RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 PPP4CP60510 307 aa17.23■□□□□ 0.35
HDAC5-203ENST00000586339 GADL1Q6ZQY3 521 aa17.23■□□□□ 0.35
HDAC5-203ENST00000586339 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
HDAC5-203ENST00000586339 TRIM75PA6NK02 468 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 FMNL1O95466 1100 aaPredicted RBP17.22■□□□□ 0.35
HDAC5-203ENST00000586339 CYP2E1P05181 493 aaPredicted RBP17.22■□□□□ 0.35
HDAC5-203ENST00000586339 CYP2C8P10632 490 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 EN2P19622 333 aaPredicted RBP17.22■□□□□ 0.35
HDAC5-203ENST00000586339 OSBPP22059 807 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 CTGFP29279 349 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 FCGRTP55899 365 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 SLC4A8Q2Y0W8 1093 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 CEP85Q6P2H3 762 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 ERC1Q8IUD2 1116 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 PROCA1Q8NCQ7 364 aaPredicted RBP17.22■□□□□ 0.35
HDAC5-203ENST00000586339 SH3RF3Q8TEJ3 882 aaPredicted RBP17.22■□□□□ 0.35
HDAC5-203ENST00000586339 SNRKQ9NRH2 765 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 PI4KBQ9UBF8 816 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 DBNLQ9UJU6 430 aaKnown RBP17.22■□□□□ 0.35
HDAC5-203ENST00000586339 PNMA3Q9UL41 463 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 AGTPBP1Q9UPW5 1226 aa17.22■□□□□ 0.35
HDAC5-203ENST00000586339 MYPNQ86TC9 1320 aa17.21■□□□□ 0.35
HDAC5-203ENST00000586339 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
HDAC5-203ENST00000586339 MS4A1P11836 297 aa17.21■□□□□ 0.35
HDAC5-203ENST00000586339 TMED8Q6PL24 325 aaPredicted RBP17.21■□□□□ 0.35
HDAC5-203ENST00000586339 CERS3Q8IU89 383 aa17.21■□□□□ 0.35
HDAC5-203ENST00000586339 RAET1EQ8TD07 263 aa17.21■□□□□ 0.35
HDAC5-203ENST00000586339 SH3TC2Q8TF17 1288 aa17.21■□□□□ 0.35
HDAC5-203ENST00000586339 GCC1Q96CN9 775 aa17.21■□□□□ 0.35
HDAC5-203ENST00000586339 AATFQ9NY61 560 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDAC5-203ENST00000586339 FAM196BA6NMK8 535 aa17.2■□□□□ 0.34
HDAC5-203ENST00000586339 CAP2P40123 477 aa17.2■□□□□ 0.34
HDAC5-203ENST00000586339 ZAP70P43403 619 aa17.2■□□□□ 0.34
HDAC5-203ENST00000586339 ZNF280CQ8ND82 737 aa17.2■□□□□ 0.34
HDAC5-203ENST00000586339 SMCR8Q8TEV9 937 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-203ENST00000586339 FLT1P17948 1338 aa17.2■□□□□ 0.34
HDAC5-203ENST00000586339 GRK4P32298 578 aa17.19■□□□□ 0.34
HDAC5-203ENST00000586339 METTL16Q86W50 562 aaKnown RBP17.19■□□□□ 0.34
HDAC5-203ENST00000586339 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
HDAC5-203ENST00000586339 AS3MTQ9HBK9 375 aa17.19■□□□□ 0.34
HDAC5-203ENST00000586339 GINM1Q9NU53 330 aa17.19■□□□□ 0.34
HDAC5-203ENST00000586339 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.19■□□□□ 0.34
HDAC5-203ENST00000586339 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
HDAC5-203ENST00000586339 PABPC4Q13310 644 aaKnown RBP eCLIP17.18■□□□□ 0.342e-7■■■■■ 38.7
HDAC5-203ENST00000586339 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
HDAC5-203ENST00000586339 ADGRA1Q86SQ6 560 aa17.18■□□□□ 0.34
HDAC5-203ENST00000586339 CCDC84Q86UT8 332 aaPredicted RBP17.18■□□□□ 0.34
HDAC5-203ENST00000586339 SLAIN1Q8ND83 568 aa17.18■□□□□ 0.34
HDAC5-203ENST00000586339 TGFBRAP1Q8WUH2 860 aa17.18■□□□□ 0.34
HDAC5-203ENST00000586339 TLR7Q9NYK1 1049 aaKnown RBP17.18■□□□□ 0.34
HDAC5-203ENST00000586339 ECM2O94769 699 aaPredicted RBP17.17■□□□□ 0.34
HDAC5-203ENST00000586339 ASNSP08243 561 aa17.17■□□□□ 0.34
HDAC5-203ENST00000586339 PRKCZQ05513 592 aa17.17■□□□□ 0.34
HDAC5-203ENST00000586339 SPP2Q13103 211 aa17.17■□□□□ 0.34
HDAC5-203ENST00000586339 FAM110CQ1W6H9 321 aa17.17■□□□□ 0.34
HDAC5-203ENST00000586339 DDX60LQ5H9U9 1706 aaKnown RBP17.17■□□□□ 0.34
HDAC5-203ENST00000586339 SH3D19Q5HYK7 790 aa17.17■□□□□ 0.34
HDAC5-203ENST00000586339 NKX2-3Q8TAU0 364 aa17.17■□□□□ 0.34
HDAC5-203ENST00000586339 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
HDAC5-203ENST00000586339 PIH1D3Q9NQM4 214 aaKnown RBP17.17■□□□□ 0.34
HDAC5-203ENST00000586339 NAV1Q8NEY1 1877 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 HLA-DOAP06340 250 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 GCLCP48506 637 aaPredicted RBP17.16■□□□□ 0.34
HDAC5-203ENST00000586339 UBXN2AP68543 259 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 IRF5Q13568 498 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 TREML2Q5T2D2 321 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 FOXP4Q8IVH2 680 aaPredicted RBP17.16■□□□□ 0.34
HDAC5-203ENST00000586339 MAPKAPK5Q8IW41 473 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 PANK1Q8TE04 598 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 WDR18Q9BV38 432 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 TRIM34Q9BYJ4 488 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 EXOC6BQ9Y2D4 811 aa17.16■□□□□ 0.34
HDAC5-203ENST00000586339 TNPO2O14787 897 aaKnown RBP17.15■□□□□ 0.34
HDAC5-203ENST00000586339 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
HDAC5-203ENST00000586339 MYCP01106 439 aaPredicted RBP17.15■□□□□ 0.34
HDAC5-203ENST00000586339 CYP7A1P22680 504 aa17.15■□□□□ 0.34
HDAC5-203ENST00000586339 HMGCS2P54868 508 aa17.15■□□□□ 0.34
HDAC5-203ENST00000586339 RRP1BQ14684 758 aaKnown RBP17.15■□□□□ 0.34
HDAC5-203ENST00000586339 AACSQ86V21 672 aa17.15■□□□□ 0.34
HDAC5-203ENST00000586339 CRACR2BQ8N4Y2 399 aaPredicted RBP17.15■□□□□ 0.34
HDAC5-203ENST00000586339 DNAJC18Q9H819 358 aa17.15■□□□□ 0.34
HDAC5-203ENST00000586339 MYH7P12883 1935 aa17.15■□□□□ 0.34
HDAC5-203ENST00000586339 MYH8P13535 1937 aa17.14■□□□□ 0.33
HDAC5-203ENST00000586339 GJB1P08034 283 aa17.14■□□□□ 0.33
HDAC5-203ENST00000586339 MAP3K12Q12852 859 aa17.14■□□□□ 0.33
HDAC5-203ENST00000586339 MTFR1Q15390 333 aa17.14■□□□□ 0.33
HDAC5-203ENST00000586339 ANKRD13CQ8N6S4 541 aa17.14■□□□□ 0.33
HDAC5-203ENST00000586339 PXYLP1Q8TE99 480 aa17.14■□□□□ 0.33
HDAC5-203ENST00000586339 DDX19BQ9UMR2 479 aa17.14■□□□□ 0.33
HDAC5-203ENST00000586339 GABRQQ9UN88 632 aa17.14■□□□□ 0.33
HDAC5-203ENST00000586339 TRIOBPQ9H2D6 2365 aa17.13■□□□□ 0.33
HDAC5-203ENST00000586339 HMMRO75330 724 aa17.13■□□□□ 0.33
HDAC5-203ENST00000586339 CAPN2P17655 700 aa17.13■□□□□ 0.33
HDAC5-203ENST00000586339 GJA8P48165 433 aa17.13■□□□□ 0.33
HDAC5-203ENST00000586339 FLT3LGP49771 235 aa17.13■□□□□ 0.33
HDAC5-203ENST00000586339 RPAP2Q8IXW5 612 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-203ENST00000586339 MAGEB6Q8N7X4 407 aa17.13■□□□□ 0.33
HDAC5-203ENST00000586339 RHPN1Q8TCX5 695 aa17.13■□□□□ 0.33
HDAC5-203ENST00000586339 COA7Q96BR5 231 aa17.13■□□□□ 0.33
HDAC5-203ENST00000586339 SHISA4Q96DD7 197 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms