RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 RHPN1Q8TCX5 695 aa16.36■□□□□ 0.21
CAPN1-207ENST00000527189 SH3RF3Q8TEJ3 882 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-207ENST00000527189 ARMC5Q96C12 935 aa16.36■□□□□ 0.21
CAPN1-207ENST00000527189 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.216e-6■■■■■ 54.7
CAPN1-207ENST00000527189 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
CAPN1-207ENST00000527189 COG6Q9Y2V7 657 aa16.36■□□□□ 0.21
CAPN1-207ENST00000527189 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
CAPN1-207ENST00000527189 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
CAPN1-207ENST00000527189 CAP1Q01518 475 aa16.35■□□□□ 0.21
CAPN1-207ENST00000527189 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
CAPN1-207ENST00000527189 GPAT2Q6NUI2 795 aa16.35■□□□□ 0.21
CAPN1-207ENST00000527189 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
CAPN1-207ENST00000527189 AACSQ86V21 672 aa16.35■□□□□ 0.21
CAPN1-207ENST00000527189 FOXP4Q8IVH2 680 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-207ENST00000527189 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
CAPN1-207ENST00000527189 KIF1BPQ96EK5 621 aa16.35■□□□□ 0.21
CAPN1-207ENST00000527189 PARK7Q99497 189 aaKnown RBP16.35■□□□□ 0.21
CAPN1-207ENST00000527189 CAP2P40123 477 aa16.34■□□□□ 0.21
CAPN1-207ENST00000527189 MAP3K12Q12852 859 aa16.34■□□□□ 0.21
CAPN1-207ENST00000527189 METTL16Q86W50 562 aaKnown RBP16.34■□□□□ 0.21
CAPN1-207ENST00000527189 PIH1D3Q9NQM4 214 aaKnown RBP16.34■□□□□ 0.21
CAPN1-207ENST00000527189 CYP7A1P22680 504 aa16.33■□□□□ 0.2
CAPN1-207ENST00000527189 HOXD10P28358 340 aa16.33■□□□□ 0.2
CAPN1-207ENST00000527189 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-207ENST00000527189 ADGRA1Q86SQ6 560 aa16.33■□□□□ 0.2
CAPN1-207ENST00000527189 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.33■□□□□ 0.2
CAPN1-207ENST00000527189 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
CAPN1-207ENST00000527189 GINM1Q9NU53 330 aa16.33■□□□□ 0.2
CAPN1-207ENST00000527189 ADGRA2Q96PE1 1338 aa16.33■□□□□ 0.2
CAPN1-207ENST00000527189 IDH1O75874 414 aaKnown RBP16.32■□□□□ 0.2
CAPN1-207ENST00000527189 SLURP2P0DP57 97 aa16.32■□□□□ 0.2
CAPN1-207ENST00000527189 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
CAPN1-207ENST00000527189 PROCA1Q8NCQ7 364 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-207ENST00000527189 CPA4Q9UI42 421 aa16.32■□□□□ 0.2
CAPN1-207ENST00000527189 FLT1P17948 1338 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 TRIM75PA6NK02 468 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 BCRP11274 1271 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 SLC9C1Q4G0N8 1177 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 MAPKAPK5Q8IW41 473 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 ZNF333Q96JL9 665 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 IL1RAPL2Q9NP60 686 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 AGTPBP1Q9UPW5 1226 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 PTCH2Q9Y6C5 1203 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 MAST2Q6P0Q8 1798 aa16.31■□□□□ 0.2
CAPN1-207ENST00000527189 FAM196BA6NMK8 535 aa16.3■□□□□ 0.2
CAPN1-207ENST00000527189 HLA-DOAP06340 250 aa16.3■□□□□ 0.2
CAPN1-207ENST00000527189 ASNSP08243 561 aa16.3■□□□□ 0.2
CAPN1-207ENST00000527189 IFIT2P09913 472 aaKnown RBP16.3■□□□□ 0.2
CAPN1-207ENST00000527189 PSMC4P43686 418 aa16.3■□□□□ 0.2
CAPN1-207ENST00000527189 MAGEB6Q8N7X4 407 aa16.3■□□□□ 0.2
CAPN1-207ENST00000527189 TMEM106CQ9BVX2 250 aa16.3■□□□□ 0.2
CAPN1-207ENST00000527189 ARHGAP39Q9C0H5 1083 aa16.3■□□□□ 0.2
CAPN1-207ENST00000527189 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
CAPN1-207ENST00000527189 AS3MTQ9HBK9 375 aa16.3■□□□□ 0.2
CAPN1-207ENST00000527189 CYP2C8P10632 490 aa16.29■□□□□ 0.2
CAPN1-207ENST00000527189 SPP2Q13103 211 aa16.29■□□□□ 0.2
CAPN1-207ENST00000527189 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.2
CAPN1-207ENST00000527189 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
CAPN1-207ENST00000527189 WDR18Q9BV38 432 aa16.29■□□□□ 0.2
CAPN1-207ENST00000527189 TRIM34Q9BYJ4 488 aa16.29■□□□□ 0.2
CAPN1-207ENST00000527189 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
CAPN1-207ENST00000527189 PNMA3Q9UL41 463 aa16.29■□□□□ 0.2
CAPN1-207ENST00000527189 PALD1Q9ULE6 856 aa16.29■□□□□ 0.2
CAPN1-207ENST00000527189 FMNL1O95466 1100 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-207ENST00000527189 FCGRTP55899 365 aa16.28■□□□□ 0.2
CAPN1-207ENST00000527189 DYNLL1P63167 89 aaKnown RBP16.28■□□□□ 0.2
CAPN1-207ENST00000527189 RRP1BQ14684 758 aaKnown RBP16.28■□□□□ 0.2
CAPN1-207ENST00000527189 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-207ENST00000527189 SMCR8Q8TEV9 937 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-207ENST00000527189 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
CAPN1-207ENST00000527189 PHIPQ8WWQ0 1821 aa16.28■□□□□ 0.2
CAPN1-207ENST00000527189 MYO5AQ9Y4I1 1855 aaKnown RBP16.27■□□□□ 0.2
CAPN1-207ENST00000527189 POTEFA5A3E0 1075 aa16.27■□□□□ 0.2
CAPN1-207ENST00000527189 CTGFP29279 349 aa16.27■□□□□ 0.2
CAPN1-207ENST00000527189 USP5P45974 858 aa16.27■□□□□ 0.2
CAPN1-207ENST00000527189 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.2
CAPN1-207ENST00000527189 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-207ENST00000527189 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
CAPN1-207ENST00000527189 PTPRFP10586 1907 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 C19orf81C9J6K1 198 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 APBB1O00213 710 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 OSBPP22059 807 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 GCLCP48506 637 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-207ENST00000527189 BACE1P56817 501 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 SLC9C2Q5TAH2 1124 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 CCDC84Q86UT8 332 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-207ENST00000527189 EHD4Q9H223 541 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 DNAJC18Q9H819 358 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
CAPN1-207ENST00000527189 ATP5JP18859 108 aa16.25■□□□□ 0.19
CAPN1-207ENST00000527189 HMGCS2P54868 508 aa16.25■□□□□ 0.19
CAPN1-207ENST00000527189 TREML2Q5T2D2 321 aa16.25■□□□□ 0.19
CAPN1-207ENST00000527189 C20orf194Q5TEA3 1177 aa16.25■□□□□ 0.19
CAPN1-207ENST00000527189 TATDN1Q6P1N9 297 aa16.25■□□□□ 0.19
CAPN1-207ENST00000527189 RAET1EQ8TD07 263 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms