RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 COA7Q96BR5 231 aa26.33■■□□□ 1.81
SSH3-211ENST00000534112 DEFB118Q96PH6 123 aa26.33■■□□□ 1.81
SSH3-211ENST00000534112 OSBPL5Q9H0X9 879 aaPredicted RBP26.33■■□□□ 1.81
SSH3-211ENST00000534112 PRO3102Q9H379 93 aa26.33■■□□□ 1.81
SSH3-211ENST00000534112 PNMA3Q9UL41 463 aa26.33■■□□□ 1.81
SSH3-211ENST00000534112 ZBTB7BO15156 539 aaPredicted RBP26.32■■□□□ 1.8
SSH3-211ENST00000534112 FAM110CQ1W6H9 321 aa26.32■■□□□ 1.8
SSH3-211ENST00000534112 GORABQ5T7V8 394 aa26.32■■□□□ 1.8
SSH3-211ENST00000534112 ZNF280CQ8ND82 737 aa26.32■■□□□ 1.8
SSH3-211ENST00000534112 TAOK2Q9UL54 1235 aa26.32■■□□□ 1.8
SSH3-211ENST00000534112 CAPN2P17655 700 aa26.31■■□□□ 1.8
SSH3-211ENST00000534112 PAK6Q9NQU5 681 aaPredicted RBP26.31■■□□□ 1.8
SSH3-211ENST00000534112 RAI14Q9P0K7 980 aa26.31■■□□□ 1.8
SSH3-211ENST00000534112 ARID4AP29374 1257 aaPredicted RBP26.29■■□□□ 1.8
SSH3-211ENST00000534112 CAP2P40123 477 aa26.29■■□□□ 1.8
SSH3-211ENST00000534112 RRP1BQ14684 758 aaKnown RBP26.29■■□□□ 1.8
SSH3-211ENST00000534112 TBC1D2Q9BYX2 928 aa26.29■■□□□ 1.8
SSH3-211ENST00000534112 MGAMO43451 1857 aa26.29■■□□□ 1.8
SSH3-211ENST00000534112 GCLCP48506 637 aaPredicted RBP26.28■■□□□ 1.8
SSH3-211ENST00000534112 HMGCS2P54868 508 aa26.28■■□□□ 1.8
SSH3-211ENST00000534112 TEX11Q8IYF3 940 aa26.28■■□□□ 1.8
SSH3-211ENST00000534112 CRISPLD2Q9H0B8 497 aa26.28■■□□□ 1.8
SSH3-211ENST00000534112 DOCK1Q14185 1865 aa26.28■■□□□ 1.8
SSH3-211ENST00000534112 USP17L5A8MUK1 530 aa26.27■■□□□ 1.8
SSH3-211ENST00000534112 EVI5O60447 810 aa26.27■■□□□ 1.8
SSH3-211ENST00000534112 MCAMP43121 646 aa26.27■■□□□ 1.8
SSH3-211ENST00000534112 PABPC4Q13310 644 aaKnown RBP eCLIP26.27■■□□□ 1.8
SSH3-211ENST00000534112 PHIPQ8WWQ0 1821 aa26.27■■□□□ 1.8
SSH3-211ENST00000534112 PTPRFP10586 1907 aa26.26■■□□□ 1.79
SSH3-211ENST00000534112 COL2A1P02458 1487 aaPredicted RBP26.26■■□□□ 1.79
SSH3-211ENST00000534112 GNAI2P04899 355 aa26.26■■□□□ 1.79
SSH3-211ENST00000534112 G3BP1Q13283 466 aaKnown RBP eCLIP26.26■■□□□ 1.79
SSH3-211ENST00000534112 ASCC2Q9H1I8 757 aaPredicted RBP26.26■■□□□ 1.79
SSH3-211ENST00000534112 LRP2BPQ9P2M1 347 aa26.26■■□□□ 1.79
SSH3-211ENST00000534112 PNMA6EA0A0J9YXQ4 647 aa26.25■■□□□ 1.79
SSH3-211ENST00000534112 UQCRFS1P1P0C7P4 283 aa26.25■■□□□ 1.79
SSH3-211ENST00000534112 SH3D19Q5HYK7 790 aa26.25■■□□□ 1.79
SSH3-211ENST00000534112 SH3RF3Q8TEJ3 882 aaPredicted RBP26.25■■□□□ 1.79
SSH3-211ENST00000534112 PAWRQ96IZ0 340 aaKnown RBP26.25■■□□□ 1.79
SSH3-211ENST00000534112 PI4KBQ9UBF8 816 aa26.25■■□□□ 1.79
SSH3-211ENST00000534112 HERC5Q9UII4 1024 aaKnown RBP26.25■■□□□ 1.79
SSH3-211ENST00000534112 GJD2Q9UKL4 321 aa26.25■■□□□ 1.79
SSH3-211ENST00000534112 IPO8O15397 1037 aaKnown RBP26.24■■□□□ 1.79
SSH3-211ENST00000534112 TRIM27P14373 513 aa26.24■■□□□ 1.79
SSH3-211ENST00000534112 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.24■■□□□ 1.79
SSH3-211ENST00000534112 AS3MTQ9HBK9 375 aa26.23■■□□□ 1.79
SSH3-211ENST00000534112 LAMA3Q16787 3333 aa26.22■■□□□ 1.79
SSH3-211ENST00000534112 HMGCRP04035 888 aa26.22■■□□□ 1.79
SSH3-211ENST00000534112 NECAB2Q7Z6G3 386 aa26.22■■□□□ 1.79
SSH3-211ENST00000534112 NOL10Q9BSC4 688 aaKnown RBP26.22■■□□□ 1.79
SSH3-211ENST00000534112 WDR18Q9BV38 432 aa26.22■■□□□ 1.79
SSH3-211ENST00000534112 DHX36Q9H2U1 1008 aaKnown RBP26.22■■□□□ 1.79
SSH3-211ENST00000534112 TNNQ9UQP3 1299 aa26.22■■□□□ 1.79
SSH3-211ENST00000534112 DOCK3Q8IZD9 2030 aa26.22■■□□□ 1.79
SSH3-211ENST00000534112 NAA16Q6N069 864 aaPredicted RBP26.21■■□□□ 1.79
SSH3-211ENST00000534112 ATF7IPQ6VMQ6 1270 aa26.21■■□□□ 1.79
SSH3-211ENST00000534112 DIS3LQ8TF46 1054 aaKnown RBP26.21■■□□□ 1.79
SSH3-211ENST00000534112 SNRKQ9NRH2 765 aa26.21■■□□□ 1.79
SSH3-211ENST00000534112 AATFQ9NY61 560 aaKnown RBP eCLIP26.21■■□□□ 1.79
SSH3-211ENST00000534112 A0A1W2PPC1 479 aa26.2■■□□□ 1.78
SSH3-211ENST00000534112 BAG3O95817 575 aa26.2■■□□□ 1.78
SSH3-211ENST00000534112 BACE1P56817 501 aa26.2■■□□□ 1.78
SSH3-211ENST00000534112 MORF4L1Q9UBU8 362 aa26.2■■□□□ 1.78
SSH3-211ENST00000534112 STAP2Q9UGK3 403 aa26.2■■□□□ 1.78
SSH3-211ENST00000534112 PLCG2P16885 1265 aa26.19■■□□□ 1.78
SSH3-211ENST00000534112 PPP4CP60510 307 aa26.19■■□□□ 1.78
SSH3-211ENST00000534112 TRIM32Q13049 653 aa26.19■■□□□ 1.78
SSH3-211ENST00000534112 MTMR2Q13614 643 aa26.19■■□□□ 1.78
SSH3-211ENST00000534112 TGFBRAP1Q8WUH2 860 aa26.19■■□□□ 1.78
SSH3-211ENST00000534112 FRAT1Q92837 279 aaPredicted RBP26.19■■□□□ 1.78
SSH3-211ENST00000534112 HMX1Q9NP08 348 aaPredicted RBP26.19■■□□□ 1.78
SSH3-211ENST00000534112 RPTORQ8N122 1335 aa26.18■■□□□ 1.78
SSH3-211ENST00000534112 BCAR3O75815 825 aa26.18■■□□□ 1.78
SSH3-211ENST00000534112 ASNSP08243 561 aa26.18■■□□□ 1.78
SSH3-211ENST00000534112 HOXA7P31268 230 aaPredicted RBP26.18■■□□□ 1.78
SSH3-211ENST00000534112 IRX3P78415 501 aaPredicted RBP26.18■■□□□ 1.78
SSH3-211ENST00000534112 JAG1P78504 1218 aa26.18■■□□□ 1.78
SSH3-211ENST00000534112 METTL16Q86W50 562 aaKnown RBP26.18■■□□□ 1.78
SSH3-211ENST00000534112 FOXP4Q8IVH2 680 aaPredicted RBP26.18■■□□□ 1.78
SSH3-211ENST00000534112 MAPKAPK5Q8IW41 473 aa26.18■■□□□ 1.78
SSH3-211ENST00000534112 ANKLE1Q8NAG6 615 aa26.18■■□□□ 1.78
SSH3-211ENST00000534112 CLUAP1Q96AJ1 413 aa26.18■■□□□ 1.78
SSH3-211ENST00000534112 P2RX7Q99572 595 aaKnown RBP26.18■■□□□ 1.78
SSH3-211ENST00000534112 GPR108Q9NPR9 543 aa26.18■■□□□ 1.78
SSH3-211ENST00000534112 TMOD4Q9NZQ9 345 aa26.18■■□□□ 1.78
SSH3-211ENST00000534112 TTC39AQ5SRH9 613 aa26.17■■□□□ 1.78
SSH3-211ENST00000534112 DNAJC18Q9H819 358 aa26.17■■□□□ 1.78
SSH3-211ENST00000534112 TNNI3KQ59H18 835 aa26.16■■□□□ 1.78
SSH3-211ENST00000534112 CCDC158Q5M9N0 1113 aa26.16■■□□□ 1.78
SSH3-211ENST00000534112 ADGRA1Q86SQ6 560 aa26.16■■□□□ 1.78
SSH3-211ENST00000534112 DBNDD2Q9BQY9 259 aa26.16■■□□□ 1.78
SSH3-211ENST00000534112 FPGT-TNNI3KV9GXZ4 949 aa26.16■■□□□ 1.78
SSH3-211ENST00000534112 FLT1P17948 1338 aa26.15■■□□□ 1.78
SSH3-211ENST00000534112 LOC285556D6RIA3 1793 aa26.15■■□□□ 1.78
SSH3-211ENST00000534112 C19orf81C9J6K1 198 aa26.15■■□□□ 1.78
SSH3-211ENST00000534112 PEX10O60683 326 aa26.15■■□□□ 1.78
SSH3-211ENST00000534112 CYP2E1P05181 493 aaPredicted RBP26.15■■□□□ 1.78
SSH3-211ENST00000534112 CYP2B6P20813 491 aa26.15■■□□□ 1.78
SSH3-211ENST00000534112 GPRC5AQ8NFJ5 357 aa26.15■■□□□ 1.78
SSH3-211ENST00000534112 TRIB2Q92519 343 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms