RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 MYBBP1AQ9BQG0 1328 aaKnown RBP16.35■□□□□ 0.21
CLNS1A-211ENST00000532069 GRM8O00222 908 aa16.34■□□□□ 0.21
CLNS1A-211ENST00000532069 MAP3K10Q02779 954 aa16.34■□□□□ 0.21
CLNS1A-211ENST00000532069 THEGQ9P2T0 379 aa16.34■□□□□ 0.21
CLNS1A-211ENST00000532069 SYNGAP1Q96PV0 1343 aa16.34■□□□□ 0.21
CLNS1A-211ENST00000532069 ATRNL1Q5VV63 1379 aa16.34■□□□□ 0.21
CLNS1A-211ENST00000532069 PDE8BO95263 885 aa16.33■□□□□ 0.2
CLNS1A-211ENST00000532069 RTP1P59025 263 aa16.33■□□□□ 0.2
CLNS1A-211ENST00000532069 IRX3P78415 501 aaPredicted RBP16.33■□□□□ 0.2
CLNS1A-211ENST00000532069 UHRF1Q96T88 793 aaPredicted RBP16.33■□□□□ 0.2
CLNS1A-211ENST00000532069 IDI2Q9BXS1 227 aa16.33■□□□□ 0.2
CLNS1A-211ENST00000532069 ASCC2Q9H1I8 757 aaPredicted RBP16.33■□□□□ 0.2
CLNS1A-211ENST00000532069 CWC22Q9HCG8 908 aaKnown RBP16.33■□□□□ 0.2
CLNS1A-211ENST00000532069 DNM1LO00429 736 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 LDHBP07195 334 aaKnown RBP16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 CCND3P30281 292 aaPredicted RBP16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 RGS3P49796 1198 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 C9orf50Q5SZB4 431 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 MFSD14CQ5VZR4 134 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 ZNF280CQ8ND82 737 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 GPRC5AQ8NFJ5 357 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 ADAMTS19Q8TE59 1207 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 GTF3C2Q8WUA4 911 aaPredicted RBP16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 GAS2L1Q99501 681 aaPredicted RBP16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 APBA2Q99767 749 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 PUS3Q9BZE2 481 aaKnown RBP16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 OSBPL5Q9H0X9 879 aaPredicted RBP16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 ATP11BQ9Y2G3 1177 aa16.32■□□□□ 0.2
CLNS1A-211ENST00000532069 APAF1O14727 1248 aa16.31■□□□□ 0.2
CLNS1A-211ENST00000532069 MRPS5P82675 430 aaKnown RBP16.31■□□□□ 0.2
CLNS1A-211ENST00000532069 EPHA10Q5JZY3 1008 aa16.31■□□□□ 0.2
CLNS1A-211ENST00000532069 SLF2Q8IX21 1173 aa16.31■□□□□ 0.2
CLNS1A-211ENST00000532069 LPAR1Q92633 364 aa16.31■□□□□ 0.2
CLNS1A-211ENST00000532069 ASB2Q96Q27 587 aa16.31■□□□□ 0.2
CLNS1A-211ENST00000532069 PRDM5Q9NQX1 630 aaPredicted RBP16.31■□□□□ 0.2
CLNS1A-211ENST00000532069 ATAD5Q96QE3 1844 aa16.31■□□□□ 0.2
CLNS1A-211ENST00000532069 DNAH12Q6ZR08 3092 aa16.3■□□□□ 0.2
CLNS1A-211ENST00000532069 GLRX3O76003 335 aaKnown RBP16.3■□□□□ 0.2
CLNS1A-211ENST00000532069 HMGCS2P54868 508 aa16.3■□□□□ 0.2
CLNS1A-211ENST00000532069 SPP2Q13103 211 aa16.3■□□□□ 0.2
CLNS1A-211ENST00000532069 PUM3Q15397 648 aaKnown RBP16.3■□□□□ 0.2
CLNS1A-211ENST00000532069 DIXDC1Q155Q3 683 aa16.3■□□□□ 0.2
CLNS1A-211ENST00000532069 BEND3Q5T5X7 828 aa16.3■□□□□ 0.2
CLNS1A-211ENST00000532069 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
CLNS1A-211ENST00000532069 TBC1D12O60347 775 aa16.29■□□□□ 0.2
CLNS1A-211ENST00000532069 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
CLNS1A-211ENST00000532069 ZGPATQ8N5A5 531 aaKnown RBP16.29■□□□□ 0.2
CLNS1A-211ENST00000532069 ARRDC4Q8NCT1 418 aa16.29■□□□□ 0.2
CLNS1A-211ENST00000532069 BADQ92934 168 aa16.29■□□□□ 0.2
CLNS1A-211ENST00000532069 GNL3LQ9NVN8 582 aaKnown RBP16.29■□□□□ 0.2
CLNS1A-211ENST00000532069 TMOD4Q9NZQ9 345 aa16.29■□□□□ 0.2
CLNS1A-211ENST00000532069 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
CLNS1A-211ENST00000532069 MYH2Q9UKX2 1941 aa16.29■□□□□ 0.2
CLNS1A-211ENST00000532069 RLFQ13129 1914 aa16.28■□□□□ 0.2
CLNS1A-211ENST00000532069 KBTBD13C9JR72 458 aa16.28■□□□□ 0.2
CLNS1A-211ENST00000532069 SLC5A1P13866 664 aa16.28■□□□□ 0.2
CLNS1A-211ENST00000532069 AKNAD1Q5T1N1 836 aa16.28■□□□□ 0.2
CLNS1A-211ENST00000532069 PLEKHH3Q7Z736 793 aa16.28■□□□□ 0.2
CLNS1A-211ENST00000532069 ZFPM1Q8IX07 1006 aa16.28■□□□□ 0.2
CLNS1A-211ENST00000532069 USP38Q8NB14 1042 aa16.28■□□□□ 0.2
CLNS1A-211ENST00000532069 TSPYL2Q9H2G4 693 aaPredicted RBP16.28■□□□□ 0.2
CLNS1A-211ENST00000532069 UTYO14607 1347 aa16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 USP17L5A8MUK1 530 aa16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 ALDH1L1O75891 902 aa16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 CNGA1P29973 690 aa16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 GRIN2CQ14957 1233 aa16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 GPR142Q7Z601 462 aa16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 VGLL2Q8N8G2 317 aa16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 USP6NLQ92738 828 aa16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLNS1A-211ENST00000532069 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
CLNS1A-211ENST00000532069 DNAJB2P25686 324 aa16.26■□□□□ 0.19
CLNS1A-211ENST00000532069 PRDX5P30044 214 aa16.26■□□□□ 0.19
CLNS1A-211ENST00000532069 HOXA7P31268 230 aaPredicted RBP16.26■□□□□ 0.19
CLNS1A-211ENST00000532069 MORN1Q5T089 497 aa16.26■□□□□ 0.19
CLNS1A-211ENST00000532069 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
CLNS1A-211ENST00000532069 LPIN2Q92539 896 aa16.26■□□□□ 0.19
CLNS1A-211ENST00000532069 ZNF576Q9H609 170 aa16.26■□□□□ 0.19
CLNS1A-211ENST00000532069 NCOR1O75376 2440 aa16.26■□□□□ 0.19
CLNS1A-211ENST00000532069 DDTLA6NHG4 134 aaPredicted RBP16.25■□□□□ 0.19
CLNS1A-211ENST00000532069 HERVK_113P62684 666 aa16.25■□□□□ 0.19
CLNS1A-211ENST00000532069 ERVK-9P63128 1117 aa16.25■□□□□ 0.19
CLNS1A-211ENST00000532069 ERVK-24P63145 666 aa16.25■□□□□ 0.19
CLNS1A-211ENST00000532069 CCNA1P78396 465 aa16.25■□□□□ 0.19
CLNS1A-211ENST00000532069 MAP2K5Q13163 448 aa16.25■□□□□ 0.19
CLNS1A-211ENST00000532069 CCL14Q16627 93 aa16.25■□□□□ 0.19
CLNS1A-211ENST00000532069 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
CLNS1A-211ENST00000532069 EDC3Q96F86 508 aaKnown RBP16.25■□□□□ 0.19
CLNS1A-211ENST00000532069 SEMA3EO15041 775 aa16.24■□□□□ 0.19
CLNS1A-211ENST00000532069 PICALMQ13492 652 aa16.24■□□□□ 0.19
CLNS1A-211ENST00000532069 LRRC24Q50LG9 513 aa16.24■□□□□ 0.19
CLNS1A-211ENST00000532069 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
CLNS1A-211ENST00000532069 PPM1EQ8WY54 764 aa16.24■□□□□ 0.19
CLNS1A-211ENST00000532069 PDLIM7Q9NR12 457 aa16.24■□□□□ 0.19
CLNS1A-211ENST00000532069 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms