RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MADDQ8WXG6 1647 aa19.61■□□□□ 0.73
PTPN21-208ENST00000556564 GRAPQ13588 217 aa19.61■□□□□ 0.73
PTPN21-208ENST00000556564 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
PTPN21-208ENST00000556564 MASTLQ96GX5 879 aa19.61■□□□□ 0.73
PTPN21-208ENST00000556564 TBC1D9BQ66K14 1250 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 LZTS2Q9BRK4 669 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 GOLGA8HP0CJ92 632 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 ALAS1P13196 640 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 DYNLL1P63167 89 aaKnown RBP19.6■□□□□ 0.73
PTPN21-208ENST00000556564 PTPN14Q15678 1187 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 TAF3Q5VWG9 929 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 VSIG10Q8N0Z9 540 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 DNAJC25Q9H1X3 360 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 COL15A1P39059 1388 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 ARID4AP29374 1257 aaPredicted RBP19.6■□□□□ 0.73
PTPN21-208ENST00000556564 HS2ST1Q7LGA3 356 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 RGS22Q8NE09 1264 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 SPECC1Q5M775 1068 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 CSRNP1Q96S65 589 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 VPS54Q9P1Q0 977 aa19.6■□□□□ 0.73
PTPN21-208ENST00000556564 GBP2P32456 591 aaPredicted RBP19.59■□□□□ 0.73
PTPN21-208ENST00000556564 ARID5AQ03989 594 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 ICA1Q05084 483 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 CHURC1Q8WUH1 139 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 NCAPG2Q86XI2 1143 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 PIM2Q9P1W9 311 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 SYT1P21579 422 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 PTH1RQ03431 593 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 ABCB5Q2M3G0 1257 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 DIS3L2Q8IYB7 885 aaKnown RBP19.59■□□□□ 0.73
PTPN21-208ENST00000556564 COPRSQ9NQ92 184 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 PSDA5PKW4 1024 aaPredicted RBP19.59■□□□□ 0.73
PTPN21-208ENST00000556564 KIF22Q14807 665 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 A0A1B0GVL5 298 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 AZI2Q9H6S1 392 aa19.59■□□□□ 0.73
PTPN21-208ENST00000556564 ATP10DQ9P241 1426 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 NONOQ15233 471 aaKnown RBP eCLIP19.58■□□□□ 0.73
PTPN21-208ENST00000556564 TTC38Q5R3I4 469 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 ARHGEF16Q5VV41 709 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 ZNF354CQ86Y25 554 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 PLCD3Q8N3E9 789 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 ARHGEF40Q8TER5 1519 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 ERLIN1O75477 346 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 MKRN3Q13064 507 aaKnown RBP19.58■□□□□ 0.73
PTPN21-208ENST00000556564 CCDC65Q8IXS2 484 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 IQUBQ8NA54 791 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 GLT8D2Q9H1C3 349 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 ALS2CR12Q96Q35 445 aa19.58■□□□□ 0.73
PTPN21-208ENST00000556564 CCDC172P0C7W6 258 aa19.58■□□□□ 0.72
PTPN21-208ENST00000556564 HSPD1P10809 573 aaKnown RBP19.58■□□□□ 0.72
PTPN21-208ENST00000556564 DBNLQ9UJU6 430 aaKnown RBP19.58■□□□□ 0.72
PTPN21-208ENST00000556564 CNGA1P29973 690 aa19.58■□□□□ 0.72
PTPN21-208ENST00000556564 ZNF654Q8IZM8 581 aa19.58■□□□□ 0.72
PTPN21-208ENST00000556564 ARHGEF1Q92888 912 aaKnown RBP19.58■□□□□ 0.72
PTPN21-208ENST00000556564 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
PTPN21-208ENST00000556564 CTAGE1Q96RT6 745 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 KLHL40Q2TBA0 621 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 DCAF17Q5H9S7 520 aaPredicted RBP19.57■□□□□ 0.72
PTPN21-208ENST00000556564 URI1O94763 535 aaPredicted RBP19.57■□□□□ 0.72
PTPN21-208ENST00000556564 RILPL1Q5EBL4 403 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 LUZP1Q86V48 1076 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 RTKN2Q8IZC4 609 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 GSPT1P15170 499 aaKnown RBP19.57■□□□□ 0.72
PTPN21-208ENST00000556564 INTS4Q96HW7 963 aaKnown RBP19.57■□□□□ 0.72
PTPN21-208ENST00000556564 NCAPD2Q15021 1401 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 M0R2C6 588 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 FLOT1O75955 427 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 SMIM5Q71RC9 77 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 LRRIQ1Q96JM4 1722 aa19.57■□□□□ 0.72
PTPN21-208ENST00000556564 RNF123Q5XPI4 1314 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 CALCRLQ16602 461 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 TXNRD1Q16881 649 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 HAUS3Q68CZ6 603 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 KRT25Q7Z3Z0 450 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 ARHGEF35A5YM69 484 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 LLPHQ9BRT6 129 aaKnown RBP19.56■□□□□ 0.72
PTPN21-208ENST00000556564 KDM2BQ8NHM5 1336 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 BICDL2A1A5D9 508 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 TESPA1A2RU30 521 aaPredicted RBP19.56■□□□□ 0.72
PTPN21-208ENST00000556564 CEP135Q66GS9 1140 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.56■□□□□ 0.72
PTPN21-208ENST00000556564 SMCO2A6NFE2 343 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 GSDMDP57764 484 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 NARFQ9UHQ1 456 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 SPICE1Q8N0Z3 855 aa19.56■□□□□ 0.72
PTPN21-208ENST00000556564 SPATA31A6Q5VVP1 1343 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 SEMA3EO15041 775 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 GDF11O95390 407 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 PLCD1P51178 756 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 SLC27A3Q5K4L6 730 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 IFT74Q96LB3 600 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 USP17L3A6NCW0 530 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 USP17L4A6NCW7 530 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 CIAPIN1Q6FI81 312 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 USP17L1Q7RTZ2 530 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 JAK2O60674 1132 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 ANO1Q5XXA6 986 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 PI16Q6UXB8 463 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 PALD1Q9ULE6 856 aa19.55■□□□□ 0.72
PTPN21-208ENST00000556564 LAMC1P11047 1609 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms