RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 AP5Z1O43299 807 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 PRPF3O43395 683 aaKnown RBP12.36□□□□□ -0.43
PUF60-213ENST00000528999 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
PUF60-213ENST00000528999 ZNF202O95125 648 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 BMP15O95972 392 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 LDHCP07864 332 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 NDUFA8P51970 172 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 TPM4P67936 248 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
PUF60-213ENST00000528999 GRAPQ13588 217 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 CATIPQ7Z7H3 387 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 NOSTRINQ8IVI9 506 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 GRAPLQ8TC17 118 aaPredicted RBP12.36□□□□□ -0.43
PUF60-213ENST00000528999 TRIM5Q9C035 493 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
PUF60-213ENST00000528999 DNAJC25Q9H1X3 360 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 SENP2Q9HC62 589 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
PUF60-213ENST00000528999 IRS2Q9Y4H2 1338 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 MINDY4BA8MYZ0 360 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 NLRP12P59046 1061 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 PPP4CP60510 307 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 PLCB2Q00722 1185 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 MECOMQ03112 1051 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 NOLC1Q14978 699 aaKnown RBP eCLIP12.35□□□□□ -0.43
PUF60-213ENST00000528999 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
PUF60-213ENST00000528999 RESP18Q5W5W9 173 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 CTR9Q6PD62 1173 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 BICDL1Q6ZP65 573 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 ADGRA1Q86SQ6 560 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 ANKS1AQ92625 1134 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 PHKBQ93100 1093 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 TOMM22Q9NS69 142 aa12.35□□□□□ -0.43
PUF60-213ENST00000528999 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
PUF60-213ENST00000528999 MYO5AQ9Y4I1 1855 aaKnown RBP12.34□□□□□ -0.43
PUF60-213ENST00000528999 A0A1B0GVL5 298 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 SYKP43405 635 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 PDE4BQ07343 736 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 SLC27A3Q5K4L6 730 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 IFIT1BQ5T764 474 aaKnown RBP12.34□□□□□ -0.43
PUF60-213ENST00000528999 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 TMC4Q7Z404 712 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 KRI1Q8N9T8 703 aaKnown RBP12.34□□□□□ -0.43
PUF60-213ENST00000528999 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 KIAA1524Q8TCG1 905 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 SRP68Q9UHB9 627 aaKnown RBP12.34□□□□□ -0.43
PUF60-213ENST00000528999 TUBE1Q9UJT0 475 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 TNKSO95271 1327 aa12.34□□□□□ -0.43
PUF60-213ENST00000528999 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 IKBKBO14920 756 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 WDHD1O75717 1129 aaPredicted RBP12.33□□□□□ -0.44
PUF60-213ENST00000528999 BBOX1O75936 387 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 BAG3O95817 575 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 PFKFB1P16118 471 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 ATP2B4P23634 1241 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 CT47A1Q5JQC4 288 aaPredicted RBP12.33□□□□□ -0.44
PUF60-213ENST00000528999 RAB11FIP4Q86YS3 637 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 DIS3L2Q8IYB7 885 aaKnown RBP12.33□□□□□ -0.44
PUF60-213ENST00000528999 ENAHQ8N8S7 591 aaPredicted RBP12.33□□□□□ -0.44
PUF60-213ENST00000528999 SDR42E1Q8WUS8 393 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 CCDC34Q96HJ3 373 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 PRIMPOLQ96LW4 560 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 DCP1AQ9NPI6 582 aaPredicted RBP12.33□□□□□ -0.44
PUF60-213ENST00000528999 FAM13BQ9NYF5 915 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 IMPACTQ9P2X3 320 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 TRPC5Q9UL62 973 aaPredicted RBP12.33□□□□□ -0.44
PUF60-213ENST00000528999 CACNA1SQ13698 1873 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 XDHP47989 1333 aa12.33□□□□□ -0.44
PUF60-213ENST00000528999 COL1A1P02452 1464 aaPredicted RBP12.33□□□□□ -0.44
PUF60-213ENST00000528999 BTAF1O14981 1849 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 LY75O60449 1722 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 USP17L12C9JPN9 530 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 USP17L21D6R901 530 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 PTPREP23469 700 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
PUF60-213ENST00000528999 FUT2Q10981 343 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 TROAPQ12815 778 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 ZNF804AQ7Z570 1209 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 DGKHQ86XP1 1220 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 DHX40Q8IX18 779 aaKnown RBP12.32□□□□□ -0.44
PUF60-213ENST00000528999 AMOTL1Q8IY63 956 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 ZNF384Q8TF68 577 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 AIFM3Q96NN9 605 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 ZNF287Q9HBT7 754 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 BRMS1Q9HCU9 246 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 TCP11L1Q9NUJ3 509 aa12.32□□□□□ -0.44
PUF60-213ENST00000528999 IQSEC3Q9UPP2 1182 aaPredicted RBP12.32□□□□□ -0.44
PUF60-213ENST00000528999 BTBD18B2RXH4 712 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 NPHP1O15259 732 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 PPFIA3O75145 1194 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 LDHBP07195 334 aaKnown RBP12.31□□□□□ -0.44
PUF60-213ENST00000528999 RXRAP19793 462 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 HOXA10P31260 410 aaPredicted RBP12.31□□□□□ -0.44
PUF60-213ENST00000528999 KIF5BP33176 963 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 TRAPPC10P48553 1259 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 GNAQP50148 359 aa12.31□□□□□ -0.44
PUF60-213ENST00000528999 GSDMDP57764 484 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms