RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 TRIM42Q8IWZ5 723 aa11.91□□□□□ -0.5
LRP6-205ENST00000540527 NKAPQ8N5F7 415 aaKnown RBP11.91□□□□□ -0.5
LRP6-205ENST00000540527 CNTD1Q8N815 330 aa11.91□□□□□ -0.5
LRP6-205ENST00000540527 FBXO27Q8NI29 283 aa11.91□□□□□ -0.5
LRP6-205ENST00000540527 OXCT2Q9BYC2 517 aaPredicted RBP11.91□□□□□ -0.5
LRP6-205ENST00000540527 RETREG1Q9H6L5 497 aa11.91□□□□□ -0.5
LRP6-205ENST00000540527 RCAN3Q9UKA8 241 aa11.91□□□□□ -0.5
LRP6-205ENST00000540527 PNMA8BQ9ULN7 279 aaPredicted RBP11.91□□□□□ -0.5
LRP6-205ENST00000540527 ERC2O15083 957 aa11.9□□□□□ -0.5
LRP6-205ENST00000540527 CBFA2T2O43439 604 aa11.9□□□□□ -0.5
LRP6-205ENST00000540527 ORC4O43929 436 aa11.9□□□□□ -0.5
LRP6-205ENST00000540527 RHOBTB3O94955 611 aa11.9□□□□□ -0.5
LRP6-205ENST00000540527 EIF5P55010 431 aaKnown RBP11.9□□□□□ -0.5
LRP6-205ENST00000540527 FAM193AP78312 1265 aa11.9□□□□□ -0.5
LRP6-205ENST00000540527 PDE1CQ14123 709 aaPredicted RBP11.9□□□□□ -0.5
LRP6-205ENST00000540527 MPP2Q14168 576 aa11.9□□□□□ -0.5
LRP6-205ENST00000540527 TBC1D10BQ4KMP7 808 aaPredicted RBP11.9□□□□□ -0.5
LRP6-205ENST00000540527 RASSF3Q86WH2 238 aa11.9□□□□□ -0.5
LRP6-205ENST00000540527 EPN3Q9H201 632 aa11.9□□□□□ -0.5
LRP6-205ENST00000540527 BCS1LQ9Y276 419 aa11.9□□□□□ -0.5
LRP6-205ENST00000540527 ABHD14A-ACY1A0A1B0GW23 586 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 FAM83GA6ND36 823 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 F13A1P00488 732 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 SDSP20132 328 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 LINC01559Q495D7 138 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 CCDC24Q8N4L8 307 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 CDK5RAP3Q96JB5 506 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.89□□□□□ -0.51
LRP6-205ENST00000540527 CHRDQ9H2X0 955 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 ELP3Q9H9T3 547 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
LRP6-205ENST00000540527 MAN1C1Q9NR34 630 aa11.89□□□□□ -0.51
LRP6-205ENST00000540527 CWC25Q9NXE8 425 aaPredicted RBP11.89□□□□□ -0.51
LRP6-205ENST00000540527 A0A1W2PQH9 124 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 POTEMA6NI47 508 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 UPK3BL1B0FP48 263 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 UPK3BL2E5RIL1 263 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
LRP6-205ENST00000540527 RPS26P62854 115 aaKnown RBP11.88□□□□□ -0.51
LRP6-205ENST00000540527 GRM3Q14832 879 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 ELF2Q15723 593 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 GPR158Q5T848 1215 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 POTEGQ6S5H5 508 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 MAATS1Q7Z4T9 603 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 ZSCAN30Q86W11 494 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 EXOC2Q96KP1 924 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 TNIP3Q96KP6 325 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 TBATAQ96M53 351 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 TSPAN18Q96SJ8 248 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 SPSB2Q99619 263 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 MRPL4Q9BYD3 311 aaKnown RBP11.88□□□□□ -0.51
LRP6-205ENST00000540527 EHD4Q9H223 541 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 FAM50BQ9Y247 325 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 PCDHB3Q9Y5E6 796 aa11.88□□□□□ -0.51
LRP6-205ENST00000540527 hCG_1984214I3L0E3 225 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 CELA3AP09093 270 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 POU3F2P20265 443 aaPredicted RBP11.87□□□□□ -0.51
LRP6-205ENST00000540527 L1CAMP32004 1257 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 TBX2Q13207 712 aaPredicted RBP11.87□□□□□ -0.51
LRP6-205ENST00000540527 SLC9A5Q14940 896 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 TLR1Q15399 786 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 SLC10A6Q3KNW5 377 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 FOXB2Q5VYV0 432 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 GATAD2BQ8WXI9 593 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 L3MBTL2Q969R5 705 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 PGBD4Q96DM1 585 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 XAGE2Q96GT9 111 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 CEP44Q9C0F1 390 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 SAGE1Q9NXZ1 904 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 DMTF1Q9Y222 760 aa11.87□□□□□ -0.51
LRP6-205ENST00000540527 EREGO14944 169 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 PMM2O15305 246 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 SNX2O60749 519 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 SETSIPP0DME0 302 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 GTF2A2P52657 109 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 BNC2Q6ZN30 1099 aaPredicted RBP11.86□□□□□ -0.51
LRP6-205ENST00000540527 GK5Q6ZS86 529 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 CLIP3Q96DZ5 547 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 DHRS4Q9BTZ2 278 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 TMEM63CQ9P1W3 806 aa11.86□□□□□ -0.51
LRP6-205ENST00000540527 SETD1BQ9UPS6 1966 aaKnown RBP11.85□□□□□ -0.51
LRP6-205ENST00000540527 A0A087WZG4 1122 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 TNFAIP3P21580 790 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 TMPRSS15P98073 1019 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 CLCQ05315 142 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 PKN3Q6P5Z2 889 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 CASC1Q6TDU7 716 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 C16orf54Q6UWD8 224 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 TPTE2Q6XPS3 522 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 FCHSD1Q86WN1 690 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 ZNF295-AS1Q8N0V1 137 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 BRMS1Q9HCU9 246 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 RIC8AQ9NPQ8 531 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 ANKRD6Q9Y2G4 727 aa11.85□□□□□ -0.51
LRP6-205ENST00000540527 FRMPD2Q68DX3 1309 aaPredicted RBP11.85□□□□□ -0.51
LRP6-205ENST00000540527 TGFBR3LH3BV60 316 aa11.84□□□□□ -0.51
LRP6-205ENST00000540527 VEGFBP49765 207 aa11.84□□□□□ -0.51
LRP6-205ENST00000540527 NUCB1Q02818 461 aa11.84□□□□□ -0.51
LRP6-205ENST00000540527 GTF2H3Q13889 308 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms