RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GABRQQ9UN88 632 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 LRRFIP2Q9Y608 721 aaKnown RBP8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 AK9Q5TCS8 1911 aa8.56□□□□□ -1.04
PRPF40B-214ENST00000551320 TLR2O60603 784 aa8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 IFIT1P09914 478 aaKnown RBP8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 CETPP11597 493 aa8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 PSMC4P43686 418 aa8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 LACTBP83111 547 aaPredicted RBP8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 PICALMQ13492 652 aa8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 ERO1BQ86YB8 467 aa8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 SHISA4Q96DD7 197 aa8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 MEIS3Q99687 375 aa8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 DDX4Q9NQI0 724 aaKnown RBP8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 A0A0C4DFX4 3053 aa8.55□□□□□ -1.04
PRPF40B-214ENST00000551320 DDTLA6NHG4 134 aaPredicted RBP8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 FMNL1O95466 1100 aaPredicted RBP8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 SLC5A1P13866 664 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 ELNP15502 786 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 ZEB1P37275 1124 aaPredicted RBP8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 RGS3P49796 1198 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 FXR1P51114 621 aaKnown RBP eCLIP8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 SLFN5Q08AF3 891 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 PPIL2Q13356 520 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 SNAPC2Q13487 334 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 ATP2B3Q16720 1220 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 SHROOM1Q2M3G4 852 aaPredicted RBP8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 GADL1Q6ZQY3 521 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 ZNF384Q8TF68 577 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 MARVELD3Q96A59 401 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 ZNF341Q9BYN7 854 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 TMOD2Q9NZR1 351 aa8.54□□□□□ -1.04
PRPF40B-214ENST00000551320 LDHBP07195 334 aaKnown RBP8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 PRKCZQ05513 592 aa8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 TFCP2Q12800 502 aa8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 RASGRF1Q13972 1273 aa8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 RRP1BQ14684 758 aaKnown RBP8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 INTS3Q68E01 1043 aaKnown RBP8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 C17orf99Q6UX52 265 aa8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 TBC1D22AQ8WUA7 517 aa8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 FAM151AQ8WW52 585 aa8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 LPIN2Q92539 896 aa8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 BIN2Q9UBW5 565 aaPredicted RBP8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 ABCF2Q9UG63 623 aa8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 ZHX2Q9Y6X8 837 aa8.53□□□□□ -1.04
PRPF40B-214ENST00000551320 TRIM75PA6NK02 468 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 PHF20L1A8MW92 1017 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 UBTFL1P0CB47 393 aaPredicted RBP8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 COL9A1P20849 921 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 EMP3P54852 163 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 HDLBPQ00341 1268 aaKnown RBP8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 VARS2Q5ST30 1063 aaKnown RBP8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 CCDC102BQ68D86 513 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 HHIPL2Q6UWX4 724 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 FAM83AQ86UY5 434 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 ZSCAN29Q8IWY8 852 aaPredicted RBP8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 DPF3Q92784 378 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 UNC93B1Q9H1C4 597 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 SNRKQ9NRH2 765 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 CEP126Q9P2H0 1117 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 LAMB1P07942 1786 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 MYH13Q9UKX3 1938 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 PTPRCP08575 1304 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 ADGRA2Q96PE1 1338 aa8.52□□□□□ -1.05
PRPF40B-214ENST00000551320 UNCXA6NJT0 531 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 E9PSI1 815 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 TRIM66O15016 1216 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 WDHD1O75717 1129 aaPredicted RBP8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 CCL5P13501 91 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 PTPREP23469 700 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 BTDP43251 543 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 JAG1P78504 1218 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 PPATQ06203 517 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 TRIM32Q13049 653 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 KIF22Q14807 665 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 TREML2Q5T2D2 321 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 DCAF15Q66K64 600 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 NBPF11Q86T75 865 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 WDR66Q8TBY9 1149 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 RAET1EQ8TD07 263 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 CLUAP1Q96AJ1 413 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 NEUROD6Q96NK8 337 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 RNF208Q9H0X6 261 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 SRRDQ9UH36 339 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 ZNF112Q9UJU3 913 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 LAMA3Q16787 3333 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 MYPNQ86TC9 1320 aa8.51□□□□□ -1.05
PRPF40B-214ENST00000551320 ATRNL1Q5VV63 1379 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 COL6A3P12111 3177 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 BCAR3O75815 825 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 PTPRAP18433 802 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 GRK4P32298 578 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 MECOMQ03112 1051 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 PADI6Q6TGC4 694 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 ANKRD23Q86SG2 305 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 XAGE2Q96GT9 111 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
PRPF40B-214ENST00000551320 BCL11AQ9H165 835 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms