RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 SSH3Q8TE77 659 aa17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 FAM163AQ96GL9 167 aaPredicted RBP17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 XAGE2Q96GT9 111 aa17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 UNC93B1Q9H1C4 597 aa17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 SLC45A1Q9Y2W3 748 aa17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 MROH7-TTC4A0A0A0MT08 1334 aa17.17■□□□□ 0.34
SPTLC2-202ENST00000554365 TNPO2O14787 897 aaKnown RBP17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 ZBTB22O15209 634 aa17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 ELNP15502 786 aa17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 MAP3K10Q02779 954 aa17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 MECOMQ03112 1051 aa17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 ERICH6Q7L0X2 663 aa17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 CCDC136Q96JN2 1154 aa17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 AKAP2Q9Y2D5 859 aa17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 PDS5AQ29RF7 1337 aaKnown RBP17.16■□□□□ 0.34
SPTLC2-202ENST00000554365 FAM196BA6NMK8 535 aa17.15■□□□□ 0.34
SPTLC2-202ENST00000554365 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
SPTLC2-202ENST00000554365 FARP2O94887 1054 aaPredicted RBP17.15■□□□□ 0.34
SPTLC2-202ENST00000554365 UBE2Q1Q7Z7E8 422 aa17.15■□□□□ 0.34
SPTLC2-202ENST00000554365 NEUROD6Q96NK8 337 aa17.15■□□□□ 0.34
SPTLC2-202ENST00000554365 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
SPTLC2-202ENST00000554365 RBM27Q9P2N5 1060 aaKnown RBP17.15■□□□□ 0.34
SPTLC2-202ENST00000554365 MGAMO43451 1857 aa17.15■□□□□ 0.34
SPTLC2-202ENST00000554365 DOCK1Q14185 1865 aa17.15■□□□□ 0.34
SPTLC2-202ENST00000554365 INHAP05111 366 aa17.14■□□□□ 0.33
SPTLC2-202ENST00000554365 GORABQ5T7V8 394 aa17.14■□□□□ 0.33
SPTLC2-202ENST00000554365 RWDD1Q9H446 243 aaPredicted RBP17.14■□□□□ 0.33
SPTLC2-202ENST00000554365 AGTPBP1Q9UPW5 1226 aa17.14■□□□□ 0.33
SPTLC2-202ENST00000554365 NR2E3Q9Y5X4 410 aa17.14■□□□□ 0.33
SPTLC2-202ENST00000554365 GPR75-ASB3A0A0A6YYF3 556 aa17.13■□□□□ 0.33
SPTLC2-202ENST00000554365 SGPL1O95470 568 aa17.13■□□□□ 0.33
SPTLC2-202ENST00000554365 TFRCP02786 760 aaKnown RBP17.13■□□□□ 0.33
SPTLC2-202ENST00000554365 RHBDL3P58872 404 aa17.13■□□□□ 0.33
SPTLC2-202ENST00000554365 TREML2Q5T2D2 321 aa17.13■□□□□ 0.33
SPTLC2-202ENST00000554365 ANKRD13CQ8N6S4 541 aa17.13■□□□□ 0.33
SPTLC2-202ENST00000554365 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
SPTLC2-202ENST00000554365 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
SPTLC2-202ENST00000554365 GSTO1P78417 241 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 IRF5Q13568 498 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 PI16Q6UXB8 463 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 TBC1D9Q6ZT07 1266 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 SPATA5Q8NB90 893 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 PXYLP1Q8TE99 480 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 COA7Q96BR5 231 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 DEFB118Q96PH6 123 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 RAI14Q9P0K7 980 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 PNMA3Q9UL41 463 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 CEP290O15078 2479 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 PHIPQ8WWQ0 1821 aa17.12■□□□□ 0.33
SPTLC2-202ENST00000554365 TBC1D12O60347 775 aa17.11■□□□□ 0.33
SPTLC2-202ENST00000554365 HMMRO75330 724 aa17.11■□□□□ 0.33
SPTLC2-202ENST00000554365 LDHCP07864 332 aa17.11■□□□□ 0.33
SPTLC2-202ENST00000554365 SPP2Q13103 211 aa17.11■□□□□ 0.33
SPTLC2-202ENST00000554365 SMC5Q8IY18 1101 aa17.11■□□□□ 0.33
SPTLC2-202ENST00000554365 OSBPL5Q9H0X9 879 aaPredicted RBP17.11■□□□□ 0.33
SPTLC2-202ENST00000554365 PTPRFP10586 1907 aa17.11■□□□□ 0.33
SPTLC2-202ENST00000554365 EVI5O60447 810 aa17.1■□□□□ 0.33
SPTLC2-202ENST00000554365 CENPQQ7L2Z9 268 aaPredicted RBP17.1■□□□□ 0.33
SPTLC2-202ENST00000554365 PROCA1Q8NCQ7 364 aaPredicted RBP17.1■□□□□ 0.33
SPTLC2-202ENST00000554365 ZNF280CQ8ND82 737 aa17.1■□□□□ 0.33
SPTLC2-202ENST00000554365 NSUN4Q96CB9 384 aaKnown RBP17.1■□□□□ 0.33
SPTLC2-202ENST00000554365 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
SPTLC2-202ENST00000554365 TRIOBPQ9H2D6 2365 aa17.1■□□□□ 0.33
SPTLC2-202ENST00000554365 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
SPTLC2-202ENST00000554365 HMGCS2P54868 508 aa17.09■□□□□ 0.33
SPTLC2-202ENST00000554365 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
SPTLC2-202ENST00000554365 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
SPTLC2-202ENST00000554365 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
SPTLC2-202ENST00000554365 MAP4K4O95819 1239 aaPredicted RBP17.08■□□□□ 0.32
SPTLC2-202ENST00000554365 CAP2P40123 477 aa17.08■□□□□ 0.32
SPTLC2-202ENST00000554365 PABPC4Q13310 644 aaKnown RBP eCLIP17.08■□□□□ 0.32
SPTLC2-202ENST00000554365 NOL10Q9BSC4 688 aaKnown RBP17.08■□□□□ 0.32
SPTLC2-202ENST00000554365 PAK6Q9NQU5 681 aaPredicted RBP17.08■□□□□ 0.32
SPTLC2-202ENST00000554365 LRP2BPQ9P2M1 347 aa17.08■□□□□ 0.32
SPTLC2-202ENST00000554365 EXOC6BQ9Y2D4 811 aa17.08■□□□□ 0.32
SPTLC2-202ENST00000554365 COL2A1P02458 1487 aaPredicted RBP17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 GCLCP48506 637 aaPredicted RBP17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 G3BP1Q13283 466 aaKnown RBP eCLIP17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 SH3RF3Q8TEJ3 882 aaPredicted RBP17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 PAWRQ96IZ0 340 aaKnown RBP17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 TBC1D2Q9BYX2 928 aa17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 PRO3102Q9H379 93 aa17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 AS3MTQ9HBK9 375 aa17.07■□□□□ 0.32
SPTLC2-202ENST00000554365 SURF6O75683 361 aaKnown RBP17.06■□□□□ 0.32
SPTLC2-202ENST00000554365 UQCRFS1P1P0C7P4 283 aa17.06■□□□□ 0.32
SPTLC2-202ENST00000554365 CAPN2P17655 700 aa17.06■□□□□ 0.32
SPTLC2-202ENST00000554365 MCAMP43121 646 aa17.06■□□□□ 0.32
SPTLC2-202ENST00000554365 ASCC2Q9H1I8 757 aaPredicted RBP17.06■□□□□ 0.32
SPTLC2-202ENST00000554365 SZT2Q5T011 3432 aa17.05■□□□□ 0.32
SPTLC2-202ENST00000554365 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
SPTLC2-202ENST00000554365 CRISPLD2Q9H0B8 497 aa17.05■□□□□ 0.32
SPTLC2-202ENST00000554365 SNRKQ9NRH2 765 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms