RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TRHP20396 242 aaPredicted RBP19.99■□□□□ 0.79
SCARF1-205ENST00000571272 MTF1Q14872 753 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 RGS22Q8NE09 1264 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 MED15Q96RN5 788 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 IRX2Q9BZI1 471 aaPredicted RBP19.99■□□□□ 0.79
SCARF1-205ENST00000571272 PRDM11Q9NQV5 511 aa19.99■□□□□ 0.79
SCARF1-205ENST00000571272 FBXO2Q9UK22 296 aaPredicted RBP19.99■□□□□ 0.79
SCARF1-205ENST00000571272 ANKRD18BA2A2Z9 1011 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 ZBTB22O15209 634 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 MYO1BO43795 1136 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 SASH3O75995 380 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 FMNL1O95466 1100 aaPredicted RBP19.98■□□□□ 0.79
SCARF1-205ENST00000571272 MMP1P03956 469 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 ZNF18P17022 549 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 MAP3K9P80192 1104 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 PPP2R3AQ06190 1150 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 IFNL3Q8IZI9 196 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 ZCCHC17Q9NP64 241 aaKnown RBP19.98■□□□□ 0.79
SCARF1-205ENST00000571272 SEC31BQ9NQW1 1179 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 SNAP23O00161 211 aa19.98■□□□□ 0.79
SCARF1-205ENST00000571272 TCRBV5S4A2TA0A5A2 114 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 MBD4O95243 580 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 PTPREP23469 700 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 CCDC34Q96HJ3 373 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 ZSWIM4Q9H7M6 989 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 ARMT1Q9H993 441 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 ADAMTSL3P82987 1691 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 A0A0U1RQG5 324 aaPredicted RBP19.97■□□□□ 0.79
SCARF1-205ENST00000571272 PDE8BO95263 885 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 CYP2C19P33261 490 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 MAGEB6Q8N7X4 407 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 MRFAP1Q9Y605 127 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 IFNAR1P17181 557 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 LIFRP42702 1097 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 VGLL2Q8N8G2 317 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 MLKLQ8NB16 471 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 ENOX1Q8TC92 643 aaKnown RBP19.97■□□□□ 0.79
SCARF1-205ENST00000571272 DHX58Q96C10 678 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 ASAP1Q9ULH1 1129 aa19.97■□□□□ 0.79
SCARF1-205ENST00000571272 PRKAB2O43741 272 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 TBC1D8O95759 1140 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 TPM1P09493 284 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 MORC3Q14149 939 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 OXER1Q8TDS5 423 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 CPLX3Q8WVH0 158 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 RAI14Q9P0K7 980 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 ZNF142P52746 1687 aaPredicted RBP19.96■□□□□ 0.79
SCARF1-205ENST00000571272 TNS3Q68CZ2 1445 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 PATL2C9JE40 543 aaKnown RBP19.96■□□□□ 0.79
SCARF1-205ENST00000571272 CTSWP56202 376 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 KLHL10Q6JEL2 608 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 CC2D1AQ6P1N0 951 aaPredicted RBP19.96■□□□□ 0.79
SCARF1-205ENST00000571272 TRIM22Q8IYM9 498 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 CCDC12Q8WUD4 166 aaPredicted RBP19.96■□□□□ 0.79
SCARF1-205ENST00000571272 NUP133Q8WUM0 1156 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 KIFC2Q96AC6 838 aa19.96■□□□□ 0.79
SCARF1-205ENST00000571272 MRPL44Q9H9J2 332 aaKnown RBP19.96■□□□□ 0.79
SCARF1-205ENST00000571272 GOLGA6L9A6NEM1 432 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 SOWAHDA6NJG2 315 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 TEX33O43247 280 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 SARSP49591 514 aaKnown RBP19.95■□□□□ 0.78
SCARF1-205ENST00000571272 RTN1Q16799 776 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 NLRP10Q86W26 655 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 WASF1Q92558 559 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 LZTFL1Q9NQ48 299 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 SPATA31A3Q5VYP0 1347 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 IRS4O14654 1257 aaPredicted RBP19.95■□□□□ 0.78
SCARF1-205ENST00000571272 STX17P56962 302 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 MFSD6Q6ZSS7 791 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 NUTM2AQ8IVF1 878 aaPredicted RBP19.95■□□□□ 0.78
SCARF1-205ENST00000571272 PARD6BQ9BYG5 372 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 TMOD3Q9NYL9 352 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 DACH1Q9UI36 760 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 STK36Q9NRP7 1315 aa19.95■□□□□ 0.78
SCARF1-205ENST00000571272 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 A0A0U1RQJ8 604 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 CASP1P29466 404 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 RILPL1Q5EBL4 403 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 AKNAD1Q5T1N1 836 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 GIGYF2Q6Y7W6 1299 aaKnown RBP19.94■□□□□ 0.78
SCARF1-205ENST00000571272 GPR161Q8N6U8 529 aaKnown RBP19.94■□□□□ 0.78
SCARF1-205ENST00000571272 ATRIPQ8WXE1 791 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 ZNF512BQ96KM6 892 aaPredicted RBP19.94■□□□□ 0.78
SCARF1-205ENST00000571272 TEX13AQ9BXU3 409 aaPredicted RBP19.94■□□□□ 0.78
SCARF1-205ENST00000571272 CSRNP2Q9H175 543 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 CABP5Q9NP86 173 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 STRN4Q9NRL3 753 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 ATRNO75882 1429 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 ECM29Q5VYK3 1845 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 IL2RBP14784 551 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 NKX1-1Q15270 411 aaPredicted RBP19.94■□□□□ 0.78
SCARF1-205ENST00000571272 NT5DC1Q5TFE4 455 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 ZBTB9Q96C00 473 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.94■□□□□ 0.78
SCARF1-205ENST00000571272 TRMT112Q9UI30 125 aaKnown RBP19.94■□□□□ 0.78
SCARF1-205ENST00000571272 UBR2Q8IWV8 1755 aa19.94■□□□□ 0.78
SCARF1-205ENST00000571272 AFMP43652 599 aa19.93■□□□□ 0.78
SCARF1-205ENST00000571272 NR1I3Q14994 352 aa19.93■□□□□ 0.78
SCARF1-205ENST00000571272 ACTN4O43707 911 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms