RNA–Protein interactions for RNA: ENST00000509415.5

CALCOCO2-214, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-214ENST00000509415 RAI14Q9P0K7 980 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 SLC45A1Q9Y2W3 748 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 MYPNQ86TC9 1320 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 TRIOBPQ9H2D6 2365 aa13.06□□□□□ -0.32
CALCOCO2-214ENST00000509415 FCGRTP55899 365 aa13.06□□□□□ -0.32
CALCOCO2-214ENST00000509415 GPR108Q9NPR9 543 aa13.06□□□□□ -0.32
CALCOCO2-214ENST00000509415 TRIM75PA6NK02 468 aa13.05□□□□□ -0.32
CALCOCO2-214ENST00000509415 GRK4P32298 578 aa13.05□□□□□ -0.32
CALCOCO2-214ENST00000509415 POLA2Q14181 598 aa13.05□□□□□ -0.32
CALCOCO2-214ENST00000509415 SSH3Q8TE77 659 aa13.05□□□□□ -0.32
CALCOCO2-214ENST00000509415 OSBPL5Q9H0X9 879 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO2-214ENST00000509415 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.05□□□□□ -0.32
CALCOCO2-214ENST00000509415 LRP2BPQ9P2M1 347 aa13.05□□□□□ -0.32
CALCOCO2-214ENST00000509415 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO2-214ENST00000509415 SZT2Q5T011 3432 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 FAM196BA6NMK8 535 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 PRKCZQ05513 592 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 MTFR1Q15390 333 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 TNNI3KQ59H18 835 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 TTC39AQ5SRH9 613 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 TEX11Q8IYF3 940 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 NOL10Q9BSC4 688 aaKnown RBP13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 AGTPBP1Q9UPW5 1226 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 FPGT-TNNI3KV9GXZ4 949 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 PLXNB2O15031 1838 aa13.04□□□□□ -0.32
CALCOCO2-214ENST00000509415 DEKP35659 375 aaKnown RBP13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 OS9Q13438 667 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 HABP4Q5JVS0 413 aaKnown RBP13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 CCDC158Q5M9N0 1113 aa13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 CCDC84Q86UT8 332 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 PROCA1Q8NCQ7 364 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 SMCR8Q8TEV9 937 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 DBNDD2Q9BQY9 259 aa13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 SNRKQ9NRH2 765 aa13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 HERC5Q9UII4 1024 aaKnown RBP13.03□□□□□ -0.32
CALCOCO2-214ENST00000509415 MYH8P13535 1937 aa13.02□□□□□ -0.32
CALCOCO2-214ENST00000509415 IGSF3O75054 1194 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 BAG3O95817 575 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 CCL5P13501 91 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 PLCG2P16885 1265 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 CAP2P40123 477 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 UBXN2AP68543 259 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 TREML2Q5T2D2 321 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 NAA16Q6N069 864 aaPredicted RBP13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 ZNF280CQ8ND82 737 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 SHISA4Q96DD7 197 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 DHX36Q9H2U1 1008 aaKnown RBP13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 AATFQ9NY61 560 aaKnown RBP eCLIP13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 PI4KBQ9UBF8 816 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 BIN2Q9UBW5 565 aaPredicted RBP13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 PNMA3Q9UL41 463 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 GABRQQ9UN88 632 aa13.02□□□□□ -0.33
CALCOCO2-214ENST00000509415 ALPK3Q96L96 1907 aa13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 CYP2E1P05181 493 aaPredicted RBP13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 GJB1P08034 283 aa13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 GJA8P48165 433 aa13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 PPP4CP60510 307 aa13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 SPP2Q13103 211 aa13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 ITPRIPQ8IWB1 547 aa13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 ZNF512BQ96KM6 892 aaPredicted RBP13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 RNF208Q9H0X6 261 aa13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 NOP58Q9Y2X3 529 aaKnown RBP13.01□□□□□ -0.33
CALCOCO2-214ENST00000509415 NAV1Q8NEY1 1877 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 USP17L5A8MUK1 530 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 TNPO2O14787 897 aaKnown RBP13□□□□□ -0.33
CALCOCO2-214ENST00000509415 ZBTB7BO15156 539 aaPredicted RBP13□□□□□ -0.33
CALCOCO2-214ENST00000509415 ADCY3O60266 1144 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 RLBP1P12271 317 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 FLT3LGP49771 235 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 HMGCS2P54868 508 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 PABPC4Q13310 644 aaKnown RBP eCLIP13□□□□□ -0.33
CALCOCO2-214ENST00000509415 RRP1BQ14684 758 aaKnown RBP13□□□□□ -0.33
CALCOCO2-214ENST00000509415 FAM110CQ1W6H9 321 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 AS3MTQ9HBK9 375 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 MYH7P12883 1935 aa13□□□□□ -0.33
CALCOCO2-214ENST00000509415 DNAH12Q6ZR08 3092 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 FLT1P17948 1338 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 ZAP70P43403 619 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 GCLCP48506 637 aaPredicted RBP12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 IRF5Q13568 498 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 SH3D19Q5HYK7 790 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 ADGRA1Q86SQ6 560 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 METTL16Q86W50 562 aaKnown RBP12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 MAPKAPK5Q8IW41 473 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 PXYLP1Q8TE99 480 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 TGFBRAP1Q8WUH2 860 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 COA7Q96BR5 231 aa12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 DBNLQ9UJU6 430 aaKnown RBP12.99□□□□□ -0.33
CALCOCO2-214ENST00000509415 ASNSP08243 561 aa12.98□□□□□ -0.33
CALCOCO2-214ENST00000509415 ELNP15502 786 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms