RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 CHPF2Q9P2E5 772 aa3.12□□□□□ -1.91
SNORD53-201ENST00000579969 DDX20Q9UHI6 824 aaKnown RBP3.12□□□□□ -1.91
SNORD53-201ENST00000579969 PNMA3Q9UL41 463 aa3.12□□□□□ -1.91
SNORD53-201ENST00000579969 DAGLAQ9Y4D2 1042 aa3.12□□□□□ -1.91
SNORD53-201ENST00000579969 OTOFQ9HC10 1997 aa3.12□□□□□ -1.91
SNORD53-201ENST00000579969 ATRXP46100 2492 aa3.12□□□□□ -1.91
SNORD53-201ENST00000579969 RPAP1Q9BWH6 1393 aaPredicted RBP3.12□□□□□ -1.91
SNORD53-201ENST00000579969 EPG5Q9HCE0 2579 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 FAM186AA6NE01 2351 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 POTEB3A0JP26 581 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 TRIM75PA6NK02 468 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 PHF20L1A8MW92 1017 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 KBTBD13C9JR72 458 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 RFXAPO00287 272 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 PER1O15534 1290 aaPredicted RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 GTPBP6O43824 516 aaPredicted RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 MYCNP04198 464 aaPredicted RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 CLTBP09497 229 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 POU3F3P20264 500 aaPredicted RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 ITGA6P23229 1130 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 SSTR3P32745 418 aaPredicted RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 RGS2P41220 211 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 ADCYAP1R1P41586 468 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 PTPN5P54829 565 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 TCP10Q12799 353 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 PABPC4Q13310 644 aaKnown RBP eCLIP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 RAB30Q15771 203 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 GRIK5Q16478 980 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 Q3C1V9 767 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 TMEM240Q5SV17 173 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 TREML2Q5T2D2 321 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 RASIP1Q5U651 963 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 C1orf53Q5VUE5 145 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 APOBEC3HQ6NTF7 200 aaKnown RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 CCDC174Q6PII3 467 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 POTEBQ6S5H4 581 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 HFE2Q6ZVN8 426 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 ZNF365Q70YC5 407 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 FAM178BQ8IXR5 827 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 SLC44A5Q8NCS7 719 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 GPRC5AQ8NFJ5 357 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 SOCS4Q8WXH5 440 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 TEKT1Q969V4 418 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 ZDHHC15Q96MV8 337 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 ASCC2Q9H1I8 757 aaPredicted RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 BABAM1Q9NWV8 329 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 HYPKQ9NX55 129 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 DBF4Q9UBU7 674 aaPredicted RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 MORF4L1Q9UBU8 362 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 AGTPBP1Q9UPW5 1226 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 GTF3C3Q9Y5Q9 886 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 LRRFIP2Q9Y608 721 aaKnown RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 MTCH2Q9Y6C9 303 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 MYBBP1AQ9BQG0 1328 aaKnown RBP3.11□□□□□ -1.91
SNORD53-201ENST00000579969 CLSPNQ9HAW4 1339 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 PLXNA1Q9UIW2 1896 aa3.11□□□□□ -1.91
SNORD53-201ENST00000579969 ZNF318Q5VUA4 2279 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 BRWD1Q9NSI6 2320 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 CACNA1HO95180 2353 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 C5orf42Q9H799 3197 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 DCXO43602 365 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 PLIN1O60240 522 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 PEX10O60683 326 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 CTNND1O60716 968 aaKnown RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 PQBP1O60828 265 aaKnown RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 TIMP1P01033 207 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 HMGB1P09429 215 aaKnown RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 ACRP10323 421 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 SLC5A1P13866 664 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 CDK11BP21127 795 aaKnown RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 MAPK4P31152 587 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 HIBADHP31937 336 aaKnown RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 ID4P47928 161 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 ATP2B2Q01814 1243 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 GOLGA2Q08379 1002 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 SPP2Q13103 211 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 MAP2K5Q13163 448 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 PPIGQ13427 754 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 NFE2L2Q16236 605 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 KRT24Q2M2I5 525 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 MORN1Q5T089 497 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 IER5LQ5T953 404 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 HDGFL1Q5TGJ6 251 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 ANO1Q5XXA6 986 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 KRT40Q6A162 431 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 MFSD5Q6N075 450 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 PLEKHH3Q7Z736 793 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 ZFPM1Q8IX07 1006 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 SCYL3Q8IZE3 742 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 PROCA1Q8NCQ7 364 aaPredicted RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 PRSS33Q8NF86 280 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 FAM84BQ96KN1 310 aaPredicted RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 PRRX2Q99811 253 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 METTL22Q9BUU2 404 aaPredicted RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 SPINK5Q9NQ38 1064 aaPredicted RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 RBPJLQ9UBG7 517 aa3.1□□□□□ -1.91
SNORD53-201ENST00000579969 YBX2Q9Y2T7 364 aaKnown RBP3.1□□□□□ -1.91
SNORD53-201ENST00000579969 ECM29Q5VYK3 1845 aa3.09□□□□□ -1.91
SNORD53-201ENST00000579969 AK9Q5TCS8 1911 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms