RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 ADCY3O60266 1144 aa29.42■■■□□ 2.3
PBX1-217ENST00000559578 DPF3Q92784 378 aa29.42■■■□□ 2.3
PBX1-217ENST00000559578 TBC1D2Q9BYX2 928 aa29.42■■■□□ 2.3
PBX1-217ENST00000559578 FLT3LGP49771 235 aa29.41■■■□□ 2.3
PBX1-217ENST00000559578 TEX11Q8IYF3 940 aa29.41■■■□□ 2.3
PBX1-217ENST00000559578 PROCA1Q8NCQ7 364 aaPredicted RBP29.41■■■□□ 2.3
PBX1-217ENST00000559578 SPP2Q13103 211 aa29.4■■■□□ 2.3
PBX1-217ENST00000559578 TREML2Q5T2D2 321 aa29.4■■■□□ 2.3
PBX1-217ENST00000559578 ZNF280CQ8ND82 737 aa29.4■■■□□ 2.3
PBX1-217ENST00000559578 ZKSCAN2Q63HK3 967 aa29.39■■■□□ 2.3
PBX1-217ENST00000559578 ANKRD13CQ8N6S4 541 aa29.39■■■□□ 2.3
PBX1-217ENST00000559578 PXYLP1Q8TE99 480 aa29.39■■■□□ 2.3
PBX1-217ENST00000559578 ATAD5Q96QE3 1844 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 BAG3O95817 575 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 CAP2P40123 477 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 FXR1P51114 621 aaKnown RBP eCLIP29.38■■■□□ 2.29
PBX1-217ENST00000559578 OS9Q13438 667 aaPredicted RBP29.38■■■□□ 2.29
PBX1-217ENST00000559578 IRF5Q13568 498 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 CCDC158Q5M9N0 1113 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 TTC39AQ5SRH9 613 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 U2AF1L4Q8WU68 220 aaKnown RBP29.38■■■□□ 2.29
PBX1-217ENST00000559578 COA7Q96BR5 231 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 HTATIP2Q9BUP3 242 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 UNC93B1Q9H1C4 597 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 GPR108Q9NPR9 543 aa29.38■■■□□ 2.29
PBX1-217ENST00000559578 HERC5Q9UII4 1024 aaKnown RBP29.38■■■□□ 2.29
PBX1-217ENST00000559578 PABPC4Q13310 644 aaKnown RBP eCLIP29.37■■■□□ 2.29
PBX1-217ENST00000559578 FAM110CQ1W6H9 321 aa29.37■■■□□ 2.29
PBX1-217ENST00000559578 NAA16Q6N069 864 aaPredicted RBP29.37■■■□□ 2.29
PBX1-217ENST00000559578 TMEM57Q8N5G2 664 aa29.37■■■□□ 2.29
PBX1-217ENST00000559578 SH3RF3Q8TEJ3 882 aaPredicted RBP29.37■■■□□ 2.29
PBX1-217ENST00000559578 USP17L5A8MUK1 530 aa29.36■■■□□ 2.29
PBX1-217ENST00000559578 ELNP15502 786 aa29.36■■■□□ 2.29
PBX1-217ENST00000559578 PLCG2P16885 1265 aa29.36■■■□□ 2.29
PBX1-217ENST00000559578 POLA2Q14181 598 aa29.36■■■□□ 2.29
PBX1-217ENST00000559578 TNNI3KQ59H18 835 aa29.36■■■□□ 2.29
PBX1-217ENST00000559578 DHX36Q9H2U1 1008 aaKnown RBP29.36■■■□□ 2.29
PBX1-217ENST00000559578 AS3MTQ9HBK9 375 aa29.36■■■□□ 2.29
PBX1-217ENST00000559578 SNRKQ9NRH2 765 aa29.36■■■□□ 2.29
PBX1-217ENST00000559578 PI4KBQ9UBF8 816 aa29.36■■■□□ 2.29
PBX1-217ENST00000559578 FPGT-TNNI3KV9GXZ4 949 aa29.36■■■□□ 2.29
PBX1-217ENST00000559578 LOC285556D6RIA3 1793 aa29.35■■■□□ 2.29
PBX1-217ENST00000559578 INHAP05111 366 aa29.35■■■□□ 2.29
PBX1-217ENST00000559578 HMGCS2P54868 508 aa29.35■■■□□ 2.29
PBX1-217ENST00000559578 UBE2Q1Q7Z7E8 422 aa29.35■■■□□ 2.29
PBX1-217ENST00000559578 AATFQ9NY61 560 aaKnown RBP eCLIP29.35■■■□□ 2.29
PBX1-217ENST00000559578 TAOK2Q9UL54 1235 aa29.35■■■□□ 2.29
PBX1-217ENST00000559578 DOCK3Q8IZD9 2030 aa29.34■■■□□ 2.29
PBX1-217ENST00000559578 SGPL1O95470 568 aa29.34■■■□□ 2.29
PBX1-217ENST00000559578 GCLCP48506 637 aaPredicted RBP29.34■■■□□ 2.29
PBX1-217ENST00000559578 MAST2Q6P0Q8 1798 aa29.34■■■□□ 2.29
PBX1-217ENST00000559578 FARP2O94887 1054 aaPredicted RBP29.33■■■□□ 2.29
PBX1-217ENST00000559578 CAPN2P17655 700 aa29.33■■■□□ 2.29
PBX1-217ENST00000559578 ATP8B2P98198 1209 aa29.33■■■□□ 2.29
PBX1-217ENST00000559578 SSH3Q8TE77 659 aa29.33■■■□□ 2.29
PBX1-217ENST00000559578 DBNDD2Q9BQY9 259 aa29.33■■■□□ 2.29
PBX1-217ENST00000559578 SURF6O75683 361 aaKnown RBP29.32■■■□□ 2.28
PBX1-217ENST00000559578 RRP1BQ14684 758 aaKnown RBP29.32■■■□□ 2.28
PBX1-217ENST00000559578 TRIOBPQ9H2D6 2365 aa29.32■■■□□ 2.28
PBX1-217ENST00000559578 PPP4CP60510 307 aa29.31■■■□□ 2.28
PBX1-217ENST00000559578 SH3D19Q5HYK7 790 aa29.31■■■□□ 2.28
PBX1-217ENST00000559578 CHRDL2Q6WN34 429 aa29.31■■■□□ 2.28
PBX1-217ENST00000559578 TGFBRAP1Q8WUH2 860 aa29.31■■■□□ 2.28
PBX1-217ENST00000559578 TRIM34Q9BYJ4 488 aa29.31■■■□□ 2.28
PBX1-217ENST00000559578 IGSF3O75054 1194 aa29.3■■■□□ 2.28
PBX1-217ENST00000559578 TFRCP02786 760 aaKnown RBP29.3■■■□□ 2.28
PBX1-217ENST00000559578 CYP2E1P05181 493 aaPredicted RBP29.3■■■□□ 2.28
PBX1-217ENST00000559578 ZNF512BQ96KM6 892 aaPredicted RBP29.3■■■□□ 2.28
PBX1-217ENST00000559578 ASCC2Q9H1I8 757 aaPredicted RBP29.3■■■□□ 2.28
PBX1-217ENST00000559578 NR2E3Q9Y5X4 410 aa29.3■■■□□ 2.28
PBX1-217ENST00000559578 ASNSP08243 561 aa29.29■■■□□ 2.28
PBX1-217ENST00000559578 FOXP4Q8IVH2 680 aaPredicted RBP29.29■■■□□ 2.28
PBX1-217ENST00000559578 MAPKAPK5Q8IW41 473 aa29.29■■■□□ 2.28
PBX1-217ENST00000559578 FTSJ3Q8IY81 847 aaKnown RBP29.29■■■□□ 2.28
PBX1-217ENST00000559578 DEFB118Q96PH6 123 aa29.29■■■□□ 2.28
PBX1-217ENST00000559578 WDR18Q9BV38 432 aa29.29■■■□□ 2.28
PBX1-217ENST00000559578 FLT1P17948 1338 aa29.28■■■□□ 2.28
PBX1-217ENST00000559578 CDK5RAP2Q96SN8 1893 aa29.28■■■□□ 2.28
PBX1-217ENST00000559578 ADGRA1Q86SQ6 560 aa29.28■■■□□ 2.28
PBX1-217ENST00000559578 CRACR2BQ8N4Y2 399 aaPredicted RBP29.28■■■□□ 2.28
PBX1-217ENST00000559578 C1orf115Q9H7X2 142 aa29.28■■■□□ 2.28
PBX1-217ENST00000559578 PAK6Q9NQU5 681 aaPredicted RBP29.28■■■□□ 2.28
PBX1-217ENST00000559578 TMOD4Q9NZQ9 345 aa29.28■■■□□ 2.28
PBX1-217ENST00000559578 SIPA1L1O43166 1804 aa29.28■■■□□ 2.28
PBX1-217ENST00000559578 FOCADQ5VW36 1801 aa29.27■■■□□ 2.28
PBX1-217ENST00000559578 BACE1P56817 501 aa29.27■■■□□ 2.28
PBX1-217ENST00000559578 MTMR2Q13614 643 aa29.27■■■□□ 2.28
PBX1-217ENST00000559578 MYO5AQ9Y4I1 1855 aaKnown RBP29.26■■■□□ 2.27
PBX1-217ENST00000559578 IRX3P78415 501 aaPredicted RBP29.26■■■□□ 2.27
PBX1-217ENST00000559578 GINM1Q9NU53 330 aa29.26■■■□□ 2.27
PBX1-217ENST00000559578 PALD1Q9ULE6 856 aa29.26■■■□□ 2.27
PBX1-217ENST00000559578 NOP58Q9Y2X3 529 aaKnown RBP29.26■■■□□ 2.27
PBX1-217ENST00000559578 ZAP70P43403 619 aa29.25■■■□□ 2.27
PBX1-217ENST00000559578 METTL16Q86W50 562 aaKnown RBP29.25■■■□□ 2.27
PBX1-217ENST00000559578 ITPRIPQ8IWB1 547 aa29.25■■■□□ 2.27
PBX1-217ENST00000559578 C19orf81C9J6K1 198 aa29.24■■■□□ 2.27
PBX1-217ENST00000559578 HLA-DOAP06340 250 aa29.24■■■□□ 2.27
PBX1-217ENST00000559578 DNAJC18Q9H819 358 aa29.24■■■□□ 2.27
PBX1-217ENST00000559578 PIH1D3Q9NQM4 214 aaKnown RBP29.24■■■□□ 2.27
PBX1-217ENST00000559578 RBM27Q9P2N5 1060 aaKnown RBP29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms