RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 OS9Q13438 667 aaPredicted RBP29.37■■■□□ 2.29
LSM4-202ENST00000593564 PROCA1Q8NCQ7 364 aaPredicted RBP29.37■■■□□ 2.29
LSM4-202ENST00000593564 SH3RF3Q8TEJ3 882 aaPredicted RBP29.37■■■□□ 2.29
LSM4-202ENST00000593564 SNRKQ9NRH2 765 aa29.37■■■□□ 2.29
LSM4-202ENST00000593564 HERC5Q9UII4 1024 aaKnown RBP29.37■■■□□ 2.29
LSM4-202ENST00000593564 GABRQQ9UN88 632 aa29.37■■■□□ 2.29
LSM4-202ENST00000593564 GJB1P08034 283 aa29.36■■■□□ 2.29
LSM4-202ENST00000593564 CCL5P13501 91 aa29.36■■■□□ 2.29
LSM4-202ENST00000593564 UBXN2AP68543 259 aa29.36■■■□□ 2.29
LSM4-202ENST00000593564 NAA16Q6N069 864 aaPredicted RBP29.36■■■□□ 2.29
LSM4-202ENST00000593564 BIN2Q9UBW5 565 aaPredicted RBP29.36■■■□□ 2.29
LSM4-202ENST00000593564 PNMA3Q9UL41 463 aa29.36■■■□□ 2.29
LSM4-202ENST00000593564 MGAMO43451 1857 aa29.36■■■□□ 2.29
LSM4-202ENST00000593564 SURF6O75683 361 aaKnown RBP29.35■■■□□ 2.29
LSM4-202ENST00000593564 BAG3O95817 575 aa29.35■■■□□ 2.29
LSM4-202ENST00000593564 PLCG2P16885 1265 aa29.35■■■□□ 2.29
LSM4-202ENST00000593564 CAP2P40123 477 aa29.35■■■□□ 2.29
LSM4-202ENST00000593564 TREML2Q5T2D2 321 aa29.35■■■□□ 2.29
LSM4-202ENST00000593564 FTSJ3Q8IY81 847 aaKnown RBP29.35■■■□□ 2.29
LSM4-202ENST00000593564 ZNF280CQ8ND82 737 aa29.35■■■□□ 2.29
LSM4-202ENST00000593564 ZNF512BQ96KM6 892 aaPredicted RBP29.35■■■□□ 2.29
LSM4-202ENST00000593564 PI4KBQ9UBF8 816 aa29.35■■■□□ 2.29
LSM4-202ENST00000593564 IGSF3O75054 1194 aa29.34■■■□□ 2.29
LSM4-202ENST00000593564 GJA8P48165 433 aa29.34■■■□□ 2.29
LSM4-202ENST00000593564 PPP4CP60510 307 aa29.34■■■□□ 2.29
LSM4-202ENST00000593564 SPP2Q13103 211 aa29.34■■■□□ 2.29
LSM4-202ENST00000593564 RRP1BQ14684 758 aaKnown RBP29.34■■■□□ 2.29
LSM4-202ENST00000593564 DHX36Q9H2U1 1008 aaKnown RBP29.34■■■□□ 2.29
LSM4-202ENST00000593564 C1orf115Q9H7X2 142 aa29.34■■■□□ 2.29
LSM4-202ENST00000593564 AATFQ9NY61 560 aaKnown RBP eCLIP29.34■■■□□ 2.29
LSM4-202ENST00000593564 NOP58Q9Y2X3 529 aaKnown RBP29.34■■■□□ 2.29
LSM4-202ENST00000593564 CEP290O15078 2479 aa29.33■■■□□ 2.29
LSM4-202ENST00000593564 TNPO2O14787 897 aaKnown RBP29.33■■■□□ 2.29
LSM4-202ENST00000593564 CYP2E1P05181 493 aaPredicted RBP29.33■■■□□ 2.29
LSM4-202ENST00000593564 FLT3LGP49771 235 aa29.33■■■□□ 2.29
LSM4-202ENST00000593564 RNF208Q9H0X6 261 aa29.33■■■□□ 2.29
LSM4-202ENST00000593564 MAST2Q6P0Q8 1798 aa29.33■■■□□ 2.29
LSM4-202ENST00000593564 USP17L5A8MUK1 530 aa29.32■■■□□ 2.28
LSM4-202ENST00000593564 HNRNPUQ00839 825 aaKnown RBP eCLIP29.32■■■□□ 2.28
LSM4-202ENST00000593564 IRF5Q13568 498 aa29.32■■■□□ 2.28
LSM4-202ENST00000593564 FAM110CQ1W6H9 321 aa29.32■■■□□ 2.28
LSM4-202ENST00000593564 ANKRD13CQ8N6S4 541 aa29.32■■■□□ 2.28
LSM4-202ENST00000593564 ZBTB7BO15156 539 aaPredicted RBP29.31■■■□□ 2.28
LSM4-202ENST00000593564 ADCY3O60266 1144 aa29.31■■■□□ 2.28
LSM4-202ENST00000593564 UBE2Q1Q7Z7E8 422 aa29.31■■■□□ 2.28
LSM4-202ENST00000593564 ITPRIPQ8IWB1 547 aa29.31■■■□□ 2.28
LSM4-202ENST00000593564 PXYLP1Q8TE99 480 aa29.31■■■□□ 2.28
LSM4-202ENST00000593564 RLBP1P12271 317 aa29.3■■■□□ 2.28
LSM4-202ENST00000593564 HMGCS2P54868 508 aa29.3■■■□□ 2.28
LSM4-202ENST00000593564 PABPC4Q13310 644 aaKnown RBP eCLIP29.3■■■□□ 2.28
LSM4-202ENST00000593564 SH3D19Q5HYK7 790 aa29.3■■■□□ 2.28
LSM4-202ENST00000593564 ADGRA1Q86SQ6 560 aa29.3■■■□□ 2.28
LSM4-202ENST00000593564 TGFBRAP1Q8WUH2 860 aa29.3■■■□□ 2.28
LSM4-202ENST00000593564 AS3MTQ9HBK9 375 aa29.3■■■□□ 2.28
LSM4-202ENST00000593564 DBNLQ9UJU6 430 aaKnown RBP29.3■■■□□ 2.28
LSM4-202ENST00000593564 LOC285556D6RIA3 1793 aa29.3■■■□□ 2.28
LSM4-202ENST00000593564 FLT1P17948 1338 aa29.29■■■□□ 2.28
LSM4-202ENST00000593564 ZAP70P43403 619 aa29.29■■■□□ 2.28
LSM4-202ENST00000593564 GCLCP48506 637 aaPredicted RBP29.29■■■□□ 2.28
LSM4-202ENST00000593564 METTL16Q86W50 562 aaKnown RBP29.29■■■□□ 2.28
LSM4-202ENST00000593564 UNC93B1Q9H1C4 597 aa29.29■■■□□ 2.28
LSM4-202ENST00000593564 H0YGN5 161 aa29.28■■■□□ 2.28
LSM4-202ENST00000593564 MAPKAPK5Q8IW41 473 aa29.28■■■□□ 2.28
LSM4-202ENST00000593564 COA7Q96BR5 231 aa29.28■■■□□ 2.28
LSM4-202ENST00000593564 WDR18Q9BV38 432 aa29.28■■■□□ 2.28
LSM4-202ENST00000593564 PIH1D3Q9NQM4 214 aaKnown RBP29.28■■■□□ 2.28
LSM4-202ENST00000593564 ATAD5Q96QE3 1844 aa29.28■■■□□ 2.28
LSM4-202ENST00000593564 ELNP15502 786 aa29.27■■■□□ 2.28
LSM4-202ENST00000593564 U2AF1L4Q8WU68 220 aaKnown RBP29.27■■■□□ 2.28
LSM4-202ENST00000593564 TLR7Q9NYK1 1049 aaKnown RBP29.27■■■□□ 2.28
LSM4-202ENST00000593564 SIPA1L1O43166 1804 aa29.27■■■□□ 2.28
LSM4-202ENST00000593564 INHAP05111 366 aa29.26■■■□□ 2.27
LSM4-202ENST00000593564 ASNSP08243 561 aa29.26■■■□□ 2.27
LSM4-202ENST00000593564 FOXP4Q8IVH2 680 aaPredicted RBP29.26■■■□□ 2.27
LSM4-202ENST00000593564 ASCC2Q9H1I8 757 aaPredicted RBP29.26■■■□□ 2.27
LSM4-202ENST00000593564 DNAJC18Q9H819 358 aa29.26■■■□□ 2.27
LSM4-202ENST00000593564 COLQQ9Y215 455 aaPredicted RBP29.26■■■□□ 2.27
LSM4-202ENST00000593564 EAF2Q96CJ1 260 aaPredicted RBP29.25■■■□□ 2.27
LSM4-202ENST00000593564 SGPL1O95470 568 aa29.24■■■□□ 2.27
LSM4-202ENST00000593564 CRACR2BQ8N4Y2 399 aaPredicted RBP29.24■■■□□ 2.27
LSM4-202ENST00000593564 DPF3Q92784 378 aa29.24■■■□□ 2.27
LSM4-202ENST00000593564 CCDC8Q9H0W5 538 aaPredicted RBP29.24■■■□□ 2.27
LSM4-202ENST00000593564 GINM1Q9NU53 330 aa29.24■■■□□ 2.27
LSM4-202ENST00000593564 CAPN2P17655 700 aa29.23■■■□□ 2.27
LSM4-202ENST00000593564 BACE1P56817 501 aa29.23■■■□□ 2.27
LSM4-202ENST00000593564 MTMR2Q13614 643 aa29.23■■■□□ 2.27
LSM4-202ENST00000593564 CEP85Q6P2H3 762 aa29.23■■■□□ 2.27
LSM4-202ENST00000593564 HTATIP2Q9BUP3 242 aa29.23■■■□□ 2.27
LSM4-202ENST00000593564 TRIM34Q9BYJ4 488 aa29.23■■■□□ 2.27
LSM4-202ENST00000593564 PALD1Q9ULE6 856 aa29.23■■■□□ 2.27
LSM4-202ENST00000593564 FOCADQ5VW36 1801 aa29.22■■■□□ 2.27
LSM4-202ENST00000593564 FARP2O94887 1054 aaPredicted RBP29.22■■■□□ 2.27
LSM4-202ENST00000593564 CYP7A1P22680 504 aa29.22■■■□□ 2.27
LSM4-202ENST00000593564 FXR1P51114 621 aaKnown RBP eCLIP29.22■■■□□ 2.27
LSM4-202ENST00000593564 JAG1P78504 1218 aa29.22■■■□□ 2.27
LSM4-202ENST00000593564 MIER1Q8N108 512 aa29.22■■■□□ 2.27
LSM4-202ENST00000593564 CDK5RAP2Q96SN8 1893 aa29.21■■■□□ 2.27
LSM4-202ENST00000593564 DYNLL1P63167 89 aaKnown RBP29.21■■■□□ 2.27
LSM4-202ENST00000593564 PAK6Q9NQU5 681 aaPredicted RBP29.21■■■□□ 2.27
LSM4-202ENST00000593564 TMOD4Q9NZQ9 345 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms