RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 FAM198AQ9UFP1 575 aa12.36□□□□□ -0.43
NDC80-204ENST00000575515 AGTPBP1Q9UPW5 1226 aa12.36□□□□□ -0.43
NDC80-204ENST00000575515 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
NDC80-204ENST00000575515 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
NDC80-204ENST00000575515 PFASO15067 1338 aa12.36□□□□□ -0.43
NDC80-204ENST00000575515 LTBP2Q14767 1821 aa12.35□□□□□ -0.43
NDC80-204ENST00000575515 PDE8BO95263 885 aa12.35□□□□□ -0.43
NDC80-204ENST00000575515 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
NDC80-204ENST00000575515 FAM109BQ6ICB4 259 aaPredicted RBP12.35□□□□□ -0.43
NDC80-204ENST00000575515 SLC4A10Q6U841 1118 aa12.35□□□□□ -0.43
NDC80-204ENST00000575515 ARHGAP45Q92619 1136 aa12.35□□□□□ -0.43
NDC80-204ENST00000575515 SUCLG2Q96I99 432 aa12.35□□□□□ -0.43
NDC80-204ENST00000575515 CHMP4BQ9H444 224 aaKnown RBP12.35□□□□□ -0.43
NDC80-204ENST00000575515 USP40Q9NVE5 1235 aa12.35□□□□□ -0.43
NDC80-204ENST00000575515 OGDHLQ9ULD0 1010 aa12.35□□□□□ -0.43
NDC80-204ENST00000575515 DDX19BQ9UMR2 479 aa12.35□□□□□ -0.43
NDC80-204ENST00000575515 COL2A1P02458 1487 aaPredicted RBP12.34□□□□□ -0.43
NDC80-204ENST00000575515 ATRNL1Q5VV63 1379 aa12.34□□□□□ -0.43
NDC80-204ENST00000575515 PHF20L1A8MW92 1017 aa12.34□□□□□ -0.43
NDC80-204ENST00000575515 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
NDC80-204ENST00000575515 IFIT1P09914 478 aaKnown RBP12.34□□□□□ -0.43
NDC80-204ENST00000575515 TREML2Q5T2D2 321 aa12.34□□□□□ -0.43
NDC80-204ENST00000575515 CCDC84Q86UT8 332 aaPredicted RBP12.34□□□□□ -0.43
NDC80-204ENST00000575515 ZFPM1Q8IX07 1006 aa12.34□□□□□ -0.43
NDC80-204ENST00000575515 MAFAQ8NHW3 353 aaPredicted RBP12.34□□□□□ -0.43
NDC80-204ENST00000575515 LBHD1Q9BQE6 289 aaPredicted RBP12.34□□□□□ -0.43
NDC80-204ENST00000575515 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.34□□□□□ -0.43
NDC80-204ENST00000575515 ALDH1L1O75891 902 aa12.33□□□□□ -0.44
NDC80-204ENST00000575515 LDHBP07195 334 aaKnown RBP12.33□□□□□ -0.44
NDC80-204ENST00000575515 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
NDC80-204ENST00000575515 PRDX5P30044 214 aa12.33□□□□□ -0.44
NDC80-204ENST00000575515 GCLCP48506 637 aaPredicted RBP12.33□□□□□ -0.44
NDC80-204ENST00000575515 RGS3P49796 1198 aa12.33□□□□□ -0.44
NDC80-204ENST00000575515 PUM3Q15397 648 aaKnown RBP12.33□□□□□ -0.44
NDC80-204ENST00000575515 TMEM57Q8N5G2 664 aa12.33□□□□□ -0.44
NDC80-204ENST00000575515 VGLL2Q8N8G2 317 aa12.33□□□□□ -0.44
NDC80-204ENST00000575515 TRIB2Q92519 343 aa12.33□□□□□ -0.44
NDC80-204ENST00000575515 SRCIN1Q9C0H9 1055 aa12.33□□□□□ -0.44
NDC80-204ENST00000575515 CTNND1O60716 968 aaKnown RBP12.32□□□□□ -0.44
NDC80-204ENST00000575515 SLC5A1P13866 664 aa12.32□□□□□ -0.44
NDC80-204ENST00000575515 CYP2B6P20813 491 aa12.32□□□□□ -0.44
NDC80-204ENST00000575515 PABPC4Q13310 644 aaKnown RBP eCLIP12.32□□□□□ -0.44
NDC80-204ENST00000575515 LRRC26Q2I0M4 334 aa12.32□□□□□ -0.44
NDC80-204ENST00000575515 BICC1Q9H694 974 aaKnown RBP12.32□□□□□ -0.44
NDC80-204ENST00000575515 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
NDC80-204ENST00000575515 PTPRCP08575 1304 aa12.32□□□□□ -0.44
NDC80-204ENST00000575515 ENTPD3O75355 529 aa12.31□□□□□ -0.44
NDC80-204ENST00000575515 PROCA1Q8NCQ7 364 aaPredicted RBP12.31□□□□□ -0.44
NDC80-204ENST00000575515 KAZALD1Q96I82 304 aa12.31□□□□□ -0.44
NDC80-204ENST00000575515 CDX2Q99626 313 aaPredicted RBP12.31□□□□□ -0.44
NDC80-204ENST00000575515 GJD2Q9UKL4 321 aa12.31□□□□□ -0.44
NDC80-204ENST00000575515 EYSQ5T1H1 3165 aa12.3□□□□□ -0.44
NDC80-204ENST00000575515 NBPF7P0C2Y1 421 aaPredicted RBP12.3□□□□□ -0.44
NDC80-204ENST00000575515 SLURP2P0DP57 97 aa12.3□□□□□ -0.44
NDC80-204ENST00000575515 COL6A1P12109 1028 aa12.3□□□□□ -0.44
NDC80-204ENST00000575515 ZKSCAN1P17029 563 aaPredicted RBP12.3□□□□□ -0.44
NDC80-204ENST00000575515 COL9A1P20849 921 aa12.3□□□□□ -0.44
NDC80-204ENST00000575515 PICALMQ13492 652 aa12.3□□□□□ -0.44
NDC80-204ENST00000575515 MAP3K21Q5TCX8 1036 aa12.3□□□□□ -0.44
NDC80-204ENST00000575515 KLHDC4Q8TBB5 520 aa12.3□□□□□ -0.44
NDC80-204ENST00000575515 SYMPKQ92797 1274 aaKnown RBP12.3□□□□□ -0.44
NDC80-204ENST00000575515 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
NDC80-204ENST00000575515 PRKAG2Q9UGJ0 569 aa12.3□□□□□ -0.44
NDC80-204ENST00000575515 LAMA2P24043 3122 aaKnown RBP12.29□□□□□ -0.44
NDC80-204ENST00000575515 DDTLA6NHG4 134 aaPredicted RBP12.29□□□□□ -0.44
NDC80-204ENST00000575515 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
NDC80-204ENST00000575515 HMGCS2P54868 508 aa12.29□□□□□ -0.44
NDC80-204ENST00000575515 SPP2Q13103 211 aa12.29□□□□□ -0.44
NDC80-204ENST00000575515 SH3BP5LQ7L8J4 393 aa12.29□□□□□ -0.44
NDC80-204ENST00000575515 SOCS4Q8WXH5 440 aa12.29□□□□□ -0.44
NDC80-204ENST00000575515 MYLIPQ8WY64 445 aa12.29□□□□□ -0.44
NDC80-204ENST00000575515 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
NDC80-204ENST00000575515 IDI2Q9BXS1 227 aa12.29□□□□□ -0.44
NDC80-204ENST00000575515 ASCC2Q9H1I8 757 aaPredicted RBP12.29□□□□□ -0.44
NDC80-204ENST00000575515 GNL3LQ9NVN8 582 aaKnown RBP12.29□□□□□ -0.44
NDC80-204ENST00000575515 RFX7Q2KHR2 1363 aa12.29□□□□□ -0.44
NDC80-204ENST00000575515 FAM196BA6NMK8 535 aa12.28□□□□□ -0.44
NDC80-204ENST00000575515 FGFR2P21802 821 aa12.28□□□□□ -0.44
NDC80-204ENST00000575515 CCND3P30281 292 aaPredicted RBP12.28□□□□□ -0.44
NDC80-204ENST00000575515 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
NDC80-204ENST00000575515 RABL6Q3YEC7 729 aaPredicted RBP12.28□□□□□ -0.44
NDC80-204ENST00000575515 DZIP1Q86YF9 867 aaKnown RBP12.28□□□□□ -0.44
NDC80-204ENST00000575515 CCAR1Q8IX12 1150 aaKnown RBP12.28□□□□□ -0.44
NDC80-204ENST00000575515 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
NDC80-204ENST00000575515 ZNF280CQ8ND82 737 aa12.28□□□□□ -0.44
NDC80-204ENST00000575515 LPIN2Q92539 896 aa12.28□□□□□ -0.44
NDC80-204ENST00000575515 SENP6Q9GZR1 1112 aaPredicted RBP12.28□□□□□ -0.44
NDC80-204ENST00000575515 RLFQ13129 1914 aa12.28□□□□□ -0.44
NDC80-204ENST00000575515 VCANP13611 3396 aa12.28□□□□□ -0.44
NDC80-204ENST00000575515 FOSL2P15408 326 aa12.27□□□□□ -0.45
NDC80-204ENST00000575515 CACNB2Q08289 660 aaPredicted RBP12.27□□□□□ -0.45
NDC80-204ENST00000575515 ANKRD44Q8N8A2 993 aa12.27□□□□□ -0.45
NDC80-204ENST00000575515 SEMA6BQ9H3T3 888 aa12.27□□□□□ -0.45
NDC80-204ENST00000575515 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.27□□□□□ -0.45
NDC80-204ENST00000575515 CWC22Q9HCG8 908 aaKnown RBP12.27□□□□□ -0.45
NDC80-204ENST00000575515 DDX4Q9NQI0 724 aaKnown RBP12.27□□□□□ -0.45
NDC80-204ENST00000575515 PCDHB15Q9Y5E8 787 aa12.27□□□□□ -0.45
NDC80-204ENST00000575515 PRUNE2Q8WUY3 3088 aa12.27□□□□□ -0.45
NDC80-204ENST00000575515 DNAH12Q6ZR08 3092 aa12.26□□□□□ -0.45
NDC80-204ENST00000575515 TTC28Q96AY4 2481 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms