RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 NSUN4Q96CB9 384 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-219ENST00000505207 DHX36Q9H2U1 1008 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-219ENST00000505207 AS3MTQ9HBK9 375 aa13.66□□□□□ -0.22
UBE2D3-219ENST00000505207 HERC5Q9UII4 1024 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-219ENST00000505207 NR2E3Q9Y5X4 410 aa13.66□□□□□ -0.22
UBE2D3-219ENST00000505207 RFX7Q2KHR2 1363 aa13.66□□□□□ -0.22
UBE2D3-219ENST00000505207 H0YGN5 161 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 TRIM27P14373 513 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 FLT3LGP49771 235 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 SPP2Q13103 211 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 IRF5Q13568 498 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 TTC39AQ5SRH9 613 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 ZNF280CQ8ND82 737 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 TRIM34Q9BYJ4 488 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 GPR108Q9NPR9 543 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 PI4KBQ9UBF8 816 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 CENPFP49454 3210 aa13.65□□□□□ -0.22
UBE2D3-219ENST00000505207 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
UBE2D3-219ENST00000505207 ZKSCAN2Q63HK3 967 aa13.64□□□□□ -0.23
UBE2D3-219ENST00000505207 NAA16Q6N069 864 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-219ENST00000505207 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
UBE2D3-219ENST00000505207 COLQQ9Y215 455 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-219ENST00000505207 COL2A1P02458 1487 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 SGPL1O95470 568 aa13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 TFRCP02786 760 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 CAP2P40123 477 aa13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 FAM110CQ1W6H9 321 aa13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 ANKRD13CQ8N6S4 541 aa13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 U2AF1L4Q8WU68 220 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 CLUAP1Q96AJ1 413 aa13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 TAOK2Q9UL54 1235 aa13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 GABRQQ9UN88 632 aa13.63□□□□□ -0.23
UBE2D3-219ENST00000505207 DOCK2Q92608 1830 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 MKI67P46013 3256 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 PNMA6EA0A0J9YXQ4 647 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 BCAR3O75815 825 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 FARP2O94887 1054 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 ASNSP08243 561 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 MCAMP43121 646 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 PI16Q6UXB8 463 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 CERS3Q8IU89 383 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 SHISA4Q96DD7 197 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 UNC93B1Q9H1C4 597 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 TMOD4Q9NZQ9 345 aa13.62□□□□□ -0.23
UBE2D3-219ENST00000505207 CEP290O15078 2479 aa13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 SURF6O75683 361 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 INHAP05111 366 aa13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 PPP4CP60510 307 aa13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 ATP8B2P98198 1209 aa13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 SH3D19Q5HYK7 790 aa13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 FTSJ3Q8IY81 847 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 CRACR2BQ8N4Y2 399 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 SH3RF3Q8TEJ3 882 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 ZNF384Q8TF68 577 aa13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 ZNF512BQ96KM6 892 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 WDR18Q9BV38 432 aa13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
UBE2D3-219ENST00000505207 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 C19orf81C9J6K1 198 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 HLA-DOAP06340 250 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 ELNP15502 786 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 HMGCS2P54868 508 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 IRX3P78415 501 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 POLA2Q14181 598 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 TREML2Q5T2D2 321 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 TMED8Q6PL24 325 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 UBE2Q1Q7Z7E8 422 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 TMEM57Q8N5G2 664 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 SSH3Q8TE77 659 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 TGFBRAP1Q8WUH2 860 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 ASCC2Q9H1I8 757 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 SNRKQ9NRH2 765 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 ZSWIM8A7E2V4 1837 aa13.6□□□□□ -0.23
UBE2D3-219ENST00000505207 EVI5O60447 810 aa13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 SLURP2P0DP57 97 aa13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 DSG3P32926 999 aa13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 BACE1P56817 501 aa13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 CCDC84Q86UT8 332 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 CCAR1Q8IX12 1150 aaKnown RBP13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 GTF3C2Q8WUA4 911 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 DEFB118Q96PH6 123 aa13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 DOCK1Q14185 1865 aa13.59□□□□□ -0.23
UBE2D3-219ENST00000505207 HMGCRP04035 888 aa13.58□□□□□ -0.24
UBE2D3-219ENST00000505207 MAPKAPK5Q8IW41 473 aa13.58□□□□□ -0.24
UBE2D3-219ENST00000505207 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
UBE2D3-219ENST00000505207 HMX1Q9NP08 348 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-219ENST00000505207 PAK6Q9NQU5 681 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-219ENST00000505207 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-219ENST00000505207 USP17L10C9JJH3 530 aa13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 CYP2E1P05181 493 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 HOXA7P31268 230 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 MTMR2Q13614 643 aa13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 NECAB2Q7Z6G3 386 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms