RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CHRDL2Q6WN34 429 aa25.7■■□□□ 1.7
HERC2-204ENST00000563945 PROCA1Q8NCQ7 364 aaPredicted RBP25.7■■□□□ 1.7
HERC2-204ENST00000563945 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.7■■□□□ 1.7
HERC2-204ENST00000563945 FARP2O94887 1054 aaPredicted RBP25.69■■□□□ 1.7
HERC2-204ENST00000563945 SGPL1O95470 568 aa25.69■■□□□ 1.7
HERC2-204ENST00000563945 BAG3O95817 575 aa25.69■■□□□ 1.7
HERC2-204ENST00000563945 ELNP15502 786 aa25.69■■□□□ 1.7
HERC2-204ENST00000563945 ARID4AP29374 1257 aaPredicted RBP25.69■■□□□ 1.7
HERC2-204ENST00000563945 IRF5Q13568 498 aa25.69■■□□□ 1.7
HERC2-204ENST00000563945 ATF7IPQ6VMQ6 1270 aa25.69■■□□□ 1.7
HERC2-204ENST00000563945 ZNF280CQ8ND82 737 aa25.69■■□□□ 1.7
HERC2-204ENST00000563945 AS3MTQ9HBK9 375 aa25.69■■□□□ 1.7
HERC2-204ENST00000563945 CCER2I3L3R5 266 aa25.68■■□□□ 1.7
HERC2-204ENST00000563945 INHAP05111 366 aa25.68■■□□□ 1.7
HERC2-204ENST00000563945 OS9Q13438 667 aaPredicted RBP25.68■■□□□ 1.7
HERC2-204ENST00000563945 CLUAP1Q96AJ1 413 aa25.68■■□□□ 1.7
HERC2-204ENST00000563945 MGAMO43451 1857 aa25.68■■□□□ 1.7
HERC2-204ENST00000563945 DOCK1Q14185 1865 aa25.68■■□□□ 1.7
HERC2-204ENST00000563945 BRCA2P51587 3418 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 USP17L5A8MUK1 530 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 TRIM27P14373 513 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 PLCG2P16885 1265 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 GCLCP48506 637 aaPredicted RBP25.67■■□□□ 1.7
HERC2-204ENST00000563945 FAM110CQ1W6H9 321 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 CCDC158Q5M9N0 1113 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 TTC39AQ5SRH9 613 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 TREML2Q5T2D2 321 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 ZNF384Q8TF68 577 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 TRIM34Q9BYJ4 488 aa25.67■■□□□ 1.7
HERC2-204ENST00000563945 HERC5Q9UII4 1024 aaKnown RBP25.67■■□□□ 1.7
HERC2-204ENST00000563945 PNMA6EA0A0J9YXQ4 647 aa25.66■■□□□ 1.7
HERC2-204ENST00000563945 CAP2P40123 477 aa25.66■■□□□ 1.7
HERC2-204ENST00000563945 HMGCS2P54868 508 aa25.66■■□□□ 1.7
HERC2-204ENST00000563945 NAA16Q6N069 864 aaPredicted RBP25.66■■□□□ 1.7
HERC2-204ENST00000563945 PI4KBQ9UBF8 816 aa25.66■■□□□ 1.7
HERC2-204ENST00000563945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.66■■□□□ 1.7
HERC2-204ENST00000563945 TRIOBPQ9H2D6 2365 aa25.65■■□□□ 1.7
HERC2-204ENST00000563945 MCAMP43121 646 aa25.65■■□□□ 1.7
HERC2-204ENST00000563945 DEFB118Q96PH6 123 aa25.65■■□□□ 1.7
HERC2-204ENST00000563945 DHX36Q9H2U1 1008 aaKnown RBP25.65■■□□□ 1.7
HERC2-204ENST00000563945 UBE2Q1Q7Z7E8 422 aa25.64■■□□□ 1.7
HERC2-204ENST00000563945 SH3RF3Q8TEJ3 882 aaPredicted RBP25.64■■□□□ 1.7
HERC2-204ENST00000563945 SNRKQ9NRH2 765 aa25.64■■□□□ 1.7
HERC2-204ENST00000563945 COL2A1P02458 1487 aaPredicted RBP25.64■■□□□ 1.69
HERC2-204ENST00000563945 BCAR3O75815 825 aa25.63■■□□□ 1.69
HERC2-204ENST00000563945 CRACR2BQ8N4Y2 399 aaPredicted RBP25.63■■□□□ 1.69
HERC2-204ENST00000563945 GPR108Q9NPR9 543 aa25.63■■□□□ 1.69
HERC2-204ENST00000563945 AATFQ9NY61 560 aaKnown RBP eCLIP25.63■■□□□ 1.69
HERC2-204ENST00000563945 TMOD4Q9NZQ9 345 aa25.63■■□□□ 1.69
HERC2-204ENST00000563945 EVI5O60447 810 aa25.62■■□□□ 1.69
HERC2-204ENST00000563945 ASCC2Q9H1I8 757 aaPredicted RBP25.62■■□□□ 1.69
HERC2-204ENST00000563945 PTPRFP10586 1907 aa25.62■■□□□ 1.69
HERC2-204ENST00000563945 IRX3P78415 501 aaPredicted RBP25.61■■□□□ 1.69
HERC2-204ENST00000563945 ZKSCAN2Q63HK3 967 aa25.61■■□□□ 1.69
HERC2-204ENST00000563945 RBM27Q9P2N5 1060 aaKnown RBP25.61■■□□□ 1.69
HERC2-204ENST00000563945 TNNQ9UQP3 1299 aa25.61■■□□□ 1.69
HERC2-204ENST00000563945 PHIPQ8WWQ0 1821 aa25.6■■□□□ 1.69
HERC2-204ENST00000563945 ASNSP08243 561 aa25.6■■□□□ 1.69
HERC2-204ENST00000563945 TNNI3KQ59H18 835 aa25.6■■□□□ 1.69
HERC2-204ENST00000563945 SH3D19Q5HYK7 790 aa25.6■■□□□ 1.69
HERC2-204ENST00000563945 FOXP4Q8IVH2 680 aaPredicted RBP25.6■■□□□ 1.69
HERC2-204ENST00000563945 TGFBRAP1Q8WUH2 860 aa25.6■■□□□ 1.69
HERC2-204ENST00000563945 FPGT-TNNI3KV9GXZ4 949 aa25.6■■□□□ 1.69
HERC2-204ENST00000563945 SURF6O75683 361 aaKnown RBP25.59■■□□□ 1.69
HERC2-204ENST00000563945 MAPKAPK5Q8IW41 473 aa25.59■■□□□ 1.69
HERC2-204ENST00000563945 TMEM57Q8N5G2 664 aa25.59■■□□□ 1.69
HERC2-204ENST00000563945 WDR18Q9BV38 432 aa25.59■■□□□ 1.69
HERC2-204ENST00000563945 ZBTB7BO15156 539 aaPredicted RBP25.58■■□□□ 1.69
HERC2-204ENST00000563945 HMGCRP04035 888 aa25.58■■□□□ 1.69
HERC2-204ENST00000563945 PPP4CP60510 307 aa25.58■■□□□ 1.69
HERC2-204ENST00000563945 DBNDD2Q9BQY9 259 aa25.58■■□□□ 1.69
HERC2-204ENST00000563945 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.58■■□□□ 1.69
HERC2-204ENST00000563945 PAK6Q9NQU5 681 aaPredicted RBP25.58■■□□□ 1.69
HERC2-204ENST00000563945 C19orf81C9J6K1 198 aa25.57■■□□□ 1.68
HERC2-204ENST00000563945 IGSF3O75054 1194 aa25.57■■□□□ 1.68
HERC2-204ENST00000563945 HLA-DOAP06340 250 aa25.57■■□□□ 1.68
HERC2-204ENST00000563945 BACE1P56817 501 aa25.57■■□□□ 1.68
HERC2-204ENST00000563945 ATP8B2P98198 1209 aa25.57■■□□□ 1.68
HERC2-204ENST00000563945 MTMR2Q13614 643 aa25.57■■□□□ 1.68
HERC2-204ENST00000563945 RRP1BQ14684 758 aaKnown RBP25.57■■□□□ 1.68
HERC2-204ENST00000563945 NECAB2Q7Z6G3 386 aa25.57■■□□□ 1.68
HERC2-204ENST00000563945 CCAR1Q8IX12 1150 aaKnown RBP25.57■■□□□ 1.68
HERC2-204ENST00000563945 HMX1Q9NP08 348 aaPredicted RBP25.57■■□□□ 1.68
HERC2-204ENST00000563945 GINM1Q9NU53 330 aa25.57■■□□□ 1.68
HERC2-204ENST00000563945 POLA2Q14181 598 aa25.56■■□□□ 1.68
HERC2-204ENST00000563945 FTSJ3Q8IY81 847 aaKnown RBP25.56■■□□□ 1.68
HERC2-204ENST00000563945 PAWRQ96IZ0 340 aaKnown RBP25.56■■□□□ 1.68
HERC2-204ENST00000563945 DOCK3Q8IZD9 2030 aa25.55■■□□□ 1.68
HERC2-204ENST00000563945 USP17L10C9JJH3 530 aa25.55■■□□□ 1.68
HERC2-204ENST00000563945 CYP2E1P05181 493 aaPredicted RBP25.55■■□□□ 1.68
HERC2-204ENST00000563945 CRISPLD2Q9H0B8 497 aa25.55■■□□□ 1.68
HERC2-204ENST00000563945 PALD1Q9ULE6 856 aa25.55■■□□□ 1.68
HERC2-204ENST00000563945 ZAP70P43403 619 aa25.54■■□□□ 1.68
HERC2-204ENST00000563945 SSH3Q8TE77 659 aa25.54■■□□□ 1.68
HERC2-204ENST00000563945 P2RX7Q99572 595 aaKnown RBP25.54■■□□□ 1.68
HERC2-204ENST00000563945 MORF4L1Q9UBU8 362 aa25.54■■□□□ 1.68
HERC2-204ENST00000563945 FLT1P17948 1338 aa25.54■■□□□ 1.68
HERC2-204ENST00000563945 RPTORQ8N122 1335 aa25.54■■□□□ 1.68
HERC2-204ENST00000563945 GDF11O95390 407 aa25.53■■□□□ 1.68
HERC2-204ENST00000563945 HOXA7P31268 230 aaPredicted RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms