RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 HDAC5Q9UQL6 1122 aa17.14■□□□□ 0.33
CSTF3-206ENST00000524827 COL2A1P02458 1487 aaPredicted RBP17.13■□□□□ 0.33
CSTF3-206ENST00000524827 ATAD5Q96QE3 1844 aa17.13■□□□□ 0.33
CSTF3-206ENST00000524827 SPP2Q13103 211 aa17.13■□□□□ 0.33
CSTF3-206ENST00000524827 MVPQ14764 893 aaKnown RBP17.13■□□□□ 0.33
CSTF3-206ENST00000524827 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
CSTF3-206ENST00000524827 LRCH3Q96II8 777 aa17.13■□□□□ 0.33
CSTF3-206ENST00000524827 OSBPL5Q9H0X9 879 aaPredicted RBP17.13■□□□□ 0.33
CSTF3-206ENST00000524827 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
CSTF3-206ENST00000524827 HMGCRP04035 888 aa17.12■□□□□ 0.33
CSTF3-206ENST00000524827 GCLCP48506 637 aaPredicted RBP17.12■□□□□ 0.33
CSTF3-206ENST00000524827 HMGCS2P54868 508 aa17.12■□□□□ 0.33
CSTF3-206ENST00000524827 TFCP2Q12800 502 aa17.12■□□□□ 0.33
CSTF3-206ENST00000524827 NECAB2Q7Z6G3 386 aa17.12■□□□□ 0.33
CSTF3-206ENST00000524827 ZNF280CQ8ND82 737 aa17.12■□□□□ 0.33
CSTF3-206ENST00000524827 API5Q9BZZ5 524 aaKnown RBP17.12■□□□□ 0.33
CSTF3-206ENST00000524827 AKAP2Q9Y2D5 859 aa17.12■□□□□ 0.33
CSTF3-206ENST00000524827 PABPC4Q13310 644 aaKnown RBP eCLIP17.11■□□□□ 0.33
CSTF3-206ENST00000524827 PI16Q6UXB8 463 aa17.11■□□□□ 0.33
CSTF3-206ENST00000524827 ANKLE1Q8NAG6 615 aa17.11■□□□□ 0.33
CSTF3-206ENST00000524827 SLC17A8Q8NDX2 589 aa17.11■□□□□ 0.33
CSTF3-206ENST00000524827 TBC1D2Q9BYX2 928 aa17.11■□□□□ 0.33
CSTF3-206ENST00000524827 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
CSTF3-206ENST00000524827 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
CSTF3-206ENST00000524827 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
CSTF3-206ENST00000524827 CAP2P40123 477 aa17.1■□□□□ 0.33
CSTF3-206ENST00000524827 GSTO1P78417 241 aa17.1■□□□□ 0.33
CSTF3-206ENST00000524827 TRIM32Q13049 653 aa17.1■□□□□ 0.33
CSTF3-206ENST00000524827 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
CSTF3-206ENST00000524827 TBC1D9Q6ZT07 1266 aa17.1■□□□□ 0.33
CSTF3-206ENST00000524827 C7orf61Q8IZ16 206 aa17.1■□□□□ 0.33
CSTF3-206ENST00000524827 NSUN4Q96CB9 384 aaKnown RBP17.1■□□□□ 0.33
CSTF3-206ENST00000524827 ASCC2Q9H1I8 757 aaPredicted RBP17.1■□□□□ 0.33
CSTF3-206ENST00000524827 GJD2Q9UKL4 321 aa17.1■□□□□ 0.33
CSTF3-206ENST00000524827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.1■□□□□ 0.33
CSTF3-206ENST00000524827 USP17L5A8MUK1 530 aa17.09■□□□□ 0.33
CSTF3-206ENST00000524827 LDHCP07864 332 aa17.09■□□□□ 0.33
CSTF3-206ENST00000524827 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
CSTF3-206ENST00000524827 SPATA5Q8NB90 893 aa17.09■□□□□ 0.33
CSTF3-206ENST00000524827 NEUROD6Q96NK8 337 aa17.09■□□□□ 0.33
CSTF3-206ENST00000524827 GDF15Q99988 308 aa17.09■□□□□ 0.33
CSTF3-206ENST00000524827 ZMYND8Q9ULU4 1186 aaPredicted RBP17.09■□□□□ 0.33
CSTF3-206ENST00000524827 PLXNB2O15031 1838 aa17.09■□□□□ 0.33
CSTF3-206ENST00000524827 CUL9Q8IWT3 2517 aa17.09■□□□□ 0.33
CSTF3-206ENST00000524827 DDX60LQ5H9U9 1706 aaKnown RBP17.08■□□□□ 0.32
CSTF3-206ENST00000524827 RPTORQ8N122 1335 aa17.08■□□□□ 0.32
CSTF3-206ENST00000524827 CT47B1P0C2W7 299 aaPredicted RBP17.08■□□□□ 0.32
CSTF3-206ENST00000524827 MNX1P50219 401 aaPredicted RBP17.08■□□□□ 0.32
CSTF3-206ENST00000524827 MTX1Q13505 466 aa17.08■□□□□ 0.32
CSTF3-206ENST00000524827 SH3D19Q5HYK7 790 aa17.08■□□□□ 0.32
CSTF3-206ENST00000524827 TEX11Q8IYF3 940 aa17.08■□□□□ 0.32
CSTF3-206ENST00000524827 HMX1Q9NP08 348 aaPredicted RBP17.08■□□□□ 0.32
CSTF3-206ENST00000524827 RAI14Q9P0K7 980 aa17.08■□□□□ 0.32
CSTF3-206ENST00000524827 MORF4L1Q9UBU8 362 aa17.08■□□□□ 0.32
CSTF3-206ENST00000524827 COL6A3P12111 3177 aa17.08■□□□□ 0.32
CSTF3-206ENST00000524827 SIPA1L1O43166 1804 aa17.07■□□□□ 0.32
CSTF3-206ENST00000524827 DLL1O00548 723 aa17.07■□□□□ 0.32
CSTF3-206ENST00000524827 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
CSTF3-206ENST00000524827 BMP8BP34820 402 aa17.07■□□□□ 0.32
CSTF3-206ENST00000524827 GORABQ5T7V8 394 aa17.07■□□□□ 0.32
CSTF3-206ENST00000524827 TRIB2Q92519 343 aa17.07■□□□□ 0.32
CSTF3-206ENST00000524827 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
CSTF3-206ENST00000524827 AS3MTQ9HBK9 375 aa17.07■□□□□ 0.32
CSTF3-206ENST00000524827 HERC5Q9UII4 1024 aaKnown RBP17.07■□□□□ 0.32
CSTF3-206ENST00000524827 GNAI3P08754 354 aa17.06■□□□□ 0.32
CSTF3-206ENST00000524827 IRX3P78415 501 aaPredicted RBP17.06■□□□□ 0.32
CSTF3-206ENST00000524827 MTMR2Q13614 643 aa17.06■□□□□ 0.32
CSTF3-206ENST00000524827 SH3RF3Q8TEJ3 882 aaPredicted RBP17.06■□□□□ 0.32
CSTF3-206ENST00000524827 WDR18Q9BV38 432 aa17.06■□□□□ 0.32
CSTF3-206ENST00000524827 PEX10O60683 326 aa17.05■□□□□ 0.32
CSTF3-206ENST00000524827 MCAMP43121 646 aa17.05■□□□□ 0.32
CSTF3-206ENST00000524827 MAP3K21Q5TCX8 1036 aa17.05■□□□□ 0.32
CSTF3-206ENST00000524827 C11orf49Q9H6J7 331 aa17.05■□□□□ 0.32
CSTF3-206ENST00000524827 OGDHLQ9ULD0 1010 aa17.05■□□□□ 0.32
CSTF3-206ENST00000524827 MAST2Q6P0Q8 1798 aa17.05■□□□□ 0.32
CSTF3-206ENST00000524827 PRKAR2AP13861 404 aaKnown RBP17.04■□□□□ 0.32
CSTF3-206ENST00000524827 SYN1P17600 705 aa17.04■□□□□ 0.32
CSTF3-206ENST00000524827 CYP2B6P20813 491 aa17.04■□□□□ 0.32
CSTF3-206ENST00000524827 BACE1P56817 501 aa17.04■□□□□ 0.32
CSTF3-206ENST00000524827 DNAJC18Q9H819 358 aa17.04■□□□□ 0.32
CSTF3-206ENST00000524827 TXNRD2Q9NNW7 524 aa17.04■□□□□ 0.32
CSTF3-206ENST00000524827 TMOD4Q9NZQ9 345 aa17.04■□□□□ 0.32
CSTF3-206ENST00000524827 LRP2BPQ9P2M1 347 aa17.04■□□□□ 0.32
CSTF3-206ENST00000524827 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
CSTF3-206ENST00000524827 ASNSP08243 561 aa17.03■□□□□ 0.32
CSTF3-206ENST00000524827 HOXA7P31268 230 aaPredicted RBP17.03■□□□□ 0.32
CSTF3-206ENST00000524827 MAGEA10P43363 369 aaPredicted RBP17.03■□□□□ 0.32
CSTF3-206ENST00000524827 RARSP54136 660 aaKnown RBP17.03■□□□□ 0.32
CSTF3-206ENST00000524827 HERVK_113P62684 666 aa17.03■□□□□ 0.32
CSTF3-206ENST00000524827 JAG1P78504 1218 aa17.03■□□□□ 0.32
CSTF3-206ENST00000524827 GPR153Q6NV75 609 aa17.03■□□□□ 0.32
CSTF3-206ENST00000524827 SOCS4Q8WXH5 440 aa17.03■□□□□ 0.32
CSTF3-206ENST00000524827 P2RX7Q99572 595 aaKnown RBP17.03■□□□□ 0.32
CSTF3-206ENST00000524827 NUDT12Q9BQG2 462 aa17.03■□□□□ 0.32
CSTF3-206ENST00000524827 NOL10Q9BSC4 688 aaKnown RBP17.03■□□□□ 0.32
CSTF3-206ENST00000524827 DHX36Q9H2U1 1008 aaKnown RBP17.03■□□□□ 0.32
CSTF3-206ENST00000524827 A0A0C4DFX4 3053 aa17.02■□□□□ 0.32
CSTF3-206ENST00000524827 PFASO15067 1338 aa17.02■□□□□ 0.32
CSTF3-206ENST00000524827 CDK5RAP2Q96SN8 1893 aa17.02■□□□□ 0.32
CSTF3-206ENST00000524827 UQCRFS1P1P0C7P4 283 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms