RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 MSMPQ1L6U9 139 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 ZNF394Q53GI3 561 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 MAP1SQ66K74 1059 aaPredicted RBP6.22□□□□□ -1.41
PCM1-220ENST00000523896 SCARA3Q6AZY7 606 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 ZNF765Q7L2R6 523 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 STK35Q8TDR2 534 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 RHOVQ96L33 236 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 FANCD2OSQ96PS1 177 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 CYP8B1Q9UNU6 501 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 PCDHGB7Q9Y5F8 929 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 COL17A1Q9UMD9 1497 aaPredicted RBP6.22□□□□□ -1.41
PCM1-220ENST00000523896 ZNF862O60290 1169 aa6.21□□□□□ -1.42
PCM1-220ENST00000523896 GBP2P32456 591 aaPredicted RBP6.21□□□□□ -1.42
PCM1-220ENST00000523896 RACK1P63244 317 aaKnown RBP6.21□□□□□ -1.42
PCM1-220ENST00000523896 RASIP1Q5U651 963 aa6.21□□□□□ -1.42
PCM1-220ENST00000523896 OGFOD3Q6PK18 319 aa6.21□□□□□ -1.42
PCM1-220ENST00000523896 ZNF654Q8IZM8 581 aa6.21□□□□□ -1.42
PCM1-220ENST00000523896 AGBL5Q8NDL9 886 aa6.21□□□□□ -1.42
PCM1-220ENST00000523896 FLCNQ8NFG4 579 aa6.21□□□□□ -1.42
PCM1-220ENST00000523896 WDR89Q96FK6 387 aaPredicted RBP6.21□□□□□ -1.42
PCM1-220ENST00000523896 CCSER2Q9H7U1 834 aa6.21□□□□□ -1.42
PCM1-220ENST00000523896 KCNQ5Q9NR82 932 aa6.21□□□□□ -1.42
PCM1-220ENST00000523896 PCOLCE2Q9UKZ9 415 aa6.21□□□□□ -1.42
PCM1-220ENST00000523896 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.21□□□□□ -1.42
PCM1-220ENST00000523896 PRNPP04156 253 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 HCLS1P14317 486 aaPredicted RBP6.2□□□□□ -1.42
PCM1-220ENST00000523896 TAL1P17542 331 aaPredicted RBP6.2□□□□□ -1.42
PCM1-220ENST00000523896 TFE3P19532 575 aaPredicted RBP6.2□□□□□ -1.42
PCM1-220ENST00000523896 LMNB2Q03252 620 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 TTLL4Q14679 1199 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 LLGL2Q6P1M3 1020 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 SHISA5Q8N114 240 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 GATA6Q92908 595 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 C8orf37Q96NL8 207 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 CACNA2D2Q9NY47 1150 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 CCDC39Q9UFE4 941 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 TLR6Q9Y2C9 796 aa6.2□□□□□ -1.42
PCM1-220ENST00000523896 MINDY4BA8MYZ0 360 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 F6X3S4 739 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 TRIM37O94972 964 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 PF4P02776 101 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 FAM87AP0C7U9 286 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 GARTP22102 1010 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 ZC3H6P61129 1189 aaKnown RBP6.19□□□□□ -1.42
PCM1-220ENST00000523896 CAMK2GQ13555 558 aaPredicted RBP6.19□□□□□ -1.42
PCM1-220ENST00000523896 CCDC84Q86UT8 332 aaPredicted RBP6.19□□□□□ -1.42
PCM1-220ENST00000523896 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.19□□□□□ -1.42
PCM1-220ENST00000523896 STK11IPQ8N1F8 1099 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 GRIN3AQ8TCU5 1115 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 GAL3ST3Q96A11 431 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 C1GALT1Q9NS00 363 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 ADAMTS1Q9UHI8 967 aa6.19□□□□□ -1.42
PCM1-220ENST00000523896 DYNC1LI2O43237 492 aaPredicted RBP6.18□□□□□ -1.42
PCM1-220ENST00000523896 ADAMTS4O75173 837 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 LMNB1P20700 586 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 EIF4A3P38919 411 aaKnown RBP6.18□□□□□ -1.42
PCM1-220ENST00000523896 TXKP42681 527 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 ERVK-24P63145 666 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 CDK5R2Q13319 367 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 SEZ6L2Q6UXD5 910 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 GPBAR1Q8TDU6 330 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 MIR1-1HGQ9H1L0 117 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 ACBD3Q9H3P7 528 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 DISC1Q9NRI5 854 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 ZC3H7BQ9UGR2 993 aaKnown RBP6.18□□□□□ -1.42
PCM1-220ENST00000523896 SLC5A6Q9Y289 635 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 PCDHB5Q9Y5E4 795 aa6.18□□□□□ -1.42
PCM1-220ENST00000523896 SNAP47Q5SQN1 464 aa6.17□□□□□ -1.42
PCM1-220ENST00000523896 FBXL19Q6PCT2 694 aa6.17□□□□□ -1.42
PCM1-220ENST00000523896 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
PCM1-220ENST00000523896 KIAA0825Q8IV33 1275 aa6.17□□□□□ -1.42
PCM1-220ENST00000523896 ABI1Q8IZP0 508 aa6.17□□□□□ -1.42
PCM1-220ENST00000523896 RNF214Q8ND24 703 aa6.17□□□□□ -1.42
PCM1-220ENST00000523896 ZNF296Q8WUU4 475 aaPredicted RBP6.17□□□□□ -1.42
PCM1-220ENST00000523896 MISP3Q96FF7 219 aa6.17□□□□□ -1.42
PCM1-220ENST00000523896 TINF2Q9BSI4 451 aa6.17□□□□□ -1.42
PCM1-220ENST00000523896 SPON2Q9BUD6 331 aa6.17□□□□□ -1.42
PCM1-220ENST00000523896 SUPT16HQ9Y5B9 1047 aaKnown RBP6.17□□□□□ -1.42
PCM1-220ENST00000523896 GREM1O60565 184 aa6.16□□□□□ -1.42
PCM1-220ENST00000523896 GJA8P48165 433 aa6.16□□□□□ -1.42
PCM1-220ENST00000523896 FAM160A1Q05DH4 1040 aa6.16□□□□□ -1.42
PCM1-220ENST00000523896 SEPT6Q14141 434 aa6.16□□□□□ -1.42
PCM1-220ENST00000523896 ZC3H12AQ5D1E8 599 aaKnown RBP6.16□□□□□ -1.42
PCM1-220ENST00000523896 GOLM1Q8NBJ4 401 aa6.16□□□□□ -1.42
PCM1-220ENST00000523896 NETO1Q8TDF5 533 aa6.16□□□□□ -1.42
PCM1-220ENST00000523896 ELMO3Q96BJ8 720 aa6.16□□□□□ -1.42
PCM1-220ENST00000523896 RNF114Q9Y508 228 aa6.16□□□□□ -1.42
PCM1-220ENST00000523896 PCDHGC5Q9Y5F6 944 aa6.16□□□□□ -1.42
PCM1-220ENST00000523896 PAK2Q13177 524 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 PLCL1Q15111 1095 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 NAALADL2Q58DX5 795 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 MPRIPQ6WCQ1 1025 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 BNC2Q6ZN30 1099 aaPredicted RBP6.15□□□□□ -1.42
PCM1-220ENST00000523896 FAM196AQ6ZSG2 479 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 KCT2Q8NC54 265 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 RASGRP4Q8TDF6 673 aa6.15□□□□□ -1.42
PCM1-220ENST00000523896 GATAD2BQ8WXI9 593 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms