RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 KIF23Q02241 960 aaPredicted RBP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 NTRK3Q16288 839 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 MAP3K11Q16584 847 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 UVSSAQ2YD98 709 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 HS1BP3Q53T59 392 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 TMEM67Q5HYA8 995 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 PRR5LQ6MZQ0 368 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 MFSD6Q6ZSS7 791 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 BRAPQ7Z569 592 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 MICU3Q86XE3 530 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 RAB11FIP4Q86YS3 637 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 CCDC24Q8N4L8 307 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 RNF214Q8ND24 703 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 FBXO18Q8NFZ0 1043 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 NSUN4Q96CB9 384 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 KCTD12Q96CX2 325 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 PGBD1Q96JS3 809 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 USP28Q96RU2 1077 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 FTOQ9C0B1 505 aaKnown RBP eCLIP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 NUP62CLQ9H1M0 184 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 SENP2Q9HC62 589 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 RRAGDQ9NQL2 400 aaPredicted RBP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 FAM217BQ9NTX9 383 aaPredicted RBP5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 RTEL1Q9NZ71 1219 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 ABCF2Q9UG63 623 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 RCOR1Q9UKL0 485 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 CFAP45Q9UL16 551 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 STK24Q9Y6E0 443 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 LRRC37AA6NMS7 1700 aa5.56□□□□□ -1.52
PDLIM5-214ENST00000510099 KIAA1551Q9HCM1 1747 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 GOLGA6L4A6NEF3 574 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 ESPNB1AK53 854 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 KIF28PB7ZC32 967 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 ARHGAP33O14559 1287 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 IFIT3O14879 490 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 PPFIA3O75145 1194 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 YEATS4O95619 227 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 CCDC192P0DO97 292 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 IFNAR1P17181 557 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 CDC27P30260 824 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 DYNLL1P63167 89 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 ST5P78524 1137 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 GUCY1B3Q02153 619 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 MECOMQ03112 1051 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 DDR1Q08345 913 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 SART3Q15020 963 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 MYSM1Q5VVJ2 828 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 OTUD7BQ6GQQ9 843 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 CPLX2Q6PUV4 134 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 NFXL1Q6ZNB6 911 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 KRT27Q7Z3Y8 459 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 SLC51AQ86UW1 340 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 FBXO22Q8NEZ5 403 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 BICD2Q8TD16 824 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 SDR42E1Q8WUS8 393 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 TRIM44Q96DX7 344 aaPredicted RBP5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 ALG1Q9BT22 464 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 QTRT2Q9H974 415 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 RTN4Q9NQC3 1192 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 POLR3EQ9NVU0 708 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 DACT1Q9NYF0 836 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 TFCP2L1Q9NZI6 479 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 TFIP11Q9UBB9 837 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 LEMD3Q9Y2U8 911 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 SLC12A7Q9Y666 1083 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 ROBO3Q96MS0 1386 aa5.55□□□□□ -1.52
PDLIM5-214ENST00000510099 TCHHQ07283 1943 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 MYH15Q9Y2K3 1946 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 LTBP1Q14766 1721 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 TAF1P21675 1872 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 A0A1W2PQ27 194 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 A0A1W2PQ64 194 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 A0A1W2PQD8 194 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 KLRG2A4D1S0 409 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 CCDC69A6NI79 296 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 POLRMTO00411 1230 aaKnown RBP5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 KIF3CO14782 793 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 NPHP1O15259 732 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 ORC4O43929 436 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 NR1I2O75469 434 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 FMNL1O95466 1100 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 RXRAP19793 462 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 HMGB2P26583 209 aaKnown RBP5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 PRDX5P30044 214 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 HOXA10P31260 410 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 CLCN1P35523 988 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 PSEN2P49810 448 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 NT5C2P49902 561 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 FAM160A1Q05DH4 1040 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 TYRO3Q06418 890 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 CHAF1AQ13111 956 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 WTAPQ15007 396 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 SEC23AQ15436 765 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 RTN1Q16799 776 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 SPTY2D1Q68D10 685 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 KRT40Q6A162 431 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 CTR9Q6PD62 1173 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 CCDC73Q6ZRK6 1079 aa5.54□□□□□ -1.52
PDLIM5-214ENST00000510099 ZNF804AQ7Z570 1209 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 673.8 ms