RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 F6X3S4 739 aa22.68■■□□□ 1.22
E4F1-203ENST00000563643 SLURP2P0DP57 97 aa22.68■■□□□ 1.22
E4F1-203ENST00000563643 RGS3P49796 1198 aa22.68■■□□□ 1.22
E4F1-203ENST00000563643 SH3BP5LQ7L8J4 393 aa22.68■■□□□ 1.22
E4F1-203ENST00000563643 WDR66Q8TBY9 1149 aa22.68■■□□□ 1.22
E4F1-203ENST00000563643 NUDT12Q9BQG2 462 aa22.68■■□□□ 1.22
E4F1-203ENST00000563643 ASCC2Q9H1I8 757 aaPredicted RBP22.68■■□□□ 1.22
E4F1-203ENST00000563643 MORF4L1Q9UBU8 362 aa22.68■■□□□ 1.22
E4F1-203ENST00000563643 LTBP2Q14767 1821 aa22.68■■□□□ 1.22
E4F1-203ENST00000563643 ZNF521Q96K83 1311 aa22.67■■□□□ 1.22
E4F1-203ENST00000563643 PDE8BO95263 885 aa22.67■■□□□ 1.22
E4F1-203ENST00000563643 ATN1P54259 1190 aaPredicted RBP22.67■■□□□ 1.22
E4F1-203ENST00000563643 MAP3K12Q12852 859 aa22.67■■□□□ 1.22
E4F1-203ENST00000563643 PABPC4Q13310 644 aaKnown RBP eCLIP22.67■■□□□ 1.22
E4F1-203ENST00000563643 LRRC24Q50LG9 513 aa22.67■■□□□ 1.22
E4F1-203ENST00000563643 ZSCAN29Q8IWY8 852 aaPredicted RBP22.67■■□□□ 1.22
E4F1-203ENST00000563643 TRMT44Q8IYL2 757 aaKnown RBP22.67■■□□□ 1.22
E4F1-203ENST00000563643 LOC285556D6RIA3 1793 aa22.66■■□□□ 1.22
E4F1-203ENST00000563643 KIF16BQ96L93 1317 aa22.66■■□□□ 1.22
E4F1-203ENST00000563643 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
E4F1-203ENST00000563643 ENTPD3O75355 529 aa22.66■■□□□ 1.22
E4F1-203ENST00000563643 PRDX5P30044 214 aa22.66■■□□□ 1.22
E4F1-203ENST00000563643 SPP2Q13103 211 aa22.65■■□□□ 1.22
E4F1-203ENST00000563643 IDI2Q9BXS1 227 aa22.65■■□□□ 1.22
E4F1-203ENST00000563643 C9orf78Q9NZ63 289 aaPredicted RBP22.65■■□□□ 1.22
E4F1-203ENST00000563643 RFX7Q2KHR2 1363 aa22.64■■□□□ 1.22
E4F1-203ENST00000563643 HMGCS2P54868 508 aa22.64■■□□□ 1.21
E4F1-203ENST00000563643 CCL14Q16627 93 aa22.64■■□□□ 1.21
E4F1-203ENST00000563643 DDTLA6NHG4 134 aaPredicted RBP22.63■■□□□ 1.21
E4F1-203ENST00000563643 IFIT1P09914 478 aaKnown RBP22.63■■□□□ 1.21
E4F1-203ENST00000563643 RTP1P59025 263 aa22.63■■□□□ 1.21
E4F1-203ENST00000563643 PDE3AQ14432 1141 aa22.63■■□□□ 1.21
E4F1-203ENST00000563643 KAZALD1Q96I82 304 aa22.63■■□□□ 1.21
E4F1-203ENST00000563643 SUCLG2Q96I99 432 aa22.63■■□□□ 1.21
E4F1-203ENST00000563643 ZNF280CQ8ND82 737 aa22.62■■□□□ 1.21
E4F1-203ENST00000563643 USP6NLQ92738 828 aa22.62■■□□□ 1.21
E4F1-203ENST00000563643 NCOR1O75376 2440 aa22.62■■□□□ 1.21
E4F1-203ENST00000563643 PEX10O60683 326 aa22.61■■□□□ 1.21
E4F1-203ENST00000563643 LDHBP07195 334 aaKnown RBP22.61■■□□□ 1.21
E4F1-203ENST00000563643 PUM3Q15397 648 aaKnown RBP22.61■■□□□ 1.21
E4F1-203ENST00000563643 ATP11BQ9Y2G3 1177 aa22.61■■□□□ 1.21
E4F1-203ENST00000563643 FRMPD3Q5JV73 1810 aa22.6■■□□□ 1.21
E4F1-203ENST00000563643 FGFR2P21802 821 aa22.6■■□□□ 1.21
E4F1-203ENST00000563643 RGS2P41220 211 aa22.6■■□□□ 1.21
E4F1-203ENST00000563643 GRIN2CQ14957 1233 aa22.6■■□□□ 1.21
E4F1-203ENST00000563643 ADAMTS19Q8TE59 1207 aa22.6■■□□□ 1.21
E4F1-203ENST00000563643 BADQ92934 168 aa22.6■■□□□ 1.21
E4F1-203ENST00000563643 APBA2Q99767 749 aa22.6■■□□□ 1.21
E4F1-203ENST00000563643 PRDM5Q9NQX1 630 aaPredicted RBP22.6■■□□□ 1.21
E4F1-203ENST00000563643 DNM1LO00429 736 aa22.59■■□□□ 1.21
E4F1-203ENST00000563643 MAPK4P31152 587 aa22.59■■□□□ 1.21
E4F1-203ENST00000563643 IRX3P78415 501 aaPredicted RBP22.59■■□□□ 1.21
E4F1-203ENST00000563643 GPRC5AQ8NFJ5 357 aa22.59■■□□□ 1.21
E4F1-203ENST00000563643 ATXN2LQ8WWM7 1075 aaKnown RBP22.59■■□□□ 1.21
E4F1-203ENST00000563643 TXNRD2Q9NNW7 524 aa22.59■■□□□ 1.21
E4F1-203ENST00000563643 PICALMQ13492 652 aa22.58■■□□□ 1.21
E4F1-203ENST00000563643 DDX4Q9NQI0 724 aaKnown RBP22.58■■□□□ 1.21
E4F1-203ENST00000563643 MYH13Q9UKX3 1938 aa22.57■■□□□ 1.2
E4F1-203ENST00000563643 FAM196BA6NMK8 535 aa22.57■■□□□ 1.2
E4F1-203ENST00000563643 SH3D19Q5HYK7 790 aa22.57■■□□□ 1.2
E4F1-203ENST00000563643 MORN1Q5T089 497 aa22.57■■□□□ 1.2
E4F1-203ENST00000563643 LPAR1Q92633 364 aa22.57■■□□□ 1.2
E4F1-203ENST00000563643 ASB2Q96Q27 587 aa22.57■■□□□ 1.2
E4F1-203ENST00000563643 UHRF1Q96T88 793 aaPredicted RBP22.57■■□□□ 1.2
E4F1-203ENST00000563643 TBC1D2Q9BYX2 928 aa22.57■■□□□ 1.2
E4F1-203ENST00000563643 BICC1Q9H694 974 aaKnown RBP22.57■■□□□ 1.2
E4F1-203ENST00000563643 DDX20Q9UHI6 824 aaKnown RBP22.57■■□□□ 1.2
E4F1-203ENST00000563643 ALDH1L1O75891 902 aa22.56■■□□□ 1.2
E4F1-203ENST00000563643 EXOSC9Q06265 439 aaKnown RBP22.56■■□□□ 1.2
E4F1-203ENST00000563643 GPR142Q7Z601 462 aa22.56■■□□□ 1.2
E4F1-203ENST00000563643 P2RX7Q99572 595 aaKnown RBP22.56■■□□□ 1.2
E4F1-203ENST00000563643 OSBPL5Q9H0X9 879 aaPredicted RBP22.56■■□□□ 1.2
E4F1-203ENST00000563643 PORCNQ9H237 461 aa22.56■■□□□ 1.2
E4F1-203ENST00000563643 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.56■■□□□ 1.2
E4F1-203ENST00000563643 GAKO14976 1311 aa22.56■■□□□ 1.2
E4F1-203ENST00000563643 TBC1D12O60347 775 aa22.55■■□□□ 1.2
E4F1-203ENST00000563643 MSCO60682 206 aa22.55■■□□□ 1.2
E4F1-203ENST00000563643 SLC5A1P13866 664 aa22.55■■□□□ 1.2
E4F1-203ENST00000563643 HERVK_113P62684 666 aa22.55■■□□□ 1.2
E4F1-203ENST00000563643 RABL6Q3YEC7 729 aaPredicted RBP22.55■■□□□ 1.2
E4F1-203ENST00000563643 CCAR1Q8IX12 1150 aaKnown RBP22.55■■□□□ 1.2
E4F1-203ENST00000563643 KLHDC4Q8TBB5 520 aa22.55■■□□□ 1.2
E4F1-203ENST00000563643 RNPC3Q96LT9 517 aaKnown RBP22.55■■□□□ 1.2
E4F1-203ENST00000563643 THEGQ9P2T0 379 aa22.55■■□□□ 1.2
E4F1-203ENST00000563643 SYNGAP1Q96PV0 1343 aa22.55■■□□□ 1.2
E4F1-203ENST00000563643 SALL1Q9NSC2 1324 aa22.55■■□□□ 1.2
E4F1-203ENST00000563643 E9PSI1 815 aa22.54■■□□□ 1.2
E4F1-203ENST00000563643 NBPF7P0C2Y1 421 aaPredicted RBP22.54■■□□□ 1.2
E4F1-203ENST00000563643 MFSD14CQ5VZR4 134 aa22.54■■□□□ 1.2
E4F1-203ENST00000563643 PDLIM7Q9NR12 457 aa22.54■■□□□ 1.2
E4F1-203ENST00000563643 CACNA1FO60840 1977 aa22.53■■□□□ 1.2
E4F1-203ENST00000563643 USP17L5A8MUK1 530 aa22.53■■□□□ 1.2
E4F1-203ENST00000563643 VAMP4O75379 141 aa22.53■■□□□ 1.2
E4F1-203ENST00000563643 ERVK-9P63128 1117 aa22.53■■□□□ 1.2
E4F1-203ENST00000563643 ERVK-24P63145 666 aa22.53■■□□□ 1.2
E4F1-203ENST00000563643 SLC39A5Q6ZMH5 540 aa22.53■■□□□ 1.2
E4F1-203ENST00000563643 PLEKHH3Q7Z736 793 aa22.53■■□□□ 1.2
E4F1-203ENST00000563643 PPM1EQ8WY54 764 aa22.53■■□□□ 1.2
E4F1-203ENST00000563643 LPIN2Q92539 896 aa22.53■■□□□ 1.2
E4F1-203ENST00000563643 SRCIN1Q9C0H9 1055 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms