RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 WNK4Q96J92 1243 aa23.03■■□□□ 1.28
DDX55-211ENST00000544429 DNAJC18Q9H819 358 aa23.03■■□□□ 1.28
DDX55-211ENST00000544429 ATP8A2Q9NTI2 1148 aa23.03■■□□□ 1.28
DDX55-211ENST00000544429 M0R2C6 588 aa23.02■■□□□ 1.28
DDX55-211ENST00000544429 FOXP4Q8IVH2 680 aaPredicted RBP23.02■■□□□ 1.28
DDX55-211ENST00000544429 EHD4Q9H223 541 aa23.02■■□□□ 1.28
DDX55-211ENST00000544429 WBP1LQ9NX94 342 aa23.02■■□□□ 1.28
DDX55-211ENST00000544429 SAP30BPQ9UHR5 308 aaKnown RBP23.02■■□□□ 1.28
DDX55-211ENST00000544429 CSADQ9Y600 493 aa23.02■■□□□ 1.28
DDX55-211ENST00000544429 SPDYE5A6NIY4 337 aa23.01■■□□□ 1.27
DDX55-211ENST00000544429 GSPT1P15170 499 aaKnown RBP23.01■■□□□ 1.27
DDX55-211ENST00000544429 KIF23Q02241 960 aaPredicted RBP23.01■■□□□ 1.27
DDX55-211ENST00000544429 SEC62Q99442 399 aaKnown RBP23.01■■□□□ 1.27
DDX55-211ENST00000544429 ELP3Q9H9T3 547 aa23.01■■□□□ 1.27
DDX55-211ENST00000544429 FAM196BA6NMK8 535 aa23■■□□□ 1.27
DDX55-211ENST00000544429 GPAA1O43292 621 aa23■■□□□ 1.27
DDX55-211ENST00000544429 MAP2K1Q02750 393 aaPredicted RBP23■■□□□ 1.27
DDX55-211ENST00000544429 TTC22Q5TAA0 569 aa23■■□□□ 1.27
DDX55-211ENST00000544429 REM2Q8IYK8 340 aaPredicted RBP23■■□□□ 1.27
DDX55-211ENST00000544429 CNKSR2Q8WXI2 1034 aa23■■□□□ 1.27
DDX55-211ENST00000544429 OPTNQ96CV9 577 aa23■■□□□ 1.27
DDX55-211ENST00000544429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23■■□□□ 1.27
DDX55-211ENST00000544429 GSG1L2A8MUP6 293 aa22.99■■□□□ 1.27
DDX55-211ENST00000544429 CTNND1O60716 968 aaKnown RBP22.99■■□□□ 1.27
DDX55-211ENST00000544429 PLCD1P51178 756 aa22.99■■□□□ 1.27
DDX55-211ENST00000544429 GABPAQ06546 454 aa22.99■■□□□ 1.27
DDX55-211ENST00000544429 RRP1BQ14684 758 aaKnown RBP22.99■■□□□ 1.27
DDX55-211ENST00000544429 ERO1BQ86YB8 467 aa22.99■■□□□ 1.27
DDX55-211ENST00000544429 CCDC136Q96JN2 1154 aa22.99■■□□□ 1.27
DDX55-211ENST00000544429 SLC4A4Q9Y6R1 1079 aa22.99■■□□□ 1.27
DDX55-211ENST00000544429 TRIM6-TRIM34B2RNG4 842 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 HLA-DOAP06340 250 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 TM4SF4P48230 202 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 GIMAP6Q6P9H5 292 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 TTC6Q86TZ1 520 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 SCYL3Q8IZE3 742 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 MS4A4AQ96JQ5 239 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 MCM9Q9NXL9 1143 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 SERPINB13Q9UIV8 391 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 TAOK2Q9UL54 1235 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 PTPRFP10586 1907 aa22.98■■□□□ 1.27
DDX55-211ENST00000544429 TESPA1A2RU30 521 aaPredicted RBP22.97■■□□□ 1.27
DDX55-211ENST00000544429 FOXP2O15409 715 aa22.97■■□□□ 1.27
DDX55-211ENST00000544429 GNAT2P19087 354 aa22.97■■□□□ 1.27
DDX55-211ENST00000544429 EVX2Q03828 476 aa22.97■■□□□ 1.27
DDX55-211ENST00000544429 TATDN1Q6P1N9 297 aa22.97■■□□□ 1.27
DDX55-211ENST00000544429 RILPL2Q969X0 211 aa22.97■■□□□ 1.27
DDX55-211ENST00000544429 HELLSQ9NRZ9 838 aa22.97■■□□□ 1.27
DDX55-211ENST00000544429 A0A0D9SFI3 127 aa22.96■■□□□ 1.27
DDX55-211ENST00000544429 SDSP20132 328 aa22.96■■□□□ 1.27
DDX55-211ENST00000544429 PPATQ06203 517 aa22.96■■□□□ 1.27
DDX55-211ENST00000544429 PPIL2Q13356 520 aa22.96■■□□□ 1.27
DDX55-211ENST00000544429 C12orf60Q5U649 245 aa22.96■■□□□ 1.27
DDX55-211ENST00000544429 FAM227BQ96M60 508 aa22.96■■□□□ 1.27
DDX55-211ENST00000544429 EPB41L4AQ9HCS5 686 aaPredicted RBP22.96■■□□□ 1.27
DDX55-211ENST00000544429 HSPA1AP0DMV8 641 aaKnown RBP22.95■■□□□ 1.26
DDX55-211ENST00000544429 HSPA1BP0DMV9 641 aaKnown RBP22.95■■□□□ 1.26
DDX55-211ENST00000544429 MYH8P13535 1937 aa22.95■■□□□ 1.26
DDX55-211ENST00000544429 PTPRAP18433 802 aa22.95■■□□□ 1.26
DDX55-211ENST00000544429 CAP2P40123 477 aa22.95■■□□□ 1.26
DDX55-211ENST00000544429 SLC4A8Q2Y0W8 1093 aa22.95■■□□□ 1.26
DDX55-211ENST00000544429 SBK1Q52WX2 424 aa22.95■■□□□ 1.26
DDX55-211ENST00000544429 CTR9Q6PD62 1173 aa22.95■■□□□ 1.26
DDX55-211ENST00000544429 OTUD5Q96G74 571 aa22.95■■□□□ 1.26
DDX55-211ENST00000544429 MANSC4A6NHS7 340 aaPredicted RBP22.94■■□□□ 1.26
DDX55-211ENST00000544429 PATL2C9JE40 543 aaKnown RBP22.94■■□□□ 1.26
DDX55-211ENST00000544429 USP17L12C9JPN9 530 aa22.94■■□□□ 1.26
DDX55-211ENST00000544429 USP17L21D6R901 530 aa22.94■■□□□ 1.26
DDX55-211ENST00000544429 IRF6O14896 467 aa22.94■■□□□ 1.26
DDX55-211ENST00000544429 POLR3DP05423 398 aaPredicted RBP22.94■■□□□ 1.26
DDX55-211ENST00000544429 CYP2D6P10635 497 aa22.94■■□□□ 1.26
DDX55-211ENST00000544429 INHBEP58166 350 aa22.94■■□□□ 1.26
DDX55-211ENST00000544429 JAG1P78504 1218 aa22.94■■□□□ 1.26
DDX55-211ENST00000544429 MKRN3Q13064 507 aaKnown RBP22.94■■□□□ 1.26
DDX55-211ENST00000544429 NMIQ13287 307 aaPredicted RBP22.94■■□□□ 1.26
DDX55-211ENST00000544429 CRACR2BQ8N4Y2 399 aaPredicted RBP22.94■■□□□ 1.26
DDX55-211ENST00000544429 KCNH4Q9UQ05 1017 aa22.94■■□□□ 1.26
DDX55-211ENST00000544429 SMIM22K7EJ46 135 aa22.93■■□□□ 1.26
DDX55-211ENST00000544429 SHMT1P34896 483 aa22.93■■□□□ 1.26
DDX55-211ENST00000544429 MCMDC2Q4G0Z9 681 aa22.93■■□□□ 1.26
DDX55-211ENST00000544429 GINM1Q9NU53 330 aa22.93■■□□□ 1.26
DDX55-211ENST00000544429 PPP4R2Q9NY27 417 aa22.93■■□□□ 1.26
DDX55-211ENST00000544429 ARPP21Q9UBL0 812 aaPredicted RBP22.93■■□□□ 1.26
DDX55-211ENST00000544429 ROBO3Q96MS0 1386 aa22.92■■□□□ 1.26
DDX55-211ENST00000544429 SREBF2Q12772 1141 aa22.92■■□□□ 1.26
DDX55-211ENST00000544429 CCDC129Q6ZRS4 1044 aa22.92■■□□□ 1.26
DDX55-211ENST00000544429 CYP2D7A0A087X1C5 515 aa22.91■■□□□ 1.26
DDX55-211ENST00000544429 HIP1O00291 1037 aa22.91■■□□□ 1.26
DDX55-211ENST00000544429 CA12O43570 354 aa22.91■■□□□ 1.26
DDX55-211ENST00000544429 ZNF589Q86UQ0 364 aaPredicted RBP22.91■■□□□ 1.26
DDX55-211ENST00000544429 SKAP1Q86WV1 359 aa22.91■■□□□ 1.26
DDX55-211ENST00000544429 IFNL3Q8IZI9 196 aa22.91■■□□□ 1.26
DDX55-211ENST00000544429 DDRGK1Q96HY6 314 aa22.91■■□□□ 1.26
DDX55-211ENST00000544429 PICK1Q9NRD5 415 aa22.91■■□□□ 1.26
DDX55-211ENST00000544429 SAGE1Q9NXZ1 904 aa22.91■■□□□ 1.26
DDX55-211ENST00000544429 AFG3L2Q9Y4W6 797 aa22.91■■□□□ 1.26
DDX55-211ENST00000544429 FOXN1O15353 648 aa22.9■■□□□ 1.26
DDX55-211ENST00000544429 GTF2A2P52657 109 aa22.9■■□□□ 1.26
DDX55-211ENST00000544429 MOGSQ13724 837 aa22.9■■□□□ 1.26
DDX55-211ENST00000544429 SHROOM1Q2M3G4 852 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms