RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CHAMP1Q96JM3 812 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 DDX28Q9NUL7 540 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 CFAP73A6NFT4 308 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 S100A1P23297 94 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 CLCN6P51797 869 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 GOLGA8FQ08AF8 430 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 GOLGA8DPQ0D2H9 430 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 EVI5O60447 810 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 GUCY1B2O75343 617 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 WTAPQ15007 396 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 TANGO6Q9C0B7 1094 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 MRPL46Q9H2W6 279 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 PSD3Q9NYI0 1048 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 PLEKHH1Q9ULM0 1364 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 POTEJP0CG39 1038 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 SCHIP1Q9P0W5 487 aaPredicted RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 KIF15Q9NS87 1388 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 HGSO14964 777 aaPredicted RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 DAB1O75553 588 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 CCNCP24863 283 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 CTCFP49711 727 aaPredicted RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 QKIQ96PU8 341 aaKnown RBP eCLIP5.31□□□□□ -1.564e-29■■■■□ 21.2
NEAT1-202ENST00000501122 MPHOSPH9Q99550 1183 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 S100A9P06702 114 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 ICA1Q05084 483 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 NLRP9Q7RTR0 991 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 TUBB6Q9BUF5 446 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 MMADHCQ9H3L0 296 aaPredicted RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 HDLBPQ00341 1268 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 GLE1Q53GS7 698 aaKnown RBP5.31□□□□□ -1.56
NEAT1-202ENST00000501122 HOOK2Q96ED9 719 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 ANLNQ9NQW6 1124 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 GUCA1BQ9UMX6 200 aa5.31□□□□□ -1.56
NEAT1-202ENST00000501122 ALS2CLQ60I27 953 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 MRPL28Q13084 256 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 KMT5BQ4FZB7 885 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 LRRC59Q96AG4 307 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 FTOQ9C0B1 505 aaKnown RBP eCLIP5.3□□□□□ -1.565e-89■■■□□ 15.1
NEAT1-202ENST00000501122 HSPA9P38646 679 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 ZNF428Q96B54 188 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 KCNB1Q14721 858 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 CCDC138Q96M89 665 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 NDUFA5Q16718 116 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 ATP8A1Q9Y2Q0 1164 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 LRPAP1P30533 357 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 ASCC2Q9H1I8 757 aaPredicted RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 ETF1P62495 437 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 APBA1Q02410 837 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 DRP2Q13474 957 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 SNX29Q8TEQ0 813 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 IFNKQ9P0W0 207 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 ANGPTL2Q9UKU9 493 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 BIN1O00499 593 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 CYLC1P35663 651 aaPredicted RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 ATPIF1Q9UII2 106 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 ATP5DP30049 168 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 MLH1P40692 756 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 EZH1Q92800 747 aaPredicted RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 GOLGA8RI6L899 631 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 XPOTO43592 962 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 PAWRQ96IZ0 340 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 UBAC1Q9BSL1 405 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 GUCY2FP51841 1108 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 CCDC122Q5T0U0 273 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 SYCE1LA8MT33 242 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 CAPN9O14815 690 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 MX2P20592 715 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 CALML6Q8TD86 181 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 KRT82Q9NSB4 513 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 RPGRIP1LQ68CZ1 1315 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 N4BP3O15049 544 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 FGFR1OPO95684 399 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 EIF2B2P49770 351 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 SCRN1Q12765 414 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 NECTIN2Q92692 538 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 PDE5AO76074 875 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 APOA1P02647 267 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 HSPA1AP0DMV8 641 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 HSPA1BP0DMV9 641 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 SNX1Q13596 522 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 ZNF449Q6P9G9 518 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 PPP1R42Q7Z4L9 355 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 DBNLQ9UJU6 430 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 USP37Q86T82 979 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 DDX54Q8TDD1 881 aaKnown RBP5.3□□□□□ -1.56
NEAT1-202ENST00000501122 RAD21L1Q9H4I0 556 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 EVC2Q86UK5 1308 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 HIP1O00291 1037 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 CCDC144BQ3MJ40 725 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 OLFML2BQ68BL8 750 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 HVCN1Q96D96 273 aa5.3□□□□□ -1.56
NEAT1-202ENST00000501122 WDR60Q8WVS4 1066 aa5.29□□□□□ -1.56
NEAT1-202ENST00000501122 SPTLC3Q9NUV7 552 aa5.29□□□□□ -1.56
NEAT1-202ENST00000501122 GID8Q9NWU2 228 aa5.29□□□□□ -1.56
NEAT1-202ENST00000501122 CCDC151A5D8V7 595 aa5.29□□□□□ -1.56
NEAT1-202ENST00000501122 TRPA1O75762 1119 aa5.29□□□□□ -1.56
NEAT1-202ENST00000501122 MAGEA8P43361 318 aa5.29□□□□□ -1.56
NEAT1-202ENST00000501122 MTRF1LQ9UGC7 380 aaKnown RBP5.29□□□□□ -1.56
NEAT1-202ENST00000501122 ZNF330Q9Y3S2 320 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms