RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 KMT5BQ4FZB7 885 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 ANO1Q5XXA6 986 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 ALG1Q9BT22 464 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 NACAP1Q9BZK3 213 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 LY9Q9HBG7 655 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 GOLGA8AA7E2F4 631 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 WDHD1O75717 1129 aaPredicted RBP14.43□□□□□ -0.1
RNF4-222ENST00000541204 NLRP12P59046 1061 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 CAVIN4Q5BKX8 364 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 AXDND1Q5T1B0 1012 aaPredicted RBP14.43□□□□□ -0.1
RNF4-222ENST00000541204 AKNAD1Q5T1N1 836 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 KCND1Q9NSA2 647 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 MROH7-TTC4A0A0A0MT08 1334 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 DDX60Q8IY21 1712 aaKnown RBP14.43□□□□□ -0.1
RNF4-222ENST00000541204 CYP2D7A0A087X1C5 515 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 DYNLL1P63167 89 aaKnown RBP14.43□□□□□ -0.1
RNF4-222ENST00000541204 NCAPHQ15003 741 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 ELF2Q15723 593 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 BSDC1Q9NW68 430 aaPredicted RBP14.43□□□□□ -0.1
RNF4-222ENST00000541204 SLC12A7Q9Y666 1083 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 ZMYM6O95789 1325 aa14.43□□□□□ -0.1
RNF4-222ENST00000541204 LMOD1P29536 600 aaPredicted RBP14.42□□□□□ -0.1
RNF4-222ENST00000541204 GNL2Q13823 731 aaKnown RBP14.42□□□□□ -0.1
RNF4-222ENST00000541204 ERO1AQ96HE7 468 aa14.42□□□□□ -0.1
RNF4-222ENST00000541204 PPP1R13BQ96KQ4 1090 aa14.42□□□□□ -0.1
RNF4-222ENST00000541204 GNL3LQ9NVN8 582 aaKnown RBP14.42□□□□□ -0.1
RNF4-222ENST00000541204 SFPQP23246 707 aaKnown RBP eCLIP14.42□□□□□ -0.1
RNF4-222ENST00000541204 CMA1P23946 247 aa14.42□□□□□ -0.1
RNF4-222ENST00000541204 SF3B3Q15393 1217 aaKnown RBP14.42□□□□□ -0.1
RNF4-222ENST00000541204 CCDC150Q8NCX0 1101 aa14.42□□□□□ -0.1
RNF4-222ENST00000541204 ZNF397Q8NF99 534 aaPredicted RBP14.42□□□□□ -0.1
RNF4-222ENST00000541204 NLRP3Q96P20 1036 aa14.42□□□□□ -0.1
RNF4-222ENST00000541204 SLC26A6Q9BXS9 759 aa14.42□□□□□ -0.1
RNF4-222ENST00000541204 MAGEB6P1A0A0J9YX57 407 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 SLU7O95391 586 aaKnown RBP14.41□□□□□ -0.1
RNF4-222ENST00000541204 ALX1Q15699 326 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 SLC4A8Q2Y0W8 1093 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 NUP133Q8WUM0 1156 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 FAM84BQ96KN1 310 aaPredicted RBP14.41□□□□□ -0.1
RNF4-222ENST00000541204 RTCBQ9Y3I0 505 aaKnown RBP14.41□□□□□ -0.1
RNF4-222ENST00000541204 RTL9Q8NET4 1388 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 WDR19Q8NEZ3 1342 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 RANBP6O60518 1105 aaKnown RBP14.41□□□□□ -0.1
RNF4-222ENST00000541204 PRDM1O75626 825 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 ATP1A3P13637 1013 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 RPS8P62241 208 aaKnown RBP14.41□□□□□ -0.1
RNF4-222ENST00000541204 TPM4P67936 248 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 FBXO38Q6PIJ6 1188 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 SYT10Q6XYQ8 523 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 ARHGEF1Q92888 912 aaKnown RBP14.41□□□□□ -0.1
RNF4-222ENST00000541204 TMEM87BQ96K49 555 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 NARFQ9UHQ1 456 aa14.41□□□□□ -0.1
RNF4-222ENST00000541204 MORC2Q9Y6X9 1032 aaPredicted RBP14.41□□□□□ -0.1
RNF4-222ENST00000541204 RPS6KA4O75676 772 aa14.4□□□□□ -0.1
RNF4-222ENST00000541204 IARSP41252 1262 aaKnown RBP14.4□□□□□ -0.1
RNF4-222ENST00000541204 COL1A1P02452 1464 aaPredicted RBP14.4□□□□□ -0.1
RNF4-222ENST00000541204 CNTNAP4Q9C0A0 1308 aa14.4□□□□□ -0.1
RNF4-222ENST00000541204 KIF2AO00139 706 aaPredicted RBP14.4□□□□□ -0.1
RNF4-222ENST00000541204 FANCCQ00597 558 aa14.4□□□□□ -0.1
RNF4-222ENST00000541204 UBE4AQ14139 1066 aa14.4□□□□□ -0.1
RNF4-222ENST00000541204 SLC39A14Q15043 492 aa14.4□□□□□ -0.1
RNF4-222ENST00000541204 KRT40Q6A162 431 aa14.4□□□□□ -0.1
RNF4-222ENST00000541204 CPLX2Q6PUV4 134 aaKnown RBP14.4□□□□□ -0.1
RNF4-222ENST00000541204 FAM217BQ9NTX9 383 aaPredicted RBP14.4□□□□□ -0.1
RNF4-222ENST00000541204 SYKP43405 635 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 EVX2Q03828 476 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 PPARAQ07869 468 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 MEX3CQ5U5Q3 659 aaKnown RBP14.39□□□□□ -0.11
RNF4-222ENST00000541204 HSD3B7Q9H2F3 369 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 KIF20AO95235 890 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 GNAT2P19087 354 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 GUCY1A2P33402 732 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 TXNRD3Q86VQ6 643 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 KRT23Q9C075 422 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 ZNF804BA4D1E1 1349 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 PNPLA7Q6ZV29 1317 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 CDKL5O76039 1030 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 WTAPQ15007 396 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 SHC4Q6S5L8 630 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 TPTE2Q6XPS3 522 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 ZNF384Q8TF68 577 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 CNNM2Q9H8M5 875 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 C4AP0C0L4 1744 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 C4BP0C0L5 1744 aa14.39□□□□□ -0.11
RNF4-222ENST00000541204 PSDA5PKW4 1024 aaPredicted RBP14.38□□□□□ -0.11
RNF4-222ENST00000541204 RFC4P35249 363 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 PNOCQ13519 176 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 NTRK3Q16288 839 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 LRRN4CLQ8ND94 238 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 DPF2Q92785 391 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 ERICH2A1L162 156 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 IKBKBO14920 756 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 PTPN21Q16825 1174 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 FNBP4Q8N3X1 1017 aaPredicted RBP14.38□□□□□ -0.11
RNF4-222ENST00000541204 STAG1Q8WVM7 1258 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 UBAC1Q9BSL1 405 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 NYXQ9GZU5 481 aa14.38□□□□□ -0.11
RNF4-222ENST00000541204 AATFQ9NY61 560 aaKnown RBP eCLIP14.38□□□□□ -0.11
RNF4-222ENST00000541204 TRIM29Q14134 588 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms