RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 VEZTQ9HBM0 779 aa21.15■□□□□ 0.98
EIF4A1-216ENST00000580888 PDRG1Q9NUG6 133 aa21.15■□□□□ 0.98
EIF4A1-216ENST00000580888 SUGT1Q9Y2Z0 365 aa21.15■□□□□ 0.98
EIF4A1-216ENST00000580888 MYO5AQ9Y4I1 1855 aaKnown RBP21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 SEMA3EO15041 775 aa21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 PDE6AP16499 860 aa21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 SREBF2Q12772 1141 aa21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 RASA3Q14644 834 aa21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 GRIK5Q16478 980 aa21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 NOM1Q5C9Z4 860 aaKnown RBP21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 NBPF12Q5TAG4 269 aaPredicted RBP21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 ZGPATQ8N5A5 531 aaKnown RBP21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 ZSCAN31Q96LW9 406 aaPredicted RBP21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 IQSEC3Q9UPP2 1182 aaPredicted RBP21.14■□□□□ 0.97
EIF4A1-216ENST00000580888 NUCB2P80303 420 aa21.13■□□□□ 0.97
EIF4A1-216ENST00000580888 SLC9C2Q5TAH2 1124 aa21.13■□□□□ 0.97
EIF4A1-216ENST00000580888 BLOC1S2Q6QNY1 142 aa21.13■□□□□ 0.97
EIF4A1-216ENST00000580888 TDRD3Q9H7E2 651 aaKnown RBP21.13■□□□□ 0.97
EIF4A1-216ENST00000580888 FOXD4L1Q9NU39 408 aa21.13■□□□□ 0.97
EIF4A1-216ENST00000580888 GNL3LQ9NVN8 582 aaKnown RBP21.13■□□□□ 0.97
EIF4A1-216ENST00000580888 GPAA1O43292 621 aa21.12■□□□□ 0.97
EIF4A1-216ENST00000580888 ZBTB48P10074 688 aaPredicted RBP21.12■□□□□ 0.97
EIF4A1-216ENST00000580888 CPA1P15085 419 aa21.12■□□□□ 0.97
EIF4A1-216ENST00000580888 CHAF1AQ13111 956 aaPredicted RBP21.12■□□□□ 0.97
EIF4A1-216ENST00000580888 TEPSINQ96N21 525 aa21.12■□□□□ 0.97
EIF4A1-216ENST00000580888 SH2B1Q9NRF2 756 aaPredicted RBP21.12■□□□□ 0.97
EIF4A1-216ENST00000580888 CTNNA3Q9UI47 895 aa21.12■□□□□ 0.97
EIF4A1-216ENST00000580888 FZD1Q9UP38 647 aa21.12■□□□□ 0.97
EIF4A1-216ENST00000580888 ZNF532Q9HCE3 1301 aa21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 IGSF3O75054 1194 aa21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 USP2O75604 605 aaPredicted RBP21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 RGS19P49795 217 aa21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 MAP3K12Q12852 859 aa21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 COL9A3Q14050 684 aaPredicted RBP21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 ALX1Q15699 326 aa21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 STOX1Q6ZVD7 989 aa21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 TNPO1Q92973 898 aaKnown RBP21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 SLC10A4Q96EP9 437 aa21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 NEK1Q96PY6 1258 aa21.11■□□□□ 0.97
EIF4A1-216ENST00000580888 ZMYM6O95789 1325 aa21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 MANSC4A6NHS7 340 aaPredicted RBP21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 CCDC85CA6NKD9 419 aa21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 HMGB1P09429 215 aaKnown RBP21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 MCM4P33991 863 aa21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 IREB2P48200 963 aaKnown RBP21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 INHBEP58166 350 aa21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 ANKRD1Q15327 319 aa21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 TEKT1Q969V4 418 aa21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 WNK4Q96J92 1243 aa21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 ZDHHC15Q96MV8 337 aa21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 DENND2AQ9ULE3 1009 aa21.1■□□□□ 0.97
EIF4A1-216ENST00000580888 IDH1O75874 414 aaKnown RBP21.09■□□□□ 0.97
EIF4A1-216ENST00000580888 TNNI2P48788 182 aa21.09■□□□□ 0.97
EIF4A1-216ENST00000580888 MKRN3Q13064 507 aaKnown RBP21.09■□□□□ 0.97
EIF4A1-216ENST00000580888 CTU1Q7Z7A3 348 aaKnown RBP21.09■□□□□ 0.97
EIF4A1-216ENST00000580888 ANKRD13AQ8IZ07 590 aa21.09■□□□□ 0.97
EIF4A1-216ENST00000580888 FBXL16Q8N461 479 aa21.09■□□□□ 0.97
EIF4A1-216ENST00000580888 CLMNQ96JQ2 1002 aa21.09■□□□□ 0.97
EIF4A1-216ENST00000580888 STRBPQ96SI9 672 aaKnown RBP21.09■□□□□ 0.97
EIF4A1-216ENST00000580888 AGXT2Q9BYV1 514 aa21.09■□□□□ 0.97
EIF4A1-216ENST00000580888 TBC1D8O95759 1140 aa21.08■□□□□ 0.97
EIF4A1-216ENST00000580888 ALDH1A1P00352 501 aa21.08■□□□□ 0.97
EIF4A1-216ENST00000580888 FGAP02671 866 aa21.08■□□□□ 0.97
EIF4A1-216ENST00000580888 EXOSC10Q01780 885 aaKnown RBP21.08■□□□□ 0.97
EIF4A1-216ENST00000580888 TOB2Q14106 344 aaPredicted RBP21.08■□□□□ 0.97
EIF4A1-216ENST00000580888 FKBP1CQ5VVH2 108 aa21.08■□□□□ 0.97
EIF4A1-216ENST00000580888 TMED8Q6PL24 325 aaPredicted RBP21.08■□□□□ 0.97
EIF4A1-216ENST00000580888 HHIPL2Q6UWX4 724 aa21.08■□□□□ 0.97
EIF4A1-216ENST00000580888 WDR66Q8TBY9 1149 aa21.08■□□□□ 0.97
EIF4A1-216ENST00000580888 LAMA4Q16363 1823 aa21.07■□□□□ 0.96
EIF4A1-216ENST00000580888 ZNF296Q8WUU4 475 aaPredicted RBP21.07■□□□□ 0.96
EIF4A1-216ENST00000580888 ZDHHC9Q9Y397 364 aa21.07■□□□□ 0.96
EIF4A1-216ENST00000580888 TCP10L2B9ZVM9 353 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 E7EWF7 191 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 GPR25O00155 361 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 LARGE1O95461 756 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 ST3GAL1Q11201 340 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 ME3Q16798 604 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 APOBEC3HQ6NTF7 200 aaKnown RBP21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 DHX32Q7L7V1 743 aaKnown RBP21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 FAM83AQ86UY5 434 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 TMEM39BQ9GZU3 492 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 TPCN1Q9ULQ1 816 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 MYH2Q9UKX2 1941 aa21.06■□□□□ 0.96
EIF4A1-216ENST00000580888 SALL1Q9NSC2 1324 aa21.05■□□□□ 0.96
EIF4A1-216ENST00000580888 CDAN1Q8IWY9 1227 aa21.05■□□□□ 0.96
EIF4A1-216ENST00000580888 MAGEB6Q8N7X4 407 aa21.05■□□□□ 0.96
EIF4A1-216ENST00000580888 TESPA1A2RU30 521 aaPredicted RBP21.04■□□□□ 0.96
EIF4A1-216ENST00000580888 PATL2C9JE40 543 aaKnown RBP21.04■□□□□ 0.96
EIF4A1-216ENST00000580888 BRD1O95696 1058 aa21.04■□□□□ 0.96
EIF4A1-216ENST00000580888 GJA5P36382 358 aa21.04■□□□□ 0.96
EIF4A1-216ENST00000580888 PKN2Q16513 984 aaKnown RBP21.04■□□□□ 0.96
EIF4A1-216ENST00000580888 IMMTQ16891 758 aaKnown RBP21.04■□□□□ 0.96
EIF4A1-216ENST00000580888 NOL8Q76FK4 1167 aaKnown RBP21.04■□□□□ 0.96
EIF4A1-216ENST00000580888 IFNL1Q8IU54 200 aa21.04■□□□□ 0.96
EIF4A1-216ENST00000580888 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.04■□□□□ 0.96
EIF4A1-216ENST00000580888 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.03■□□□□ 0.96
EIF4A1-216ENST00000580888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.03■□□□□ 0.96
EIF4A1-216ENST00000580888 TMOD2Q9NZR1 351 aa21.03■□□□□ 0.96
EIF4A1-216ENST00000580888 WDR19Q8NEZ3 1342 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms