RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 AGTPBP1Q9UPW5 1226 aa16.37■□□□□ 0.21
PKN1-211ENST00000588200 ATAD5Q96QE3 1844 aa16.36■□□□□ 0.21
PKN1-211ENST00000588200 CAP2P40123 477 aa16.36■□□□□ 0.21
PKN1-211ENST00000588200 SH3D19Q5HYK7 790 aa16.36■□□□□ 0.21
PKN1-211ENST00000588200 TTC39AQ5SRH9 613 aa16.36■□□□□ 0.21
PKN1-211ENST00000588200 NAA16Q6N069 864 aaPredicted RBP16.36■□□□□ 0.21
PKN1-211ENST00000588200 CERS3Q8IU89 383 aa16.36■□□□□ 0.21
PKN1-211ENST00000588200 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
PKN1-211ENST00000588200 DBNLQ9UJU6 430 aaKnown RBP16.36■□□□□ 0.21
PKN1-211ENST00000588200 SIPA1L1O43166 1804 aa16.35■□□□□ 0.21
PKN1-211ENST00000588200 MYO5AQ9Y4I1 1855 aaKnown RBP16.35■□□□□ 0.21
PKN1-211ENST00000588200 FMNL1O95466 1100 aaPredicted RBP16.35■□□□□ 0.21
PKN1-211ENST00000588200 SLURP2P0DP57 97 aa16.35■□□□□ 0.21
PKN1-211ENST00000588200 CYP2C8P10632 490 aa16.35■□□□□ 0.21
PKN1-211ENST00000588200 GRK4P32298 578 aa16.35■□□□□ 0.21
PKN1-211ENST00000588200 FCGRTP55899 365 aa16.35■□□□□ 0.21
PKN1-211ENST00000588200 FOXP4Q8IVH2 680 aaPredicted RBP16.35■□□□□ 0.21
PKN1-211ENST00000588200 ZNF280CQ8ND82 737 aa16.35■□□□□ 0.21
PKN1-211ENST00000588200 SH3TC2Q8TF17 1288 aa16.35■□□□□ 0.21
PKN1-211ENST00000588200 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
PKN1-211ENST00000588200 WDR18Q9BV38 432 aa16.35■□□□□ 0.21
PKN1-211ENST00000588200 IRF5Q13568 498 aa16.34■□□□□ 0.21
PKN1-211ENST00000588200 DIEXFQ68CQ4 756 aaKnown RBP16.34■□□□□ 0.21
PKN1-211ENST00000588200 CEP85Q6P2H3 762 aa16.34■□□□□ 0.21
PKN1-211ENST00000588200 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
PKN1-211ENST00000588200 ITPRIPQ8IWB1 547 aa16.34■□□□□ 0.21
PKN1-211ENST00000588200 NKX2-3Q8TAU0 364 aa16.34■□□□□ 0.21
PKN1-211ENST00000588200 RAET1EQ8TD07 263 aa16.34■□□□□ 0.21
PKN1-211ENST00000588200 PXYLP1Q8TE99 480 aa16.34■□□□□ 0.21
PKN1-211ENST00000588200 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
PKN1-211ENST00000588200 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
PKN1-211ENST00000588200 PNMA3Q9UL41 463 aa16.34■□□□□ 0.21
PKN1-211ENST00000588200 MYPNQ86TC9 1320 aa16.34■□□□□ 0.21
PKN1-211ENST00000588200 TRIM75PA6NK02 468 aa16.33■□□□□ 0.2
PKN1-211ENST00000588200 USP17L5A8MUK1 530 aa16.33■□□□□ 0.2
PKN1-211ENST00000588200 GJB1P08034 283 aa16.33■□□□□ 0.2
PKN1-211ENST00000588200 MS4A1P11836 297 aa16.33■□□□□ 0.2
PKN1-211ENST00000588200 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
PKN1-211ENST00000588200 FAM110CQ1W6H9 321 aa16.33■□□□□ 0.2
PKN1-211ENST00000588200 SLC4A8Q2Y0W8 1093 aa16.33■□□□□ 0.2
PKN1-211ENST00000588200 GADL1Q6ZQY3 521 aa16.33■□□□□ 0.2
PKN1-211ENST00000588200 SLAIN1Q8ND83 568 aa16.33■□□□□ 0.2
PKN1-211ENST00000588200 ASNSP08243 561 aa16.32■□□□□ 0.2
PKN1-211ENST00000588200 ZAP70P43403 619 aa16.32■□□□□ 0.2
PKN1-211ENST00000588200 GJA8P48165 433 aa16.32■□□□□ 0.2
PKN1-211ENST00000588200 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
PKN1-211ENST00000588200 SPP2Q13103 211 aa16.32■□□□□ 0.2
PKN1-211ENST00000588200 PABPC4Q13310 644 aaKnown RBP eCLIP16.32■□□□□ 0.28e-7■□□□□ 8.3
PKN1-211ENST00000588200 RRP1BQ14684 758 aaKnown RBP16.32■□□□□ 0.2
PKN1-211ENST00000588200 ADGRA1Q86SQ6 560 aa16.32■□□□□ 0.2
PKN1-211ENST00000588200 DOCK3Q8IZD9 2030 aa16.32■□□□□ 0.2
PKN1-211ENST00000588200 C1orf115Q9H7X2 142 aa16.32■□□□□ 0.2
PKN1-211ENST00000588200 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
PKN1-211ENST00000588200 SNRKQ9NRH2 765 aa16.32■□□□□ 0.2
PKN1-211ENST00000588200 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
PKN1-211ENST00000588200 RANBP2P49792 3224 aaKnown RBP16.31■□□□□ 0.2
PKN1-211ENST00000588200 FLT1P17948 1338 aa16.31■□□□□ 0.2
PKN1-211ENST00000588200 HOXA7P31268 230 aaPredicted RBP16.31■□□□□ 0.2
PKN1-211ENST00000588200 PRKCZQ05513 592 aa16.31■□□□□ 0.2
PKN1-211ENST00000588200 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
PKN1-211ENST00000588200 UBE2Q1Q7Z7E8 422 aa16.31■□□□□ 0.2
PKN1-211ENST00000588200 SMCR8Q8TEV9 937 aaPredicted RBP16.31■□□□□ 0.2
PKN1-211ENST00000588200 FAM196BA6NMK8 535 aa16.3■□□□□ 0.2
PKN1-211ENST00000588200 UBXN2AP68543 259 aa16.3■□□□□ 0.2
PKN1-211ENST00000588200 MTFR1Q15390 333 aa16.3■□□□□ 0.2
PKN1-211ENST00000588200 TREML2Q5T2D2 321 aa16.3■□□□□ 0.2
PKN1-211ENST00000588200 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
PKN1-211ENST00000588200 SHISA4Q96DD7 197 aa16.3■□□□□ 0.2
PKN1-211ENST00000588200 DNAJC18Q9H819 358 aa16.3■□□□□ 0.2
PKN1-211ENST00000588200 PIH1D3Q9NQM4 214 aaKnown RBP16.3■□□□□ 0.2
PKN1-211ENST00000588200 C19orf81C9J6K1 198 aa16.29■□□□□ 0.2
PKN1-211ENST00000588200 BACE1P56817 501 aa16.29■□□□□ 0.2
PKN1-211ENST00000588200 RPAP2Q8IXW5 612 aaPredicted RBP16.29■□□□□ 0.2
PKN1-211ENST00000588200 CCDC8Q9H0W5 538 aaPredicted RBP16.29■□□□□ 0.2
PKN1-211ENST00000588200 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
PKN1-211ENST00000588200 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.29■□□□□ 0.2
PKN1-211ENST00000588200 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
PKN1-211ENST00000588200 MYH1P12882 1939 aa16.28■□□□□ 0.2
PKN1-211ENST00000588200 TNPO2O14787 897 aaKnown RBP16.28■□□□□ 0.2
PKN1-211ENST00000588200 CCL5P13501 91 aa16.28■□□□□ 0.2
PKN1-211ENST00000588200 FLT3LGP49771 235 aa16.28■□□□□ 0.2
PKN1-211ENST00000588200 HMGCS2P54868 508 aa16.28■□□□□ 0.2
PKN1-211ENST00000588200 TATDN1Q6P1N9 297 aa16.28■□□□□ 0.2
PKN1-211ENST00000588200 CCDC84Q86UT8 332 aaPredicted RBP16.28■□□□□ 0.2
PKN1-211ENST00000588200 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
PKN1-211ENST00000588200 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.28■□□□□ 0.2
PKN1-211ENST00000588200 EHD4Q9H223 541 aa16.28■□□□□ 0.2
PKN1-211ENST00000588200 MORF4L1Q9UBU8 362 aa16.28■□□□□ 0.2
PKN1-211ENST00000588200 CEP290O15078 2479 aa16.27■□□□□ 0.2
PKN1-211ENST00000588200 ADCY3O60266 1144 aa16.27■□□□□ 0.2
PKN1-211ENST00000588200 MAP3K12Q12852 859 aa16.27■□□□□ 0.2
PKN1-211ENST00000588200 ANKRD13CQ8N6S4 541 aa16.27■□□□□ 0.2
PKN1-211ENST00000588200 COA7Q96BR5 231 aa16.27■□□□□ 0.2
PKN1-211ENST00000588200 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
PKN1-211ENST00000588200 ZBTB40Q9NUA8 1239 aa16.27■□□□□ 0.2
PKN1-211ENST00000588200 TAOK2Q9UL54 1235 aa16.27■□□□□ 0.2
PKN1-211ENST00000588200 PALD1Q9ULE6 856 aa16.27■□□□□ 0.2
PKN1-211ENST00000588200 USP17L10C9JJH3 530 aa16.26■□□□□ 0.19
PKN1-211ENST00000588200 SGPL1O95470 568 aa16.26■□□□□ 0.19
PKN1-211ENST00000588200 HLA-DOAP06340 250 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms