RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 TREML2Q5T2D2 321 aa23.16■■□□□ 1.3
ABCA3-204ENST00000566200 SH3RF3Q8TEJ3 882 aaPredicted RBP23.16■■□□□ 1.3
ABCA3-204ENST00000566200 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
ABCA3-204ENST00000566200 LRP2BPQ9P2M1 347 aa23.16■■□□□ 1.3
ABCA3-204ENST00000566200 AGTPBP1Q9UPW5 1226 aa23.16■■□□□ 1.3
ABCA3-204ENST00000566200 ATP8B2P98198 1209 aa23.15■■□□□ 1.3
ABCA3-204ENST00000566200 ADGRA1Q86SQ6 560 aa23.15■■□□□ 1.3
ABCA3-204ENST00000566200 TEX11Q8IYF3 940 aa23.15■■□□□ 1.3
ABCA3-204ENST00000566200 CCL5P13501 91 aa23.14■■□□□ 1.29
ABCA3-204ENST00000566200 CYP2E1P05181 493 aaPredicted RBP23.13■■□□□ 1.29
ABCA3-204ENST00000566200 RLBP1P12271 317 aa23.13■■□□□ 1.29
ABCA3-204ENST00000566200 CAP2P40123 477 aa23.13■■□□□ 1.29
ABCA3-204ENST00000566200 SPP2Q13103 211 aa23.13■■□□□ 1.29
ABCA3-204ENST00000566200 UBE2Q1Q7Z7E8 422 aa23.13■■□□□ 1.29
ABCA3-204ENST00000566200 GJB1P08034 283 aa23.12■■□□□ 1.29
ABCA3-204ENST00000566200 GJA8P48165 433 aa23.12■■□□□ 1.29
ABCA3-204ENST00000566200 FLT3LGP49771 235 aa23.12■■□□□ 1.29
ABCA3-204ENST00000566200 TTC39AQ5SRH9 613 aa23.12■■□□□ 1.29
ABCA3-204ENST00000566200 DOCK3Q8IZD9 2030 aa23.12■■□□□ 1.29
ABCA3-204ENST00000566200 PROCA1Q8NCQ7 364 aaPredicted RBP23.12■■□□□ 1.29
ABCA3-204ENST00000566200 SLAIN1Q8ND83 568 aa23.12■■□□□ 1.29
ABCA3-204ENST00000566200 SMCR8Q8TEV9 937 aaPredicted RBP23.12■■□□□ 1.29
ABCA3-204ENST00000566200 AATFQ9NY61 560 aaKnown RBP eCLIP23.12■■□□□ 1.29
ABCA3-204ENST00000566200 ZBTB7BO15156 539 aaPredicted RBP23.11■■□□□ 1.29
ABCA3-204ENST00000566200 SURF6O75683 361 aaKnown RBP23.11■■□□□ 1.29
ABCA3-204ENST00000566200 JAG1P78504 1218 aa23.11■■□□□ 1.29
ABCA3-204ENST00000566200 NAA16Q6N069 864 aaPredicted RBP23.11■■□□□ 1.29
ABCA3-204ENST00000566200 ANKRD13CQ8N6S4 541 aa23.11■■□□□ 1.29
ABCA3-204ENST00000566200 ZNF280CQ8ND82 737 aa23.11■■□□□ 1.29
ABCA3-204ENST00000566200 ZNF512BQ96KM6 892 aaPredicted RBP23.11■■□□□ 1.29
ABCA3-204ENST00000566200 DNAJC18Q9H819 358 aa23.11■■□□□ 1.29
ABCA3-204ENST00000566200 TLR7Q9NYK1 1049 aaKnown RBP23.11■■□□□ 1.29
ABCA3-204ENST00000566200 HERC5Q9UII4 1024 aaKnown RBP23.11■■□□□ 1.29
ABCA3-204ENST00000566200 DBNLQ9UJU6 430 aaKnown RBP23.11■■□□□ 1.29
ABCA3-204ENST00000566200 NOP58Q9Y2X3 529 aaKnown RBP23.11■■□□□ 1.29
ABCA3-204ENST00000566200 H0YGN5 161 aa23.1■■□□□ 1.29
ABCA3-204ENST00000566200 ADCY3O60266 1144 aa23.1■■□□□ 1.29
ABCA3-204ENST00000566200 ELNP15502 786 aa23.1■■□□□ 1.29
ABCA3-204ENST00000566200 ZAP70P43403 619 aa23.1■■□□□ 1.29
ABCA3-204ENST00000566200 PPP4CP60510 307 aa23.1■■□□□ 1.29
ABCA3-204ENST00000566200 OS9Q13438 667 aaPredicted RBP23.1■■□□□ 1.29
ABCA3-204ENST00000566200 CCDC158Q5M9N0 1113 aa23.1■■□□□ 1.29
ABCA3-204ENST00000566200 RNF208Q9H0X6 261 aa23.1■■□□□ 1.29
ABCA3-204ENST00000566200 UNC93B1Q9H1C4 597 aa23.1■■□□□ 1.29
ABCA3-204ENST00000566200 PIH1D3Q9NQM4 214 aaKnown RBP23.1■■□□□ 1.29
ABCA3-204ENST00000566200 BIN2Q9UBW5 565 aaPredicted RBP23.1■■□□□ 1.29
ABCA3-204ENST00000566200 COLQQ9Y215 455 aaPredicted RBP23.1■■□□□ 1.29
ABCA3-204ENST00000566200 TNPO2O14787 897 aaKnown RBP23.09■■□□□ 1.29
ABCA3-204ENST00000566200 HMGCS2P54868 508 aa23.09■■□□□ 1.29
ABCA3-204ENST00000566200 UBXN2AP68543 259 aa23.09■■□□□ 1.29
ABCA3-204ENST00000566200 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.29
ABCA3-204ENST00000566200 TGFBRAP1Q8WUH2 860 aa23.09■■□□□ 1.29
ABCA3-204ENST00000566200 PI4KBQ9UBF8 816 aa23.09■■□□□ 1.29
ABCA3-204ENST00000566200 FLT1P17948 1338 aa23.08■■□□□ 1.29
ABCA3-204ENST00000566200 USP17L5A8MUK1 530 aa23.08■■□□□ 1.29
ABCA3-204ENST00000566200 IRF5Q13568 498 aa23.08■■□□□ 1.29
ABCA3-204ENST00000566200 FAM110CQ1W6H9 321 aa23.08■■□□□ 1.29
ABCA3-204ENST00000566200 SHROOM1Q2M3G4 852 aaPredicted RBP23.08■■□□□ 1.29
ABCA3-204ENST00000566200 SH3D19Q5HYK7 790 aa23.08■■□□□ 1.29
ABCA3-204ENST00000566200 METTL16Q86W50 562 aaKnown RBP23.08■■□□□ 1.29
ABCA3-204ENST00000566200 MAPKAPK5Q8IW41 473 aa23.08■■□□□ 1.29
ABCA3-204ENST00000566200 NKX2-3Q8TAU0 364 aa23.08■■□□□ 1.29
ABCA3-204ENST00000566200 NOL10Q9BSC4 688 aaKnown RBP23.08■■□□□ 1.29
ABCA3-204ENST00000566200 TBC1D2Q9BYX2 928 aa23.08■■□□□ 1.29
ABCA3-204ENST00000566200 DHX36Q9H2U1 1008 aaKnown RBP23.08■■□□□ 1.29
ABCA3-204ENST00000566200 BAG3O95817 575 aa23.07■■□□□ 1.28
ABCA3-204ENST00000566200 ITPRIPQ8IWB1 547 aa23.07■■□□□ 1.28
ABCA3-204ENST00000566200 PXYLP1Q8TE99 480 aa23.07■■□□□ 1.28
ABCA3-204ENST00000566200 U2AF1L4Q8WU68 220 aaKnown RBP23.07■■□□□ 1.28
ABCA3-204ENST00000566200 EAF2Q96CJ1 260 aaPredicted RBP23.07■■□□□ 1.28
ABCA3-204ENST00000566200 PNMA3Q9UL41 463 aa23.07■■□□□ 1.28
ABCA3-204ENST00000566200 PLXNB2O15031 1838 aa23.07■■□□□ 1.28
ABCA3-204ENST00000566200 INHAP05111 366 aa23.06■■□□□ 1.28
ABCA3-204ENST00000566200 FXR1P51114 621 aaKnown RBP eCLIP23.06■■□□□ 1.28
ABCA3-204ENST00000566200 FTSJ3Q8IY81 847 aaKnown RBP23.06■■□□□ 1.28
ABCA3-204ENST00000566200 MIER1Q8N108 512 aa23.06■■□□□ 1.28
ABCA3-204ENST00000566200 CCDC8Q9H0W5 538 aaPredicted RBP23.06■■□□□ 1.28
ABCA3-204ENST00000566200 ASCC2Q9H1I8 757 aaPredicted RBP23.06■■□□□ 1.28
ABCA3-204ENST00000566200 PLCG2P16885 1265 aa23.05■■□□□ 1.28
ABCA3-204ENST00000566200 DYNLL1P63167 89 aaKnown RBP23.05■■□□□ 1.28
ABCA3-204ENST00000566200 WDR18Q9BV38 432 aa23.05■■□□□ 1.28
ABCA3-204ENST00000566200 PALD1Q9ULE6 856 aa23.05■■□□□ 1.28
ABCA3-204ENST00000566200 SGPL1O95470 568 aa23.04■■□□□ 1.28
ABCA3-204ENST00000566200 GCLCP48506 637 aaPredicted RBP23.04■■□□□ 1.28
ABCA3-204ENST00000566200 MTMR2Q13614 643 aa23.04■■□□□ 1.28
ABCA3-204ENST00000566200 AS3MTQ9HBK9 375 aa23.04■■□□□ 1.28
ABCA3-204ENST00000566200 MYH1P12882 1939 aa23.04■■□□□ 1.28
ABCA3-204ENST00000566200 CEP85Q6P2H3 762 aa23.03■■□□□ 1.28
ABCA3-204ENST00000566200 FOXP4Q8IVH2 680 aaPredicted RBP23.03■■□□□ 1.28
ABCA3-204ENST00000566200 COA7Q96BR5 231 aa23.03■■□□□ 1.28
ABCA3-204ENST00000566200 SAP30BPQ9UHR5 308 aaKnown RBP23.03■■□□□ 1.28
ABCA3-204ENST00000566200 NDUFB9Q9Y6M9 179 aa23.03■■□□□ 1.28
ABCA3-204ENST00000566200 IGSF3O75054 1194 aa23.02■■□□□ 1.28
ABCA3-204ENST00000566200 GDF11O95390 407 aa23.02■■□□□ 1.28
ABCA3-204ENST00000566200 ASNSP08243 561 aa23.02■■□□□ 1.28
ABCA3-204ENST00000566200 BACE1P56817 501 aa23.02■■□□□ 1.28
ABCA3-204ENST00000566200 PABPC4Q13310 644 aaKnown RBP eCLIP23.02■■□□□ 1.28
ABCA3-204ENST00000566200 DPF3Q92784 378 aa23.02■■□□□ 1.28
ABCA3-204ENST00000566200 PAK6Q9NQU5 681 aaPredicted RBP23.02■■□□□ 1.28
ABCA3-204ENST00000566200 GJD2Q9UKL4 321 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms