RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 NBPF4Q96M43 638 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 TMEM63CQ9P1W3 806 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 RGS17Q9UGC6 210 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-208ENST00000538266 DCTN4Q9UJW0 460 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 WNK3Q9BYP7 1800 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 IGSF1Q8N6C5 1336 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 RGPD1P0DJD0 1748 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 ARHGEF15O94989 841 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 HMOX1P09601 288 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 AMPD1P23109 780 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 MAPK1P28482 360 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 IL13P35225 146 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 MARSP56192 900 aaKnown RBP5.67□□□□□ -1.5
SNHG1-208ENST00000538266 PLAURQ03405 335 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 SULT6B1Q6IMI4 303 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 GJD3Q8N144 294 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 TRPM4Q8TD43 1214 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 PNNQ9H307 717 aaKnown RBP5.67□□□□□ -1.5
SNHG1-208ENST00000538266 DNAJB12Q9NXW2 375 aaKnown RBP5.67□□□□□ -1.5
SNHG1-208ENST00000538266 CNTN3Q9P232 1028 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 KDRP35968 1356 aa5.67□□□□□ -1.5
SNHG1-208ENST00000538266 LRRC37A3O60309 1634 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 OVOS2A0A0G2JMS6 1433 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 NCAPD2Q15021 1401 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 THSD7AQ9UPZ6 1657 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 MEGF6O75095 1541 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 LOC102724428A0A0B4J2F2 783 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 SHISA8B8ZZ34 492 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 J3QW42 95 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 TNFRSF21O75509 655 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 CES1P23141 567 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 ADH7P40394 386 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 SIK1P57059 783 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 MLLT1Q03111 559 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-208ENST00000538266 DDB1Q16531 1140 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 HFE2Q6ZVN8 426 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 FAM35AQ86V20 835 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 C1orf127Q8N9H9 656 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 OR13H1Q8NG92 308 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 PMEPA1Q969W9 287 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 RBCK1Q9BYM8 510 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 SPG7Q9UQ90 795 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 PCDH11XQ9BZA7 1347 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 PCDH11YQ9BZA8 1340 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 MAPK8IP3Q9UPT6 1336 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 PLEKHG2Q9H7P9 1386 aa5.66□□□□□ -1.5
SNHG1-208ENST00000538266 DISP2A7MBM2 1401 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 RGS12O14924 1447 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 TNS2Q63HR2 1409 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 PHF20L1A8MW92 1017 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 CCER2I3L3R5 266 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 EXOC5O00471 708 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 CYP2E1P05181 493 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-208ENST00000538266 NEFLP07196 543 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 CPB1P15086 417 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 PRKAR2BP31323 418 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 NRLP54845 237 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 GPLD1P80108 840 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 PLCB3Q01970 1234 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 AMOTQ4VCS5 1084 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 PLEKHO1Q53GL0 409 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-208ENST00000538266 C1orf141Q5JVX7 400 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 CHSY3Q70JA7 882 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 ZSCAN29Q8IWY8 852 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-208ENST00000538266 ZCRB1Q8TBF4 217 aaKnown RBP5.65□□□□□ -1.5
SNHG1-208ENST00000538266 NSUN5Q96P11 429 aaKnown RBP5.65□□□□□ -1.5
SNHG1-208ENST00000538266 MDFIQ99750 246 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 NIF3L1Q9GZT8 377 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 RRAGCQ9HB90 399 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 SLC6A14Q9UN76 642 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 ADAMTS8Q9UP79 889 aa5.65□□□□□ -1.5
SNHG1-208ENST00000538266 PKD1L3Q7Z443 1732 aa5.65□□□□□ -1.51
SNHG1-208ENST00000538266 FAM181BA6NEQ2 426 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 PHACTR2O75167 634 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 SOX18P35713 384 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 HYAL2Q12891 473 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 ZNF530Q6P9A1 599 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-208ENST00000538266 KRT27Q7Z3Y8 459 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 TMC7Q7Z402 723 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 NCAPG2Q86XI2 1143 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 DDX54Q8TDD1 881 aaKnown RBP5.64□□□□□ -1.51
SNHG1-208ENST00000538266 SPACA7Q96KW9 195 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 DMRTB1Q96MA1 342 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 FAM129BQ96TA1 746 aa5.64□□□□□ -1.51
SNHG1-208ENST00000538266 FOXD3Q9UJU5 478 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-208ENST00000538266 BRWD3Q6RI45 1802 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 GHRHP01286 108 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 HSP90AB1P08238 724 aaKnown RBP5.63□□□□□ -1.51
SNHG1-208ENST00000538266 CCDC184Q52MB2 194 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 PSAPL1Q6NUJ1 521 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 ELMSAN1Q6PJG2 1045 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 FAM9BQ8IZU0 186 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 NUDT8Q8WV74 236 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 RUNDC1Q96C34 613 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 ZFYVE28Q9HCC9 887 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 KANSL3Q9P2N6 904 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 STARD13Q9Y3M8 1113 aa5.63□□□□□ -1.51
SNHG1-208ENST00000538266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-208ENST00000538266 EREGO14944 169 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 RGS9O75916 674 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms