RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CACTINQ8WUQ7 758 aaKnown RBP7.56□□□□□ -1.2
PTPRO-208ENST00000542557 SLC26A6Q9BXS9 759 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 FOXP1Q9H334 677 aaPredicted RBP7.56□□□□□ -1.2
PTPRO-208ENST00000542557 MTMR7Q9Y216 660 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 IKBKBO14920 756 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 LAMB1P07942 1786 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 CYP7A1P22680 504 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 GSDMDP57764 484 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 TPM4P67936 248 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 SAFBQ15424 915 aaKnown RBP eCLIP7.56□□□□□ -1.2
PTPRO-208ENST00000542557 SLC10A5Q5PT55 438 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 TMED8Q6PL24 325 aaPredicted RBP7.56□□□□□ -1.2
PTPRO-208ENST00000542557 SHC4Q6S5L8 630 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 NBPF11Q86T75 865 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 NOSTRINQ8IVI9 506 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 LRRC8AQ8IWT6 810 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 RIOK1Q9BRS2 568 aaKnown RBP7.56□□□□□ -1.2
PTPRO-208ENST00000542557 MYL10Q9BUA6 226 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 TRAIPQ9BWF2 469 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 BRIP1Q9BX63 1249 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 INCENPQ9NQS7 918 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 IMPACTQ9P2X3 320 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 KIAA1551Q9HCM1 1747 aa7.56□□□□□ -1.2
PTPRO-208ENST00000542557 A0A0G2JS52 829 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 MAGEB6P1A0A0J9YX57 407 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 SMTNL1A8MU46 457 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 MIGA1Q8NAN2 632 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 ESR2Q92731 530 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 OSBPL5Q9H0X9 879 aaPredicted RBP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 KCND1Q9NSA2 647 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 MYH13Q9UKX3 1938 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 MARCKSP29966 332 aaPredicted RBP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 SEC23AQ15436 765 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 ERFEQ4G0M1 354 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 CAVIN4Q5BKX8 364 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 RILPL1Q5EBL4 403 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 ADGRA1Q86SQ6 560 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 ZNF654Q8IZM8 581 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 CRACR2BQ8N4Y2 399 aaPredicted RBP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 LINC00116Q8NCU8 138 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 NOL10Q9BSC4 688 aaKnown RBP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 UBAC1Q9BSL1 405 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 MYO1BO43795 1136 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 FGRP09769 529 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 RRP12Q5JTH9 1297 aaKnown RBP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 DIS3L2Q8IYB7 885 aaKnown RBP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 KRI1Q8N9T8 703 aaKnown RBP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 FANCBQ8NB91 859 aa7.55□□□□□ -1.2
PTPRO-208ENST00000542557 ERCC4Q92889 916 aaPredicted RBP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 RNF26Q9BY78 433 aaPredicted RBP7.55□□□□□ -1.2
PTPRO-208ENST00000542557 NHSQ6T4R5 1651 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 TNKSO95271 1327 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 MYH6P13533 1939 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 A0A087WWV3 80 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 ECM2O94769 699 aaPredicted RBP7.54□□□□□ -1.2
PTPRO-208ENST00000542557 GYG1P46976 350 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 NCAPHQ15003 741 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 RC3H1Q5TC82 1133 aaKnown RBP7.54□□□□□ -1.2
PTPRO-208ENST00000542557 PKNOX2Q96KN3 472 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 NYXQ9GZU5 481 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 TOMM22Q9NS69 142 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 RAI14Q9P0K7 980 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 MINPP1Q9UNW1 487 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 KCNQ2O43526 872 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 PTPREP23469 700 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 GUCY1A2P33402 732 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 CCZ1BP86790 482 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 CCZ1P86791 482 aaPredicted RBP7.54□□□□□ -1.2
PTPRO-208ENST00000542557 C3orf67Q6ZVT6 689 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 FBXO33Q7Z6M2 555 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 ZNF579Q8NAF0 562 aaKnown RBP7.54□□□□□ -1.2
PTPRO-208ENST00000542557 CCDC150Q8NCX0 1101 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 FAM13BQ9NYF5 915 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 ABCF2Q9UG63 623 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 CEP131Q9UPN4 1083 aa7.54□□□□□ -1.2
PTPRO-208ENST00000542557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 DCAF8L1A6NGE4 600 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 BTBD18B2RXH4 712 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 KCNJ6P48051 423 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 NT5C2P49902 561 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 TOB1P50616 345 aaPredicted RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 KRBA2Q6ZNG9 492 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 STK11IPQ8N1F8 1099 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 SDR42E1Q8WUS8 393 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 FAM84BQ96KN1 310 aaPredicted RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 ZKSCAN3Q9BRR0 538 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 RBM28Q9NW13 759 aaKnown RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 HOOK1Q9UJC3 728 aaKnown RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 FBXO2Q9UK22 296 aaPredicted RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 KCNH3Q9ULD8 1083 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 TAF1P21675 1872 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 BTAF1O14981 1849 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 UBE2Q2LH0YL09 131 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 RIOK3O14730 519 aaKnown RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 CTIFO43310 598 aaKnown RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 CALM1P0DP23 149 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 CALM2P0DP24 149 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 CALM3P0DP25 149 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 RBM10P98175 930 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms