RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TRIM34Q9BYJ4 488 aa23.63■■□□□ 1.37
SHKBP1-214ENST00000597396 SLC4A4Q9Y6R1 1079 aa23.63■■□□□ 1.37
SHKBP1-214ENST00000597396 M0R2C6 588 aa23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 GPAA1O43292 621 aa23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 PRKAB2O43741 272 aa23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 MAP2K2P36507 400 aa23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 NOGQ13253 232 aa23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 TICAM2Q86XR7 235 aa23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 CRACR2BQ8N4Y2 399 aaPredicted RBP23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 ELP3Q9H9T3 547 aa23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 ATP8A2Q9NTI2 1148 aa23.62■■□□□ 1.37
SHKBP1-214ENST00000597396 FAM155AB1AL88 458 aaPredicted RBP23.61■■□□□ 1.37
SHKBP1-214ENST00000597396 POLR3DP05423 398 aaPredicted RBP23.61■■□□□ 1.37
SHKBP1-214ENST00000597396 VGLL4Q14135 290 aa23.61■■□□□ 1.37
SHKBP1-214ENST00000597396 TTC6Q86TZ1 520 aa23.61■■□□□ 1.37
SHKBP1-214ENST00000597396 STRBPQ96SI9 672 aaKnown RBP23.61■■□□□ 1.37
SHKBP1-214ENST00000597396 SEC62Q99442 399 aaKnown RBP23.61■■□□□ 1.37
SHKBP1-214ENST00000597396 DCP1AQ9NPI6 582 aaPredicted RBP23.61■■□□□ 1.37
SHKBP1-214ENST00000597396 MCM9Q9NXL9 1143 aa23.61■■□□□ 1.37
SHKBP1-214ENST00000597396 FAM196BA6NMK8 535 aa23.6■■□□□ 1.37
SHKBP1-214ENST00000597396 TBC1D12O60347 775 aa23.6■■□□□ 1.37
SHKBP1-214ENST00000597396 SLURP2P0DP57 97 aa23.6■■□□□ 1.37
SHKBP1-214ENST00000597396 INPP5BP32019 993 aa23.6■■□□□ 1.37
SHKBP1-214ENST00000597396 MAP3K10Q02779 954 aa23.6■■□□□ 1.37
SHKBP1-214ENST00000597396 ZKSCAN4Q969J2 545 aaPredicted RBP23.6■■□□□ 1.37
SHKBP1-214ENST00000597396 HERC5Q9UII4 1024 aaKnown RBP23.6■■□□□ 1.37
SHKBP1-214ENST00000597396 ZNF112Q9UJU3 913 aa23.6■■□□□ 1.37
SHKBP1-214ENST00000597396 LAMB1P07942 1786 aa23.6■■□□□ 1.37
SHKBP1-214ENST00000597396 GSPT1P15170 499 aaKnown RBP23.59■■□□□ 1.37
SHKBP1-214ENST00000597396 GNAT2P19087 354 aa23.59■■□□□ 1.37
SHKBP1-214ENST00000597396 MKRN3Q13064 507 aaKnown RBP23.59■■□□□ 1.37
SHKBP1-214ENST00000597396 FOXP4Q8IVH2 680 aaPredicted RBP23.59■■□□□ 1.37
SHKBP1-214ENST00000597396 AMOTL1Q8IY63 956 aa23.59■■□□□ 1.37
SHKBP1-214ENST00000597396 HELLSQ9NRZ9 838 aa23.59■■□□□ 1.37
SHKBP1-214ENST00000597396 WNK4Q96J92 1243 aa23.58■■□□□ 1.37
SHKBP1-214ENST00000597396 TSKSQ9UJT2 592 aa23.58■■□□□ 1.37
SHKBP1-214ENST00000597396 HIP1O00291 1037 aa23.57■■□□□ 1.36
SHKBP1-214ENST00000597396 SDSP20132 328 aa23.57■■□□□ 1.36
SHKBP1-214ENST00000597396 NMIQ13287 307 aaPredicted RBP23.57■■□□□ 1.36
SHKBP1-214ENST00000597396 SPRYD7Q5W111 196 aa23.57■■□□□ 1.36
SHKBP1-214ENST00000597396 DIAPH3Q9NSV4 1193 aa23.57■■□□□ 1.36
SHKBP1-214ENST00000597396 SNCAIPQ9Y6H5 919 aa23.57■■□□□ 1.36
SHKBP1-214ENST00000597396 A0A0D9SFI3 127 aa23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 PHF20L1A8MW92 1017 aa23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 APPP05067 770 aa23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 KIF23Q02241 960 aaPredicted RBP23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 CCDC129Q6ZRS4 1044 aa23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 SKAP1Q86WV1 359 aa23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 OPTNQ96CV9 577 aa23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 FAM227BQ96M60 508 aa23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 ZIC5Q96T25 663 aa23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 SERPINB13Q9UIV8 391 aa23.56■■□□□ 1.36
SHKBP1-214ENST00000597396 GSG1L2A8MUP6 293 aa23.55■■□□□ 1.36
SHKBP1-214ENST00000597396 ZBTB48P10074 688 aaPredicted RBP23.55■■□□□ 1.36
SHKBP1-214ENST00000597396 PLCD1P51178 756 aa23.55■■□□□ 1.36
SHKBP1-214ENST00000597396 MCMDC2Q4G0Z9 681 aa23.55■■□□□ 1.36
SHKBP1-214ENST00000597396 NOL9Q5SY16 702 aaKnown RBP23.55■■□□□ 1.36
SHKBP1-214ENST00000597396 ERO1BQ86YB8 467 aa23.55■■□□□ 1.36
SHKBP1-214ENST00000597396 OTUD5Q96G74 571 aa23.55■■□□□ 1.36
SHKBP1-214ENST00000597396 EHD4Q9H223 541 aa23.55■■□□□ 1.36
SHKBP1-214ENST00000597396 PICK1Q9NRD5 415 aa23.55■■□□□ 1.36
SHKBP1-214ENST00000597396 SPDYE5A6NIY4 337 aa23.54■■□□□ 1.36
SHKBP1-214ENST00000597396 CTNND1O60716 968 aaKnown RBP23.54■■□□□ 1.36
SHKBP1-214ENST00000597396 CYP2D6P10635 497 aa23.54■■□□□ 1.36
SHKBP1-214ENST00000597396 GIMAP6Q6P9H5 292 aa23.54■■□□□ 1.36
SHKBP1-214ENST00000597396 METTL16Q86W50 562 aaKnown RBP23.54■■□□□ 1.36
SHKBP1-214ENST00000597396 SCYL3Q8IZE3 742 aa23.54■■□□□ 1.36
SHKBP1-214ENST00000597396 CNKSR2Q8WXI2 1034 aa23.54■■□□□ 1.36
SHKBP1-214ENST00000597396 DNAJC18Q9H819 358 aa23.54■■□□□ 1.36
SHKBP1-214ENST00000597396 PHIPQ8WWQ0 1821 aa23.54■■□□□ 1.36
SHKBP1-214ENST00000597396 PATL2C9JE40 543 aaKnown RBP23.53■■□□□ 1.36
SHKBP1-214ENST00000597396 USP17L12C9JPN9 530 aa23.53■■□□□ 1.36
SHKBP1-214ENST00000597396 USP17L21D6R901 530 aa23.53■■□□□ 1.36
SHKBP1-214ENST00000597396 CA12O43570 354 aa23.53■■□□□ 1.36
SHKBP1-214ENST00000597396 TDO2P48775 406 aa23.53■■□□□ 1.36
SHKBP1-214ENST00000597396 NACAP1Q9BZK3 213 aa23.53■■□□□ 1.36
SHKBP1-214ENST00000597396 ARPP21Q9UBL0 812 aaPredicted RBP23.53■■□□□ 1.36
SHKBP1-214ENST00000597396 GJA5P36382 358 aa23.52■■□□□ 1.36
SHKBP1-214ENST00000597396 CWC27Q6UX04 472 aaKnown RBP23.52■■□□□ 1.36
SHKBP1-214ENST00000597396 ABHD8Q96I13 439 aa23.52■■□□□ 1.36
SHKBP1-214ENST00000597396 CYP2D7A0A087X1C5 515 aa23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 CAP2P40123 477 aa23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 MFAP1P55081 439 aaKnown RBP23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 PPATQ06203 517 aa23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 C12orf60Q5U649 245 aa23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 CTR9Q6PD62 1173 aa23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 REM2Q8IYK8 340 aaPredicted RBP23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 IFNL3Q8IZI9 196 aa23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 EPB41L4AQ9HCS5 686 aaPredicted RBP23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 CCDC171Q6TFL3 1326 aa23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 PTPRFP10586 1907 aa23.51■■□□□ 1.35
SHKBP1-214ENST00000597396 MANSC4A6NHS7 340 aaPredicted RBP23.5■■□□□ 1.35
SHKBP1-214ENST00000597396 EVX2Q03828 476 aa23.5■■□□□ 1.35
SHKBP1-214ENST00000597396 SREBF2Q12772 1141 aa23.5■■□□□ 1.35
SHKBP1-214ENST00000597396 PPIL2Q13356 520 aa23.5■■□□□ 1.35
SHKBP1-214ENST00000597396 NAPBQ9H115 298 aa23.5■■□□□ 1.35
SHKBP1-214ENST00000597396 MINDY4BA8MYZ0 360 aa23.49■■□□□ 1.35
SHKBP1-214ENST00000597396 GDF11O95390 407 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms