RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 ZNF384Q8TF68 577 aa18.97■□□□□ 0.63
PKD1-236ENST00000568796 NSUN4Q96CB9 384 aaKnown RBP18.97■□□□□ 0.63
PKD1-236ENST00000568796 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.97■□□□□ 0.63
PKD1-236ENST00000568796 ZBTB7BO15156 539 aaPredicted RBP18.96■□□□□ 0.63
PKD1-236ENST00000568796 HMGCS2P54868 508 aa18.96■□□□□ 0.63
PKD1-236ENST00000568796 G3BP1Q13283 466 aaKnown RBP eCLIP18.96■□□□□ 0.63
PKD1-236ENST00000568796 FAM110CQ1W6H9 321 aa18.96■□□□□ 0.63
PKD1-236ENST00000568796 TEX11Q8IYF3 940 aa18.96■□□□□ 0.63
PKD1-236ENST00000568796 PROCA1Q8NCQ7 364 aaPredicted RBP18.96■□□□□ 0.63
PKD1-236ENST00000568796 ZNF280CQ8ND82 737 aa18.96■□□□□ 0.63
PKD1-236ENST00000568796 NOL10Q9BSC4 688 aaKnown RBP18.96■□□□□ 0.63
PKD1-236ENST00000568796 LRP2BPQ9P2M1 347 aa18.96■□□□□ 0.63
PKD1-236ENST00000568796 NPM3O75607 178 aaKnown RBP18.95■□□□□ 0.62
PKD1-236ENST00000568796 PABPC4Q13310 644 aaKnown RBP eCLIP18.95■□□□□ 0.62
PKD1-236ENST00000568796 ARHGAP45Q92619 1136 aa18.95■□□□□ 0.62
PKD1-236ENST00000568796 PTPRFP10586 1907 aa18.95■□□□□ 0.62
PKD1-236ENST00000568796 USP17L5A8MUK1 530 aa18.94■□□□□ 0.62
PKD1-236ENST00000568796 MAP4K4O95819 1239 aaPredicted RBP18.94■□□□□ 0.62
PKD1-236ENST00000568796 CAP2P40123 477 aa18.94■□□□□ 0.62
PKD1-236ENST00000568796 GCLCP48506 637 aaPredicted RBP18.94■□□□□ 0.62
PKD1-236ENST00000568796 MTX1Q13505 466 aa18.94■□□□□ 0.62
PKD1-236ENST00000568796 TBC1D2Q9BYX2 928 aa18.94■□□□□ 0.62
PKD1-236ENST00000568796 PHIPQ8WWQ0 1821 aa18.94■□□□□ 0.62
PKD1-236ENST00000568796 DOCK3Q8IZD9 2030 aa18.94■□□□□ 0.62
PKD1-236ENST00000568796 GNAI2P04899 355 aa18.93■□□□□ 0.62
PKD1-236ENST00000568796 SH3RF3Q8TEJ3 882 aaPredicted RBP18.93■□□□□ 0.62
PKD1-236ENST00000568796 PAWRQ96IZ0 340 aaKnown RBP18.93■□□□□ 0.62
PKD1-236ENST00000568796 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.93■□□□□ 0.62
PKD1-236ENST00000568796 AS3MTQ9HBK9 375 aa18.93■□□□□ 0.62
PKD1-236ENST00000568796 PAK6Q9NQU5 681 aaPredicted RBP18.93■□□□□ 0.62
PKD1-236ENST00000568796 IPO8O15397 1037 aaKnown RBP18.92■□□□□ 0.62
PKD1-236ENST00000568796 UQCRFS1P1P0C7P4 283 aa18.92■□□□□ 0.62
PKD1-236ENST00000568796 CAPN2P17655 700 aa18.92■□□□□ 0.62
PKD1-236ENST00000568796 ARID4AP29374 1257 aaPredicted RBP18.92■□□□□ 0.62
PKD1-236ENST00000568796 MCAMP43121 646 aa18.92■□□□□ 0.62
PKD1-236ENST00000568796 RRP1BQ14684 758 aaKnown RBP18.92■□□□□ 0.62
PKD1-236ENST00000568796 FRAT1Q92837 279 aaPredicted RBP18.92■□□□□ 0.62
PKD1-236ENST00000568796 ASCC2Q9H1I8 757 aaPredicted RBP18.92■□□□□ 0.62
PKD1-236ENST00000568796 RANBP2P49792 3224 aaKnown RBP18.91■□□□□ 0.62
PKD1-236ENST00000568796 BAG3O95817 575 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 HMGCRP04035 888 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 TTC39AQ5SRH9 613 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 NAA16Q6N069 864 aaPredicted RBP18.91■□□□□ 0.62
PKD1-236ENST00000568796 NECAB2Q7Z6G3 386 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 TRIM34Q9BYJ4 488 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 CRISPLD2Q9H0B8 497 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 SNRKQ9NRH2 765 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 AATFQ9NY61 560 aaKnown RBP eCLIP18.91■□□□□ 0.62
PKD1-236ENST00000568796 TMOD4Q9NZQ9 345 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 PI4KBQ9UBF8 816 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 HERC5Q9UII4 1024 aaKnown RBP18.91■□□□□ 0.62
PKD1-236ENST00000568796 SZT2Q5T011 3432 aa18.91■□□□□ 0.62
PKD1-236ENST00000568796 PNMA6EA0A0J9YXQ4 647 aa18.9■□□□□ 0.62
PKD1-236ENST00000568796 IRX3P78415 501 aaPredicted RBP18.9■□□□□ 0.62
PKD1-236ENST00000568796 MTMR2Q13614 643 aa18.9■□□□□ 0.62
PKD1-236ENST00000568796 DIS3LQ8TF46 1054 aaKnown RBP18.9■□□□□ 0.62
PKD1-236ENST00000568796 CLUAP1Q96AJ1 413 aa18.9■□□□□ 0.62
PKD1-236ENST00000568796 PRO3102Q9H379 93 aa18.9■□□□□ 0.62
PKD1-236ENST00000568796 TNNQ9UQP3 1299 aa18.9■□□□□ 0.62
PKD1-236ENST00000568796 TRIM27P14373 513 aa18.89■□□□□ 0.61
PKD1-236ENST00000568796 OS9Q13438 667 aaPredicted RBP18.89■□□□□ 0.61
PKD1-236ENST00000568796 MAPKAPK5Q8IW41 473 aa18.89■□□□□ 0.61
PKD1-236ENST00000568796 CRACR2BQ8N4Y2 399 aaPredicted RBP18.89■□□□□ 0.61
PKD1-236ENST00000568796 TGFBRAP1Q8WUH2 860 aa18.89■□□□□ 0.61
PKD1-236ENST00000568796 DHX36Q9H2U1 1008 aaKnown RBP18.89■□□□□ 0.61
PKD1-236ENST00000568796 HMX1Q9NP08 348 aaPredicted RBP18.89■□□□□ 0.61
PKD1-236ENST00000568796 STAP2Q9UGK3 403 aa18.89■□□□□ 0.61
PKD1-236ENST00000568796 COL2A1P02458 1487 aaPredicted RBP18.89■□□□□ 0.61
PKD1-236ENST00000568796 PLCG2P16885 1265 aa18.88■□□□□ 0.61
PKD1-236ENST00000568796 CYP2B6P20813 491 aa18.88■□□□□ 0.61
PKD1-236ENST00000568796 TRIM32Q13049 653 aa18.88■□□□□ 0.61
PKD1-236ENST00000568796 SH3D19Q5HYK7 790 aa18.88■□□□□ 0.61
PKD1-236ENST00000568796 CCDC158Q5M9N0 1113 aa18.88■□□□□ 0.61
PKD1-236ENST00000568796 ATF7IPQ6VMQ6 1270 aa18.88■□□□□ 0.61
PKD1-236ENST00000568796 GJD2Q9UKL4 321 aa18.88■□□□□ 0.61
PKD1-236ENST00000568796 RPTORQ8N122 1335 aa18.88■□□□□ 0.61
PKD1-236ENST00000568796 ASNSP08243 561 aa18.87■□□□□ 0.61
PKD1-236ENST00000568796 BACE1P56817 501 aa18.87■□□□□ 0.61
PKD1-236ENST00000568796 C7orf61Q8IZ16 206 aa18.87■□□□□ 0.61
PKD1-236ENST00000568796 ATAD5Q96QE3 1844 aa18.86■□□□□ 0.61
PKD1-236ENST00000568796 BCAR3O75815 825 aa18.86■□□□□ 0.61
PKD1-236ENST00000568796 GDF11O95390 407 aa18.86■□□□□ 0.61
PKD1-236ENST00000568796 CCAR1Q8IX12 1150 aaKnown RBP18.86■□□□□ 0.61
PKD1-236ENST00000568796 ANKLE1Q8NAG6 615 aa18.86■□□□□ 0.61
PKD1-236ENST00000568796 P2RX7Q99572 595 aaKnown RBP18.86■□□□□ 0.61
PKD1-236ENST00000568796 DBNDD2Q9BQY9 259 aa18.86■□□□□ 0.61
PKD1-236ENST00000568796 WDR18Q9BV38 432 aa18.86■□□□□ 0.61
PKD1-236ENST00000568796 PALD1Q9ULE6 856 aa18.86■□□□□ 0.61
PKD1-236ENST00000568796 ZMYND8Q9ULU4 1186 aaPredicted RBP18.86■□□□□ 0.61
PKD1-236ENST00000568796 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
PKD1-236ENST00000568796 FLT1P17948 1338 aa18.85■□□□□ 0.61
PKD1-236ENST00000568796 A0A1W2PPC1 479 aa18.85■□□□□ 0.61
PKD1-236ENST00000568796 PEX10O60683 326 aa18.85■□□□□ 0.61
PKD1-236ENST00000568796 TNNI3KQ59H18 835 aa18.85■□□□□ 0.61
PKD1-236ENST00000568796 FOXP4Q8IVH2 680 aaPredicted RBP18.85■□□□□ 0.61
PKD1-236ENST00000568796 GPRC5AQ8NFJ5 357 aa18.85■□□□□ 0.61
PKD1-236ENST00000568796 NUDT12Q9BQG2 462 aa18.85■□□□□ 0.61
PKD1-236ENST00000568796 NBPF3Q9H094 633 aa18.85■□□□□ 0.61
PKD1-236ENST00000568796 MORF4L1Q9UBU8 362 aa18.85■□□□□ 0.61
PKD1-236ENST00000568796 SAP30BPQ9UHR5 308 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms