RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 CDC42BPAQ5VT25 1732 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 MAN1A2O60476 641 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 DIAPH1O60610 1272 aaKnown RBP8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 SMNDC1O75940 238 aaKnown RBP eCLIP8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 NEUROD1Q13562 356 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 PPP2R5EQ16537 467 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 DIEXFQ68CQ4 756 aaKnown RBP8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 SPATC1Q76KD6 591 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 EMILIN2Q9BXX0 1053 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 IRF2BPLQ9H1B7 796 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 DNAJB12Q9NXW2 375 aaKnown RBP8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 UHRF1BP1Q6BDS2 1440 aa8.48□□□□□ -1.05
TGFBR1-208ENST00000550253 DISP3Q9P2K9 1392 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 A0A1W2PQH9 124 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 DDAH1O94760 285 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 PCSK7Q16549 785 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 PDZD3Q86UT5 571 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 ST13P5Q8NFI4 369 aaPredicted RBP8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 ADAM19Q9H013 955 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 RBSNQ9H1K0 784 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 CBX8Q9HC52 389 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 TROQ12816 1431 aaPredicted RBP8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 TRAPPC8Q9Y2L5 1435 aa8.47□□□□□ -1.05
TGFBR1-208ENST00000550253 FAM187AA6NFU0 413 aa8.46□□□□□ -1.05
TGFBR1-208ENST00000550253 B2RBV5 119 aa8.46□□□□□ -1.05
TGFBR1-208ENST00000550253 GRIN3BO60391 1043 aa8.46□□□□□ -1.05
TGFBR1-208ENST00000550253 EFCAB2Q5VUJ9 269 aa8.46□□□□□ -1.05
TGFBR1-208ENST00000550253 ANTXR1Q9H6X2 564 aa8.46□□□□□ -1.05
TGFBR1-208ENST00000550253 CACNA2D2Q9NY47 1150 aa8.46□□□□□ -1.05
TGFBR1-208ENST00000550253 ZMYM5Q9UJ78 669 aa8.46□□□□□ -1.05
TGFBR1-208ENST00000550253 PDZRN3Q9UPQ7 1066 aa8.46□□□□□ -1.05
TGFBR1-208ENST00000550253 PTCH2Q9Y6C5 1203 aa8.46□□□□□ -1.05
TGFBR1-208ENST00000550253 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.06
TGFBR1-208ENST00000550253 MLH3Q9UHC1 1453 aa8.46□□□□□ -1.06
TGFBR1-208ENST00000550253 FMN1Q68DA7 1419 aa8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 VIL1P09327 827 aaKnown RBP8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 ESRRAP11474 423 aaPredicted RBP8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 EIF2AK2P19525 551 aaKnown RBP8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 MRM1Q6IN84 353 aaKnown RBP8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 C6orf15Q6UXA7 325 aaPredicted RBP8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 TTC6Q86TZ1 520 aa8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 FAM178BQ8IXR5 827 aa8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 ZNF669Q96BR6 464 aaPredicted RBP8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 IGFLR1Q9H665 355 aa8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 PFDN2Q9UHV9 154 aa8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 AGLP35573 1532 aa8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 PRR36Q9H6K5 1346 aa8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 PTPRTO14522 1441 aa8.45□□□□□ -1.06
TGFBR1-208ENST00000550253 SOBPA7XYQ1 873 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 MEIS3P2A8K0S8 358 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 SELPP16109 830 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 FGFR3P22607 806 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 TCEA2Q15560 299 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 DALRD3Q5D0E6 543 aaKnown RBP8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 TAF7LQ5H9L4 462 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 ZNF837Q96EG3 531 aaPredicted RBP8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 GMCL1Q96IK5 515 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 TM9SF2Q99805 663 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 NCOA1Q15788 1441 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 CAMSAP1Q5T5Y3 1602 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 UPK3BL1B0FP48 263 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 UPK3BL2E5RIL1 263 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 GUCY2CP25092 1073 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 CTBSQ01459 385 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 SSRP1Q08945 709 aaKnown RBP8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 CCDC181Q5TID7 509 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 SYNPOQ8N3V7 929 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 CCDC155Q8N6L0 562 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 POLR3GLQ9BT43 218 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 UBE2OQ9C0C9 1292 aaKnown RBP8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 PPME1Q9Y570 386 aa8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 SUPT6HQ7KZ85 1726 aaKnown RBP8.44□□□□□ -1.06
TGFBR1-208ENST00000550253 SAMD9LQ8IVG5 1584 aa8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 MROH2AA6NES4 1674 aa8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 ASMTLO95671 621 aa8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 HCLS1P14317 486 aaPredicted RBP8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 PTPRAP18433 802 aa8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 CDK8P49336 464 aa8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 MMRN1Q13201 1228 aa8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 LRRFIP1Q32MZ4 808 aaKnown RBP8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 SYT9Q86SS6 491 aa8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 TYW1Q9NV66 732 aaKnown RBP8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 CLTCQ00610 1675 aaKnown RBP8.43□□□□□ -1.06
TGFBR1-208ENST00000550253 ZNF142P52746 1687 aaPredicted RBP8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 GFRA2O00451 464 aa8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 PDGFRBP09619 1106 aa8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 MAP1SQ66K74 1059 aaPredicted RBP8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 KRT26Q7Z3Y9 468 aa8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 TAB3Q8N5C8 712 aaPredicted RBP8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 ZSCAN1Q8NBB4 408 aa8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 GTPBP3Q969Y2 492 aaKnown RBP8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 CHPF2Q9P2E5 772 aa8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 CD2APQ9Y5K6 639 aa8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 MYO3AQ8NEV4 1616 aa8.42□□□□□ -1.06
TGFBR1-208ENST00000550253 SIN3BO75182 1162 aa8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 GSTP1P09211 210 aaKnown RBP8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 CPB1P15086 417 aa8.41□□□□□ -1.06
TGFBR1-208ENST00000550253 PERM1Q5SV97 790 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms