RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 NUTM2BA6NNL0 878 aaPredicted RBP20.46■□□□□ 0.87
SCARB1-208ENST00000544327 NUTM2EB1AL46 878 aaPredicted RBP20.46■□□□□ 0.87
SCARB1-208ENST00000544327 TMED8Q6PL24 325 aaPredicted RBP20.46■□□□□ 0.87
SCARB1-208ENST00000544327 NUTM2AQ8IVF1 878 aaPredicted RBP20.46■□□□□ 0.87
SCARB1-208ENST00000544327 LRRC8AQ8IWT6 810 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 FANCBQ8NB91 859 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 FAM84BQ96KN1 310 aaPredicted RBP20.46■□□□□ 0.87
SCARB1-208ENST00000544327 NYXQ9GZU5 481 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 PDCL3Q9H2J4 239 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 BCL2L12Q9HB09 334 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 MORC2Q9Y6X9 1032 aaPredicted RBP20.46■□□□□ 0.87
SCARB1-208ENST00000544327 MAST2Q6P0Q8 1798 aa20.45■□□□□ 0.87
SCARB1-208ENST00000544327 SMTNL1A8MU46 457 aa20.45■□□□□ 0.86
SCARB1-208ENST00000544327 GUCY1A2P33402 732 aa20.45■□□□□ 0.86
SCARB1-208ENST00000544327 UBAC1Q9BSL1 405 aa20.45■□□□□ 0.86
SCARB1-208ENST00000544327 TOMM22Q9NS69 142 aa20.45■□□□□ 0.86
SCARB1-208ENST00000544327 ABCF2Q9UG63 623 aa20.45■□□□□ 0.86
SCARB1-208ENST00000544327 UBE2Q2LH0YL09 131 aa20.44■□□□□ 0.86
SCARB1-208ENST00000544327 IKBKBO14920 756 aa20.44■□□□□ 0.86
SCARB1-208ENST00000544327 MTERF4Q7Z6M4 381 aaKnown RBP20.44■□□□□ 0.86
SCARB1-208ENST00000544327 ZKSCAN3Q9BRR0 538 aa20.44■□□□□ 0.86
SCARB1-208ENST00000544327 IMPACTQ9P2X3 320 aa20.44■□□□□ 0.86
SCARB1-208ENST00000544327 NARFQ9UHQ1 456 aa20.44■□□□□ 0.86
SCARB1-208ENST00000544327 VPS72Q15906 364 aa20.43■□□□□ 0.86
SCARB1-208ENST00000544327 RILPL1Q5EBL4 403 aa20.43■□□□□ 0.86
SCARB1-208ENST00000544327 TBC1D9BQ66K14 1250 aa20.43■□□□□ 0.86
SCARB1-208ENST00000544327 DIS3L2Q8IYB7 885 aaKnown RBP20.43■□□□□ 0.86
SCARB1-208ENST00000544327 KRI1Q8N9T8 703 aaKnown RBP20.43■□□□□ 0.86
SCARB1-208ENST00000544327 SDR42E1Q8WUS8 393 aa20.43■□□□□ 0.86
SCARB1-208ENST00000544327 RNF26Q9BY78 433 aaPredicted RBP20.43■□□□□ 0.86
SCARB1-208ENST00000544327 OSBPL5Q9H0X9 879 aaPredicted RBP20.43■□□□□ 0.86
SCARB1-208ENST00000544327 IQSEC3Q9UPP2 1182 aaPredicted RBP20.43■□□□□ 0.86
SCARB1-208ENST00000544327 TNKSO95271 1327 aa20.43■□□□□ 0.86
SCARB1-208ENST00000544327 MYH13Q9UKX3 1938 aa20.43■□□□□ 0.86
SCARB1-208ENST00000544327 TOB1P50616 345 aaPredicted RBP20.43■□□□□ 0.86
SCARB1-208ENST00000544327 GSDMDP57764 484 aa20.43■□□□□ 0.86
SCARB1-208ENST00000544327 TPM4P67936 248 aa20.43■□□□□ 0.86
SCARB1-208ENST00000544327 CHAF1AQ13111 956 aaPredicted RBP20.43■□□□□ 0.86
SCARB1-208ENST00000544327 NCAPHQ15003 741 aa20.43■□□□□ 0.86
SCARB1-208ENST00000544327 CELF1Q92879 486 aaKnown RBP20.43■□□□□ 0.86
SCARB1-208ENST00000544327 LAMB1P07942 1786 aa20.42■□□□□ 0.86
SCARB1-208ENST00000544327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.42■□□□□ 0.86
SCARB1-208ENST00000544327 MINDY4BA8MYZ0 360 aa20.42■□□□□ 0.86
SCARB1-208ENST00000544327 BTBD18B2RXH4 712 aa20.42■□□□□ 0.86
SCARB1-208ENST00000544327 RPS6KA4O75676 772 aa20.42■□□□□ 0.86
SCARB1-208ENST00000544327 KCND1Q9NSA2 647 aa20.42■□□□□ 0.86
SCARB1-208ENST00000544327 KIAA1551Q9HCM1 1747 aa20.42■□□□□ 0.86
SCARB1-208ENST00000544327 DHX8Q14562 1220 aaKnown RBP20.41■□□□□ 0.86
SCARB1-208ENST00000544327 STK11IPQ8N1F8 1099 aa20.41■□□□□ 0.86
SCARB1-208ENST00000544327 ZNF579Q8NAF0 562 aaKnown RBP20.41■□□□□ 0.86
SCARB1-208ENST00000544327 ZNF384Q8TF68 577 aa20.41■□□□□ 0.86
SCARB1-208ENST00000544327 ANKRD2Q9GZV1 360 aa20.41■□□□□ 0.86
SCARB1-208ENST00000544327 MYH6P13533 1939 aa20.41■□□□□ 0.86
SCARB1-208ENST00000544327 NHSQ6T4R5 1651 aa20.41■□□□□ 0.86
SCARB1-208ENST00000544327 PTPREP23469 700 aa20.41■□□□□ 0.86
SCARB1-208ENST00000544327 RPS8P62241 208 aaKnown RBP20.41■□□□□ 0.86
SCARB1-208ENST00000544327 FAM98CQ17RN3 349 aaKnown RBP20.41■□□□□ 0.86
SCARB1-208ENST00000544327 KRBA2Q6ZNG9 492 aa20.41■□□□□ 0.86
SCARB1-208ENST00000544327 ZSCAN10Q96SZ4 725 aaPredicted RBP20.41■□□□□ 0.86
SCARB1-208ENST00000544327 NOL10Q9BSC4 688 aaKnown RBP20.41■□□□□ 0.86
SCARB1-208ENST00000544327 KCNH3Q9ULD8 1083 aa20.41■□□□□ 0.86
SCARB1-208ENST00000544327 BTAF1O14981 1849 aa20.4■□□□□ 0.86
SCARB1-208ENST00000544327 WTIPA6NIX2 430 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-208ENST00000544327 MYO1BO43795 1136 aa20.4■□□□□ 0.86
SCARB1-208ENST00000544327 IGSF3O75054 1194 aa20.4■□□□□ 0.86
SCARB1-208ENST00000544327 ENAHQ8N8S7 591 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-208ENST00000544327 NSUN4Q96CB9 384 aaKnown RBP20.4■□□□□ 0.86
SCARB1-208ENST00000544327 CLIC6Q96NY7 704 aa20.4■□□□□ 0.86
SCARB1-208ENST00000544327 RBM28Q9NW13 759 aaKnown RBP20.4■□□□□ 0.86
SCARB1-208ENST00000544327 FBXO2Q9UK22 296 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-208ENST00000544327 KCNJ14Q9UNX9 436 aa20.4■□□□□ 0.86
SCARB1-208ENST00000544327 BAZ2AQ9UIF9 1905 aaKnown RBP20.4■□□□□ 0.86
SCARB1-208ENST00000544327 CALM1P0DP23 149 aa20.39■□□□□ 0.86
SCARB1-208ENST00000544327 CALM2P0DP24 149 aa20.39■□□□□ 0.86
SCARB1-208ENST00000544327 CALM3P0DP25 149 aa20.39■□□□□ 0.86
SCARB1-208ENST00000544327 GTF2E1P29083 439 aaPredicted RBP20.39■□□□□ 0.86
SCARB1-208ENST00000544327 DYNLL1P63167 89 aaKnown RBP20.39■□□□□ 0.86
SCARB1-208ENST00000544327 CCZ1BP86790 482 aa20.39■□□□□ 0.86
SCARB1-208ENST00000544327 CCZ1P86791 482 aaPredicted RBP20.39■□□□□ 0.86
SCARB1-208ENST00000544327 FUT2Q10981 343 aa20.39■□□□□ 0.86
SCARB1-208ENST00000544327 NLRP3Q96P20 1036 aa20.39■□□□□ 0.86
SCARB1-208ENST00000544327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.39■□□□□ 0.86
SCARB1-208ENST00000544327 MYH2Q9UKX2 1941 aa20.39■□□□□ 0.86
SCARB1-208ENST00000544327 BIN1O00499 593 aa20.39■□□□□ 0.85
SCARB1-208ENST00000544327 PRPF3O43395 683 aaKnown RBP20.39■□□□□ 0.85
SCARB1-208ENST00000544327 ORC4O43929 436 aa20.39■□□□□ 0.85
SCARB1-208ENST00000544327 METTL16Q86W50 562 aaKnown RBP20.39■□□□□ 0.85
SCARB1-208ENST00000544327 NUP133Q8WUM0 1156 aa20.39■□□□□ 0.85
SCARB1-208ENST00000544327 FBXW7Q969H0 707 aa20.39■□□□□ 0.85
SCARB1-208ENST00000544327 CEP131Q9UPN4 1083 aa20.39■□□□□ 0.85
SCARB1-208ENST00000544327 DDAH1O94760 285 aa20.38■□□□□ 0.85
SCARB1-208ENST00000544327 RBM10P98175 930 aaKnown RBP20.38■□□□□ 0.85
SCARB1-208ENST00000544327 CTR9Q6PD62 1173 aa20.38■□□□□ 0.85
SCARB1-208ENST00000544327 SETDB2Q96T68 719 aa20.38■□□□□ 0.85
SCARB1-208ENST00000544327 FAM13BQ9NYF5 915 aa20.38■□□□□ 0.85
SCARB1-208ENST00000544327 HOOK1Q9UJC3 728 aaKnown RBP20.38■□□□□ 0.85
SCARB1-208ENST00000544327 THSD7AQ9UPZ6 1657 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 XBP1P17861 261 aa20.37■□□□□ 0.85
SCARB1-208ENST00000544327 MDM2Q00987 491 aaPredicted RBP20.37■□□□□ 0.85
SCARB1-208ENST00000544327 LONRF3Q496Y0 759 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms