RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 FCGRTP55899 365 aa24.42■■□□□ 1.5
UBE2D3-220ENST00000505307 TMED8Q6PL24 325 aaPredicted RBP24.42■■□□□ 1.5
UBE2D3-220ENST00000505307 AATFQ9NY61 560 aaKnown RBP eCLIP24.42■■□□□ 1.56e-12■■□□□ 12.2
UBE2D3-220ENST00000505307 CENPFP49454 3210 aa24.42■■□□□ 1.5
UBE2D3-220ENST00000505307 SLURP2P0DP57 97 aa24.41■■□□□ 1.5
UBE2D3-220ENST00000505307 OSBPP22059 807 aa24.41■■□□□ 1.5
UBE2D3-220ENST00000505307 CAP2P40123 477 aa24.41■■□□□ 1.5
UBE2D3-220ENST00000505307 ZAP70P43403 619 aa24.41■■□□□ 1.5
UBE2D3-220ENST00000505307 HSP90AB4PQ58FF6 505 aa24.41■■□□□ 1.5
UBE2D3-220ENST00000505307 CERS3Q8IU89 383 aa24.41■■□□□ 1.5
UBE2D3-220ENST00000505307 PROCA1Q8NCQ7 364 aaPredicted RBP24.41■■□□□ 1.5
UBE2D3-220ENST00000505307 RAET1EQ8TD07 263 aa24.41■■□□□ 1.5
UBE2D3-220ENST00000505307 AGTPBP1Q9UPW5 1226 aa24.41■■□□□ 1.5
UBE2D3-220ENST00000505307 CTGFP29279 349 aa24.4■■□□□ 1.5
UBE2D3-220ENST00000505307 ZNF280CQ8ND82 737 aa24.4■■□□□ 1.5
UBE2D3-220ENST00000505307 SMCR8Q8TEV9 937 aaPredicted RBP24.4■■□□□ 1.5
UBE2D3-220ENST00000505307 SH3TC2Q8TF17 1288 aa24.4■■□□□ 1.5
UBE2D3-220ENST00000505307 EAF2Q96CJ1 260 aaPredicted RBP24.4■■□□□ 1.5
UBE2D3-220ENST00000505307 CCDC8Q9H0W5 538 aaPredicted RBP24.4■■□□□ 1.5
UBE2D3-220ENST00000505307 PNMA3Q9UL41 463 aa24.4■■□□□ 1.5
UBE2D3-220ENST00000505307 MYPNQ86TC9 1320 aa24.39■■□□□ 1.5
UBE2D3-220ENST00000505307 FAM196BA6NMK8 535 aa24.39■■□□□ 1.49
UBE2D3-220ENST00000505307 FOXP4Q8IVH2 680 aaPredicted RBP24.39■■□□□ 1.49
UBE2D3-220ENST00000505307 MAST2Q6P0Q8 1798 aa24.39■■□□□ 1.49
UBE2D3-220ENST00000505307 USP17L5A8MUK1 530 aa24.38■■□□□ 1.49
UBE2D3-220ENST00000505307 MYCP01106 439 aaPredicted RBP24.38■■□□□ 1.49
UBE2D3-220ENST00000505307 GRK4P32298 578 aa24.38■■□□□ 1.49
UBE2D3-220ENST00000505307 PABPC4Q13310 644 aaKnown RBP eCLIP24.38■■□□□ 1.494e-7■■■■□ 24.1
UBE2D3-220ENST00000505307 PANK1Q8TE04 598 aa24.38■■□□□ 1.49
UBE2D3-220ENST00000505307 TGFBRAP1Q8WUH2 860 aa24.38■■□□□ 1.49
UBE2D3-220ENST00000505307 AS3MTQ9HBK9 375 aa24.38■■□□□ 1.49
UBE2D3-220ENST00000505307 GINM1Q9NU53 330 aa24.38■■□□□ 1.49
UBE2D3-220ENST00000505307 SPP2Q13103 211 aa24.37■■□□□ 1.49
UBE2D3-220ENST00000505307 METTL16Q86W50 562 aaKnown RBP24.37■■□□□ 1.49
UBE2D3-220ENST00000505307 GCC1Q96CN9 775 aa24.37■■□□□ 1.49
UBE2D3-220ENST00000505307 PIH1D3Q9NQM4 214 aaKnown RBP24.37■■□□□ 1.49
UBE2D3-220ENST00000505307 TLR7Q9NYK1 1049 aaKnown RBP24.37■■□□□ 1.49
UBE2D3-220ENST00000505307 ZSWIM8A7E2V4 1837 aa24.37■■□□□ 1.49
UBE2D3-220ENST00000505307 PHIPQ8WWQ0 1821 aa24.37■■□□□ 1.49
UBE2D3-220ENST00000505307 FLT1P17948 1338 aa24.36■■□□□ 1.49
UBE2D3-220ENST00000505307 PTPRFP10586 1907 aa24.36■■□□□ 1.49
UBE2D3-220ENST00000505307 ASNSP08243 561 aa24.36■■□□□ 1.49
UBE2D3-220ENST00000505307 ADGRA1Q86SQ6 560 aa24.36■■□□□ 1.49
UBE2D3-220ENST00000505307 CCDC84Q86UT8 332 aaPredicted RBP24.36■■□□□ 1.49
UBE2D3-220ENST00000505307 MAPKAPK5Q8IW41 473 aa24.36■■□□□ 1.49
UBE2D3-220ENST00000505307 TRIM34Q9BYJ4 488 aa24.36■■□□□ 1.49
UBE2D3-220ENST00000505307 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.36■■□□□ 1.49
UBE2D3-220ENST00000505307 IDH1O75874 414 aaKnown RBP24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 CYP7A1P22680 504 aa24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 SH3D19Q5HYK7 790 aa24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 AACSQ86V21 672 aa24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 RPAP2Q8IXW5 612 aaPredicted RBP24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 CRACR2BQ8N4Y2 399 aaPredicted RBP24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 NKX2-3Q8TAU0 364 aa24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 WDR18Q9BV38 432 aa24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 CHMP4BQ9H444 224 aaKnown RBP24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 EXOC6BQ9Y2D4 811 aa24.35■■□□□ 1.49
UBE2D3-220ENST00000505307 HLA-DOAP06340 250 aa24.34■■□□□ 1.49
UBE2D3-220ENST00000505307 GCLCP48506 637 aaPredicted RBP24.34■■□□□ 1.49
UBE2D3-220ENST00000505307 UBXN2AP68543 259 aa24.34■■□□□ 1.49
UBE2D3-220ENST00000505307 PRKCZQ05513 592 aa24.34■■□□□ 1.49
UBE2D3-220ENST00000505307 MAP3K12Q12852 859 aa24.34■■□□□ 1.49
UBE2D3-220ENST00000505307 SLAIN1Q8ND83 568 aa24.34■■□□□ 1.49
UBE2D3-220ENST00000505307 DDX19BQ9UMR2 479 aa24.34■■□□□ 1.49
UBE2D3-220ENST00000505307 BRCA2P51587 3418 aa24.34■■□□□ 1.49
UBE2D3-220ENST00000505307 HMMRO75330 724 aa24.33■■□□□ 1.49
UBE2D3-220ENST00000505307 RRP1BQ14684 758 aaKnown RBP24.33■■□□□ 1.49
UBE2D3-220ENST00000505307 FAM110CQ1W6H9 321 aa24.33■■□□□ 1.49
UBE2D3-220ENST00000505307 TREML2Q5T2D2 321 aa24.33■■□□□ 1.49
UBE2D3-220ENST00000505307 MKI67P46013 3256 aaKnown RBP24.33■■□□□ 1.49
UBE2D3-220ENST00000505307 TNPO2O14787 897 aaKnown RBP24.32■■□□□ 1.48
UBE2D3-220ENST00000505307 HMGCS2P54868 508 aa24.32■■□□□ 1.48
UBE2D3-220ENST00000505307 RHPN1Q8TCX5 695 aa24.32■■□□□ 1.48
UBE2D3-220ENST00000505307 BIN2Q9UBW5 565 aaPredicted RBP24.32■■□□□ 1.48
UBE2D3-220ENST00000505307 PALD1Q9ULE6 856 aa24.32■■□□□ 1.48
UBE2D3-220ENST00000505307 IRF5Q13568 498 aa24.31■■□□□ 1.48
UBE2D3-220ENST00000505307 TTF1Q15361 905 aaPredicted RBP24.31■■□□□ 1.48
UBE2D3-220ENST00000505307 CLASRPQ8N2M8 674 aaKnown RBP24.31■■□□□ 1.48
UBE2D3-220ENST00000505307 MAGEB6Q8N7X4 407 aa24.31■■□□□ 1.48
UBE2D3-220ENST00000505307 PXYLP1Q8TE99 480 aa24.31■■□□□ 1.48
UBE2D3-220ENST00000505307 COA7Q96BR5 231 aa24.31■■□□□ 1.48
UBE2D3-220ENST00000505307 KIF1BPQ96EK5 621 aa24.31■■□□□ 1.48
UBE2D3-220ENST00000505307 C19orf81C9J6K1 198 aa24.3■■□□□ 1.48
UBE2D3-220ENST00000505307 GJB1P08034 283 aa24.3■■□□□ 1.48
UBE2D3-220ENST00000505307 BACE1P56817 501 aa24.3■■□□□ 1.48
UBE2D3-220ENST00000505307 DYNLL1P63167 89 aaKnown RBP24.3■■□□□ 1.48
UBE2D3-220ENST00000505307 MTFR1Q15390 333 aa24.3■■□□□ 1.48
UBE2D3-220ENST00000505307 ANKRD13CQ8N6S4 541 aa24.3■■□□□ 1.48
UBE2D3-220ENST00000505307 TMOD4Q9NZQ9 345 aa24.3■■□□□ 1.48
UBE2D3-220ENST00000505307 CAPN2P17655 700 aa24.29■■□□□ 1.48
UBE2D3-220ENST00000505307 USP5P45974 858 aa24.29■■□□□ 1.48
UBE2D3-220ENST00000505307 FLT3LGP49771 235 aa24.29■■□□□ 1.48
UBE2D3-220ENST00000505307 ASCC2Q9H1I8 757 aaPredicted RBP24.29■■□□□ 1.48
UBE2D3-220ENST00000505307 DNAJC18Q9H819 358 aa24.29■■□□□ 1.48
UBE2D3-220ENST00000505307 ZBTB40Q9NUA8 1239 aa24.29■■□□□ 1.48
UBE2D3-220ENST00000505307 GABRQQ9UN88 632 aa24.29■■□□□ 1.48
UBE2D3-220ENST00000505307 MGAMO43451 1857 aa24.29■■□□□ 1.48
UBE2D3-220ENST00000505307 FOCADQ5VW36 1801 aa24.28■■□□□ 1.48
UBE2D3-220ENST00000505307 ATAD5Q96QE3 1844 aa24.28■■□□□ 1.48
UBE2D3-220ENST00000505307 ADCY3O60266 1144 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms