RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 BRCA2P51587 3418 aa22.21■■□□□ 1.15
TFF3-204ENST00000518498 RFX7Q2KHR2 1363 aa22.21■■□□□ 1.15
TFF3-204ENST00000518498 TRIM75PA6NK02 468 aa22.2■■□□□ 1.14
TFF3-204ENST00000518498 RHBDL3P58872 404 aa22.2■■□□□ 1.14
TFF3-204ENST00000518498 GSTO1P78417 241 aa22.2■■□□□ 1.14
TFF3-204ENST00000518498 MTX1Q13505 466 aa22.2■■□□□ 1.14
TFF3-204ENST00000518498 GORABQ5T7V8 394 aa22.2■■□□□ 1.14
TFF3-204ENST00000518498 CEP85Q6P2H3 762 aa22.2■■□□□ 1.14
TFF3-204ENST00000518498 SMCR8Q8TEV9 937 aaPredicted RBP22.2■■□□□ 1.14
TFF3-204ENST00000518498 HTATIP2Q9BUP3 242 aa22.2■■□□□ 1.14
TFF3-204ENST00000518498 DOCK2Q92608 1830 aa22.2■■□□□ 1.14
TFF3-204ENST00000518498 ADCY3O60266 1144 aa22.19■■□□□ 1.14
TFF3-204ENST00000518498 NPM3O75607 178 aaKnown RBP22.19■■□□□ 1.14
TFF3-204ENST00000518498 MAP4K4O95819 1239 aaPredicted RBP22.19■■□□□ 1.14
TFF3-204ENST00000518498 FLT3LGP49771 235 aa22.19■■□□□ 1.14
TFF3-204ENST00000518498 ATP8B2P98198 1209 aa22.19■■□□□ 1.14
TFF3-204ENST00000518498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.19■■□□□ 1.14
TFF3-204ENST00000518498 HMG20BQ9P0W2 317 aa22.19■■□□□ 1.14
TFF3-204ENST00000518498 TNPO2O14787 897 aaKnown RBP22.18■■□□□ 1.14
TFF3-204ENST00000518498 B4GALNT3Q6L9W6 998 aa22.18■■□□□ 1.14
TFF3-204ENST00000518498 SPATA5Q8NB90 893 aa22.18■■□□□ 1.14
TFF3-204ENST00000518498 U2AF1L4Q8WU68 220 aaKnown RBP22.18■■□□□ 1.14
TFF3-204ENST00000518498 UNC93B1Q9H1C4 597 aa22.18■■□□□ 1.14
TFF3-204ENST00000518498 AGTPBP1Q9UPW5 1226 aa22.18■■□□□ 1.14
TFF3-204ENST00000518498 SGPL1O95470 568 aa22.17■■□□□ 1.14
TFF3-204ENST00000518498 TBC1D9Q6ZT07 1266 aa22.17■■□□□ 1.14
TFF3-204ENST00000518498 CENPQQ7L2Z9 268 aaPredicted RBP22.17■■□□□ 1.14
TFF3-204ENST00000518498 UBE2Q1Q7Z7E8 422 aa22.17■■□□□ 1.14
TFF3-204ENST00000518498 PXYLP1Q8TE99 480 aa22.17■■□□□ 1.14
TFF3-204ENST00000518498 ZNF384Q8TF68 577 aa22.17■■□□□ 1.14
TFF3-204ENST00000518498 NSUN4Q96CB9 384 aaKnown RBP22.17■■□□□ 1.14
TFF3-204ENST00000518498 OSBPL5Q9H0X9 879 aaPredicted RBP22.17■■□□□ 1.14
TFF3-204ENST00000518498 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.17■■□□□ 1.14
TFF3-204ENST00000518498 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.17■■□□□ 1.14
TFF3-204ENST00000518498 G3BP1Q13283 466 aaKnown RBP eCLIP22.16■■□□□ 1.14
TFF3-204ENST00000518498 IRF5Q13568 498 aa22.16■■□□□ 1.14
TFF3-204ENST00000518498 CHRDL2Q6WN34 429 aa22.16■■□□□ 1.14
TFF3-204ENST00000518498 CCDC84Q86UT8 332 aaPredicted RBP22.16■■□□□ 1.14
TFF3-204ENST00000518498 ANKRD13CQ8N6S4 541 aa22.16■■□□□ 1.14
TFF3-204ENST00000518498 RAI14Q9P0K7 980 aa22.16■■□□□ 1.14
TFF3-204ENST00000518498 PNMA3Q9UL41 463 aa22.16■■□□□ 1.14
TFF3-204ENST00000518498 MGAMO43451 1857 aa22.15■■□□□ 1.14
TFF3-204ENST00000518498 ELNP15502 786 aa22.15■■□□□ 1.14
TFF3-204ENST00000518498 CAPN2P17655 700 aa22.15■■□□□ 1.14
TFF3-204ENST00000518498 SPP2Q13103 211 aa22.15■■□□□ 1.14
TFF3-204ENST00000518498 COA7Q96BR5 231 aa22.15■■□□□ 1.14
TFF3-204ENST00000518498 FAM196BA6NMK8 535 aa22.14■■□□□ 1.13
TFF3-204ENST00000518498 TFRCP02786 760 aaKnown RBP22.14■■□□□ 1.13
TFF3-204ENST00000518498 TREML2Q5T2D2 321 aa22.14■■□□□ 1.13
TFF3-204ENST00000518498 PI16Q6UXB8 463 aa22.14■■□□□ 1.13
TFF3-204ENST00000518498 PROCA1Q8NCQ7 364 aaPredicted RBP22.14■■□□□ 1.13
TFF3-204ENST00000518498 SSH3Q8TE77 659 aa22.14■■□□□ 1.13
TFF3-204ENST00000518498 TBC1D2Q9BYX2 928 aa22.14■■□□□ 1.13
TFF3-204ENST00000518498 NR2E3Q9Y5X4 410 aa22.14■■□□□ 1.13
TFF3-204ENST00000518498 DOCK1Q14185 1865 aa22.13■■□□□ 1.13
TFF3-204ENST00000518498 FARP2O94887 1054 aaPredicted RBP22.13■■□□□ 1.13
TFF3-204ENST00000518498 INHAP05111 366 aa22.13■■□□□ 1.13
TFF3-204ENST00000518498 UQCRFS1P1P0C7P4 283 aa22.13■■□□□ 1.13
TFF3-204ENST00000518498 ARID4AP29374 1257 aaPredicted RBP22.13■■□□□ 1.13
TFF3-204ENST00000518498 SIRT2Q8IXJ6 389 aa22.13■■□□□ 1.13
TFF3-204ENST00000518498 ZNF280CQ8ND82 737 aa22.13■■□□□ 1.13
TFF3-204ENST00000518498 LRP2BPQ9P2M1 347 aa22.13■■□□□ 1.13
TFF3-204ENST00000518498 TAOK2Q9UL54 1235 aa22.13■■□□□ 1.13
TFF3-204ENST00000518498 CAP2P40123 477 aa22.12■■□□□ 1.13
TFF3-204ENST00000518498 PABPC4Q13310 644 aaKnown RBP eCLIP22.12■■□□□ 1.13
TFF3-204ENST00000518498 NOL10Q9BSC4 688 aaKnown RBP22.12■■□□□ 1.13
TFF3-204ENST00000518498 RBM27Q9P2N5 1060 aaKnown RBP22.12■■□□□ 1.13
TFF3-204ENST00000518498 PHIPQ8WWQ0 1821 aa22.12■■□□□ 1.13
TFF3-204ENST00000518498 USP17L5A8MUK1 530 aa22.11■■□□□ 1.13
TFF3-204ENST00000518498 IGHDP01880 384 aa22.11■■□□□ 1.13
TFF3-204ENST00000518498 GCLCP48506 637 aaPredicted RBP22.11■■□□□ 1.13
TFF3-204ENST00000518498 POLA2Q14181 598 aa22.11■■□□□ 1.13
TFF3-204ENST00000518498 FAM110CQ1W6H9 321 aa22.11■■□□□ 1.13
TFF3-204ENST00000518498 TEX11Q8IYF3 940 aa22.11■■□□□ 1.13
TFF3-204ENST00000518498 DEFB118Q96PH6 123 aa22.11■■□□□ 1.13
TFF3-204ENST00000518498 PNMA6EA0A0J9YXQ4 647 aa22.1■■□□□ 1.13
TFF3-204ENST00000518498 MCAMP43121 646 aa22.1■■□□□ 1.13
TFF3-204ENST00000518498 AS3MTQ9HBK9 375 aa22.1■■□□□ 1.13
TFF3-204ENST00000518498 PI4KBQ9UBF8 816 aa22.1■■□□□ 1.13
TFF3-204ENST00000518498 HERC5Q9UII4 1024 aaKnown RBP22.1■■□□□ 1.13
TFF3-204ENST00000518498 COL2A1P02458 1487 aaPredicted RBP22.09■■□□□ 1.13
TFF3-204ENST00000518498 BAG3O95817 575 aa22.09■■□□□ 1.13
TFF3-204ENST00000518498 HMGCS2P54868 508 aa22.09■■□□□ 1.13
TFF3-204ENST00000518498 RRP1BQ14684 758 aaKnown RBP22.09■■□□□ 1.13
TFF3-204ENST00000518498 HSP90AB4PQ58FF6 505 aa22.09■■□□□ 1.13
TFF3-204ENST00000518498 SH3RF3Q8TEJ3 882 aaPredicted RBP22.09■■□□□ 1.13
TFF3-204ENST00000518498 DHX36Q9H2U1 1008 aaKnown RBP22.09■■□□□ 1.13
TFF3-204ENST00000518498 DCTPP1Q9H773 170 aa22.09■■□□□ 1.13
TFF3-204ENST00000518498 PTPRFP10586 1907 aa22.09■■□□□ 1.13
TFF3-204ENST00000518498 SH3D19Q5HYK7 790 aa22.08■■□□□ 1.13
TFF3-204ENST00000518498 SMC5Q8IY18 1101 aa22.08■■□□□ 1.13
TFF3-204ENST00000518498 PAK6Q9NQU5 681 aaPredicted RBP22.08■■□□□ 1.13
TFF3-204ENST00000518498 EVI5O60447 810 aa22.07■■□□□ 1.12
TFF3-204ENST00000518498 CCDC158Q5M9N0 1113 aa22.07■■□□□ 1.12
TFF3-204ENST00000518498 TTC39AQ5SRH9 613 aa22.07■■□□□ 1.12
TFF3-204ENST00000518498 NAA16Q6N069 864 aaPredicted RBP22.07■■□□□ 1.12
TFF3-204ENST00000518498 CRISPLD2Q9H0B8 497 aa22.07■■□□□ 1.12
TFF3-204ENST00000518498 ASCC2Q9H1I8 757 aaPredicted RBP22.07■■□□□ 1.12
TFF3-204ENST00000518498 SNRKQ9NRH2 765 aa22.07■■□□□ 1.12
TFF3-204ENST00000518498 AATFQ9NY61 560 aaKnown RBP eCLIP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms