa16.51■□□□□ 0.23
SUPT5H-220ENST00000601978 GNAI3P08754 354 aa16.51■□□□□ 0.23
SUPT5H-220ENST00000601978 MNX1P50219 401 aaPredicted RBP16.51■□□□□ 0.23
SUPT5H-220ENST00000601978 RRP1BQ14684 758 aaKnown RBP16.51■□□□□ 0.23
SUPT5H-220ENST00000601978 SPATA5Q8NB90 893 aa16.51■□□□□ 0.23
SUPT5H-220ENST00000601978 DIS3LQ8TF46 1054 aaKnown RBP16.51■□□□□ 0.23
SUPT5H-220ENST00000601978 WDR18Q9BV38 432 aa16.51■□□□□ 0.23
SUPT5H-220ENST00000601978 NBPF3Q9H094 633 aa16.51■□□□□ 0.23
SUPT5H-220ENST00000601978 HMX1Q9NP08 348 aaPredicted RBP16.51■□□□□ 0.23
SUPT5H-220ENST00000601978 SRGAP3O43295 1099 aa16.5■□□□□ 0.23
SUPT5H-220ENST00000601978 ARID4AP29374 1257 aaPredicted RBP16.5■□□□□ 0.23
SUPT5H-220ENST00000601978 HOXA7P31268 230 aaPredicted RBP16.5■□□□□ 0.23
SUPT5H-220ENST00000601978 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
SUPT5H-220ENST00000601978 LRCH3Q96II8 777 aa16.5■□□□□ 0.23
SUPT5H-220ENST00000601978 AS3MTQ9HBK9 375 aa16.5■□□□□ 0.23
SUPT5H-220ENST00000601978 PI4KBQ9UBF8 816 aa16.5■□□□□ 0.23
SUPT5H-220ENST00000601978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
SUPT5H-220ENST00000601978 XRCC5P13010 732 aaKnown RBP16.49■□□□□ 0.23
SUPT5H-220ENST00000601978 MAP3K21Q5TCX8 1036 aa16.49■□□□□ 0.23
SUPT5H-220ENST00000601978 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
SUPT5H-220ENST00000601978 NEUROD6Q96NK8 337 aa16.49■□□□□ 0.23
SUPT5H-220ENST00000601978 DHX36Q9H2U1 1008 aaKnown RBP16.49■□□□□ 0.23
SUPT5H-220ENST00000601978 OGDHLQ9ULD0 1010 aa16.49■□□□□ 0.23
SUPT5H-220ENST00000601978 DLL1O00548 723 aa16.48■□□□□ 0.23
SUPT5H-220ENST00000601978 BACE1P56817 501 aa16.48■□□□□ 0.23
SUPT5H-220ENST00000601978 TRIM32Q13049 653 aa16.48■□□□□ 0.23
SUPT5H-220ENST00000601978 PI16Q6UXB8 463 aa16.48■□□□□ 0.23
SUPT5H-220ENST00000601978 METTL16Q86W50 562 aaKnown RBP16.48■□□□□ 0.23
SUPT5H-220ENST00000601978 TEX11Q8IYF3 940 aa16.48■□□□□ 0.23
SUPT5H-220ENST00000601978 GINM1Q9NU53 330 aa16.48■□□□□ 0.23
SUPT5H-220ENST00000601978 C19orf81C9J6K1 198 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 ASNSP08243 561 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 UQCRFS1P1P0C7P4 283 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 MCAMP43121 646 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 LRIT3Q3SXY7 679 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 GORABQ5T7V8 394 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 TRMT44Q8IYL2 757 aaKnown RBP16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 C7orf61Q8IZ16 206 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 TRIB2Q92519 343 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 C11orf49Q9H6J7 331 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 RAI14Q9P0K7 980 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
SUPT5H-220ENST00000601978 PLCG2P16885 1265 aa16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 PPP4CP60510 307 aa16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 IRX3P78415 501 aaPredicted RBP16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 FOXP4Q8IVH2 680 aaPredicted RBP16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 GPRC5AQ8NFJ5 357 aa16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 SH3RF3Q8TEJ3 882 aaPredicted RBP16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 SOCS4Q8WXH5 440 aa16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 P2RX7Q99572 595 aaKnown RBP16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 LRP2BPQ9P2M1 347 aa16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 ZMYND8Q9ULU4 1186 aaPredicted RBP16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 PLXNB2O15031 1838 aa16.46■□□□□ 0.23
SUPT5H-220ENST00000601978 LAMA3Q16787 3333 aa16.45■□□□□ 0.22
SUPT5H-220ENST00000601978 IGSF3O75054 1194 aa16.45■□□□□ 0.22
SUPT5H-220ENST00000601978 BAG3O95817 575 aa16.45■□□□□ 0.22
SUPT5H-220ENST00000601978 HERVK_113P62684 666 aa16.45■□□□□ 0.22
SUPT5H-220ENST00000601978 MTMR2Q13614 643 aa16.45■□□□□ 0.22
SUPT5H-220ENST00000601978 USP6NLQ92738 828 aa16.45■□□□□ 0.22
SUPT5H-220ENST00000601978 NOL10Q9BSC4 688 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms