RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 FOXN1O15353 648 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 IARSP41252 1262 aaKnown RBP20.05■□□□□ 0.8
RAB40C-205ENST00000539661 PIP4K2BP78356 416 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 MTF1Q14872 753 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 APOA5Q6Q788 366 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 LZTFL1Q9NQ48 299 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 NLRP2Q9NX02 1062 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 CEP126Q9P2H0 1117 aa20.05■□□□□ 0.8
RAB40C-205ENST00000539661 PUF60Q9UHX1 559 aaKnown RBP20.05■□□□□ 0.8
RAB40C-205ENST00000539661 TTF2Q9UNY4 1162 aaKnown RBP20.05■□□□□ 0.8
RAB40C-205ENST00000539661 FECHP22830 423 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 HSP90AA4PQ58FG1 418 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 RAD9BQ6WBX8 426 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 SPATA20Q8TB22 786 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 RAPGEF4Q8WZA2 1011 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 TMEM87BQ96K49 555 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 TEX13AQ9BXU3 409 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-205ENST00000539661 IRX2Q9BZI1 471 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-205ENST00000539661 ZSWIM4Q9H7M6 989 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 ABCB6Q9NP58 842 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 MED4Q9NPJ6 270 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.04■□□□□ 0.8
RAB40C-205ENST00000539661 MYO1AQ9UBC5 1043 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 FBXO3Q9UK99 471 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 TJP1Q07157 1748 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 MYH7P12883 1935 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 RGPD5Q99666 1765 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 PTPREP23469 700 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 NTRK3Q16288 839 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 HSP90B2PQ58FF3 399 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 STK11IPQ8N1F8 1099 aa20.04■□□□□ 0.8
RAB40C-205ENST00000539661 WDR17Q8IZU2 1322 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 PBX1P40424 430 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 KIF4BQ2VIQ3 1234 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 NOSTRINQ8IVI9 506 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 WASF1Q92558 559 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 CTAGE1Q96RT6 745 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 PUS7LQ9H0K6 701 aaKnown RBP20.03■□□□□ 0.8
RAB40C-205ENST00000539661 SAMSN1Q9NSI8 373 aaKnown RBP20.03■□□□□ 0.8
RAB40C-205ENST00000539661 C1orf167Q5SNV9 1468 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 GPAA1O43292 621 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 MAGEA9P43362 315 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 ZNF569Q5MCW4 686 aa20.03■□□□□ 0.8
RAB40C-205ENST00000539661 FBXO2Q9UK22 296 aaPredicted RBP20.03■□□□□ 0.8
RAB40C-205ENST00000539661 SEMA3EO15041 775 aa20.02■□□□□ 0.8
RAB40C-205ENST00000539661 CASP8Q14790 479 aa20.02■□□□□ 0.8
RAB40C-205ENST00000539661 IGSF22Q8N9C0 903 aa20.02■□□□□ 0.8
RAB40C-205ENST00000539661 MED15Q96RN5 788 aa20.02■□□□□ 0.8
RAB40C-205ENST00000539661 SERTAD1Q9UHV2 236 aa20.02■□□□□ 0.8
RAB40C-205ENST00000539661 FAN1Q9Y2M0 1017 aa20.02■□□□□ 0.8
RAB40C-205ENST00000539661 CTAGE15A4D2H0 777 aa20.02■□□□□ 0.79
RAB40C-205ENST00000539661 ZBTB43O43298 467 aa20.02■□□□□ 0.79
RAB40C-205ENST00000539661 PRR29P0C7W0 189 aa20.02■□□□□ 0.79
RAB40C-205ENST00000539661 CTAGE8P0CG41 777 aa20.02■□□□□ 0.79
RAB40C-205ENST00000539661 ATF3P18847 181 aa20.02■□□□□ 0.79
RAB40C-205ENST00000539661 APTXQ7Z2E3 356 aaKnown RBP20.02■□□□□ 0.79
RAB40C-205ENST00000539661 CTAGE6Q86UF2 777 aa20.02■□□□□ 0.79
RAB40C-205ENST00000539661 CNGA4Q8IV77 575 aa20.02■□□□□ 0.79
RAB40C-205ENST00000539661 CTAGE4Q8IX94 777 aa20.02■□□□□ 0.79
RAB40C-205ENST00000539661 TRMT44Q8IYL2 757 aaKnown RBP20.02■□□□□ 0.79
RAB40C-205ENST00000539661 PHKBQ93100 1093 aa20.02■□□□□ 0.79
RAB40C-205ENST00000539661 POLR2DO15514 142 aaKnown RBP20.01■□□□□ 0.79
RAB40C-205ENST00000539661 MFAP3LO75121 409 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 RBL2Q08999 1139 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 SPATA1Q5VX52 437 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 SGMS1Q86VZ5 419 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 NAPGQ99747 312 aaPredicted RBP20.01■□□□□ 0.79
RAB40C-205ENST00000539661 NBPF3Q9H094 633 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 NUP188Q5SRE5 1749 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 UBN2Q6ZU65 1347 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 PARP4Q9UKK3 1724 aaKnown RBP20.01■□□□□ 0.79
RAB40C-205ENST00000539661 RILPL1Q5EBL4 403 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 SLC9C2Q5TAH2 1124 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 WDR93Q6P2C0 686 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 CYB5R4Q7L1T6 521 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 IFNL2Q8IZJ0 200 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 VIPAS39Q9H9C1 493 aa20.01■□□□□ 0.79
RAB40C-205ENST00000539661 ITIH6Q6UXX5 1313 aa20■□□□□ 0.79
RAB40C-205ENST00000539661 TATP17735 454 aaPredicted RBP20■□□□□ 0.79
RAB40C-205ENST00000539661 MAPK8IP2Q13387 824 aaPredicted RBP20■□□□□ 0.79
RAB40C-205ENST00000539661 SAFBQ15424 915 aaKnown RBP eCLIP20■□□□□ 0.79
RAB40C-205ENST00000539661 XAGE2Q96GT9 111 aa20■□□□□ 0.79
RAB40C-205ENST00000539661 DDX24Q9GZR7 859 aaKnown RBP eCLIP20■□□□□ 0.79
RAB40C-205ENST00000539661 ATRNO75882 1429 aa20■□□□□ 0.79
RAB40C-205ENST00000539661 SSRP1Q08945 709 aaKnown RBP20■□□□□ 0.79
RAB40C-205ENST00000539661 FILIP1LQ4L180 1135 aa20■□□□□ 0.79
RAB40C-205ENST00000539661 ZNF594Q96JF6 807 aaPredicted RBP20■□□□□ 0.79
RAB40C-205ENST00000539661 DCAF5Q96JK2 942 aa20■□□□□ 0.79
RAB40C-205ENST00000539661 ADD3Q9UEY8 706 aaKnown RBP20■□□□□ 0.79
RAB40C-205ENST00000539661 GOLGA8AA7E2F4 631 aa19.99■□□□□ 0.79
RAB40C-205ENST00000539661 ACTN4O43707 911 aaKnown RBP19.99■□□□□ 0.79
RAB40C-205ENST00000539661 RANBP6O60518 1105 aaKnown RBP19.99■□□□□ 0.79
RAB40C-205ENST00000539661 VSNL1P62760 191 aa19.99■□□□□ 0.79
RAB40C-205ENST00000539661 TEX33O43247 280 aa19.99■□□□□ 0.79
RAB40C-205ENST00000539661 FMNL1O95466 1100 aaPredicted RBP19.99■□□□□ 0.79
RAB40C-205ENST00000539661 ZNF827Q17R98 1081 aa19.99■□□□□ 0.79
RAB40C-205ENST00000539661 MICU3Q86XE3 530 aa19.99■□□□□ 0.79
RAB40C-205ENST00000539661 TMTC1Q8IUR5 882 aa19.99■□□□□ 0.79
RAB40C-205ENST00000539661 SLC35F6Q8N357 371 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms