RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 STAP2Q9UGK3 403 aa17.62■□□□□ 0.41
VARS-228ENST00000495010 FAM196BA6NMK8 535 aa17.61■□□□□ 0.41
VARS-228ENST00000495010 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
VARS-228ENST00000495010 MAP4K4O95819 1239 aaPredicted RBP17.61■□□□□ 0.41
VARS-228ENST00000495010 HMGCRP04035 888 aa17.61■□□□□ 0.41
VARS-228ENST00000495010 TFCP2Q12800 502 aa17.61■□□□□ 0.41
VARS-228ENST00000495010 CRISPLD2Q9H0B8 497 aa17.61■□□□□ 0.41
VARS-228ENST00000495010 AS3MTQ9HBK9 375 aa17.61■□□□□ 0.41
VARS-228ENST00000495010 PTPRFP10586 1907 aa17.6■□□□□ 0.41
VARS-228ENST00000495010 SRGAP3O43295 1099 aa17.6■□□□□ 0.41
VARS-228ENST00000495010 HMGCS2P54868 508 aa17.6■□□□□ 0.41
VARS-228ENST00000495010 RHBDL3P58872 404 aa17.6■□□□□ 0.41
VARS-228ENST00000495010 ANKLE1Q8NAG6 615 aa17.6■□□□□ 0.41
VARS-228ENST00000495010 NOL10Q9BSC4 688 aaKnown RBP17.6■□□□□ 0.41
VARS-228ENST00000495010 HMX1Q9NP08 348 aaPredicted RBP17.6■□□□□ 0.41
VARS-228ENST00000495010 RAI14Q9P0K7 980 aa17.6■□□□□ 0.41
VARS-228ENST00000495010 PHIPQ8WWQ0 1821 aa17.6■□□□□ 0.41
VARS-228ENST00000495010 USP17L5A8MUK1 530 aa17.59■□□□□ 0.41
VARS-228ENST00000495010 C7orf61Q8IZ16 206 aa17.59■□□□□ 0.41
VARS-228ENST00000495010 MEIS3Q99687 375 aa17.59■□□□□ 0.41
VARS-228ENST00000495010 RPTORQ8N122 1335 aa17.58■□□□□ 0.4
VARS-228ENST00000495010 GNAI3P08754 354 aa17.58■□□□□ 0.4
VARS-228ENST00000495010 CT47B1P0C2W7 299 aaPredicted RBP17.58■□□□□ 0.4
VARS-228ENST00000495010 CAP2P40123 477 aa17.58■□□□□ 0.4
VARS-228ENST00000495010 IRX3P78415 501 aaPredicted RBP17.58■□□□□ 0.4
VARS-228ENST00000495010 TEX11Q8IYF3 940 aa17.58■□□□□ 0.4
VARS-228ENST00000495010 SPATA5Q8NB90 893 aa17.58■□□□□ 0.4
VARS-228ENST00000495010 DIS3LQ8TF46 1054 aaKnown RBP17.58■□□□□ 0.4
VARS-228ENST00000495010 CDCA7LQ96GN5 454 aa17.58■□□□□ 0.4
VARS-228ENST00000495010 ASCC2Q9H1I8 757 aaPredicted RBP17.58■□□□□ 0.4
VARS-228ENST00000495010 HMG20BQ9P0W2 317 aa17.58■□□□□ 0.4
VARS-228ENST00000495010 DLL1O00548 723 aa17.57■□□□□ 0.4
VARS-228ENST00000495010 SOX1O00570 391 aaPredicted RBP17.57■□□□□ 0.4
VARS-228ENST00000495010 TBC1D9Q6ZT07 1266 aa17.57■□□□□ 0.4
VARS-228ENST00000495010 NSUN4Q96CB9 384 aaKnown RBP17.57■□□□□ 0.4
VARS-228ENST00000495010 LRCH3Q96II8 777 aa17.57■□□□□ 0.4
VARS-228ENST00000495010 TRIM34Q9BYJ4 488 aa17.57■□□□□ 0.4
VARS-228ENST00000495010 NBPF3Q9H094 633 aa17.57■□□□□ 0.4
VARS-228ENST00000495010 TMOD4Q9NZQ9 345 aa17.57■□□□□ 0.4
VARS-228ENST00000495010 LRP2BPQ9P2M1 347 aa17.57■□□□□ 0.4
VARS-228ENST00000495010 HERC5Q9UII4 1024 aaKnown RBP17.57■□□□□ 0.4
VARS-228ENST00000495010 C11orf49Q9H6J7 331 aa17.56■□□□□ 0.4
VARS-228ENST00000495010 ZMYND8Q9ULU4 1186 aaPredicted RBP17.56■□□□□ 0.4
VARS-228ENST00000495010 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
VARS-228ENST00000495010 BMP8BP34820 402 aa17.55■□□□□ 0.4
VARS-228ENST00000495010 SH3D19Q5HYK7 790 aa17.55■□□□□ 0.4
VARS-228ENST00000495010 CCAR1Q8IX12 1150 aaKnown RBP17.55■□□□□ 0.4
VARS-228ENST00000495010 ZNF384Q8TF68 577 aa17.55■□□□□ 0.4
VARS-228ENST00000495010 DHX36Q9H2U1 1008 aaKnown RBP17.55■□□□□ 0.4
VARS-228ENST00000495010 PI4KBQ9UBF8 816 aa17.55■□□□□ 0.4
VARS-228ENST00000495010 GJD2Q9UKL4 321 aa17.55■□□□□ 0.4
VARS-228ENST00000495010 DOCK3Q8IZD9 2030 aa17.55■□□□□ 0.4
VARS-228ENST00000495010 LOC285556D6RIA3 1793 aa17.54■□□□□ 0.4
VARS-228ENST00000495010 BAG3O95817 575 aa17.54■□□□□ 0.4
VARS-228ENST00000495010 UQCRFS1P1P0C7P4 283 aa17.54■□□□□ 0.4
VARS-228ENST00000495010 CYP2B6P20813 491 aa17.54■□□□□ 0.4
VARS-228ENST00000495010 TRIM32Q13049 653 aa17.54■□□□□ 0.4
VARS-228ENST00000495010 G3BP1Q13283 466 aaKnown RBP eCLIP17.54■□□□□ 0.45e-7■■■□□ 16.2
VARS-228ENST00000495010 PI16Q6UXB8 463 aa17.54■□□□□ 0.4
VARS-228ENST00000495010 GDF15Q99988 308 aa17.54■□□□□ 0.4
VARS-228ENST00000495010 NUDT12Q9BQG2 462 aa17.54■□□□□ 0.4
VARS-228ENST00000495010 ASNSP08243 561 aa17.53■□□□□ 0.4
VARS-228ENST00000495010 PLCG2P16885 1265 aa17.53■□□□□ 0.4
VARS-228ENST00000495010 ARID4AP29374 1257 aaPredicted RBP17.53■□□□□ 0.4
VARS-228ENST00000495010 BACE1P56817 501 aa17.53■□□□□ 0.4
VARS-228ENST00000495010 MTMR2Q13614 643 aa17.53■□□□□ 0.4
VARS-228ENST00000495010 PDE3AQ14432 1141 aa17.53■□□□□ 0.4
VARS-228ENST00000495010 CRACR2BQ8N4Y2 399 aaPredicted RBP17.53■□□□□ 0.4
VARS-228ENST00000495010 GPRC5AQ8NFJ5 357 aa17.53■□□□□ 0.4
VARS-228ENST00000495010 SH3RF3Q8TEJ3 882 aaPredicted RBP17.53■□□□□ 0.4
VARS-228ENST00000495010 WDR18Q9BV38 432 aa17.53■□□□□ 0.4
VARS-228ENST00000495010 MORF4L1Q9UBU8 362 aa17.53■□□□□ 0.4
VARS-228ENST00000495010 ATAD5Q96QE3 1844 aa17.53■□□□□ 0.4
VARS-228ENST00000495010 SYN1P17600 705 aa17.52■□□□□ 0.4
VARS-228ENST00000495010 MTX1Q13505 466 aa17.52■□□□□ 0.4
VARS-228ENST00000495010 RRP1BQ14684 758 aaKnown RBP17.52■□□□□ 0.4
VARS-228ENST00000495010 NAA16Q6N069 864 aaPredicted RBP17.52■□□□□ 0.4
VARS-228ENST00000495010 TRMT44Q8IYL2 757 aaKnown RBP17.52■□□□□ 0.4
VARS-228ENST00000495010 TRMT2AQ8IZ69 625 aaKnown RBP17.52■□□□□ 0.4
VARS-228ENST00000495010 SOCS4Q8WXH5 440 aa17.52■□□□□ 0.4
VARS-228ENST00000495010 TRIB2Q92519 343 aa17.52■□□□□ 0.4
VARS-228ENST00000495010 CWC22Q9HCG8 908 aaKnown RBP17.52■□□□□ 0.4
VARS-228ENST00000495010 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.4
VARS-228ENST00000495010 OGDHLQ9ULD0 1010 aa17.52■□□□□ 0.4
VARS-228ENST00000495010 C19orf81C9J6K1 198 aa17.51■□□□□ 0.39
VARS-228ENST00000495010 PRKAR2AP13861 404 aaKnown RBP17.51■□□□□ 0.39
VARS-228ENST00000495010 MAPK4P31152 587 aa17.51■□□□□ 0.39
VARS-228ENST00000495010 HOXA7P31268 230 aaPredicted RBP17.51■□□□□ 0.39
VARS-228ENST00000495010 MCAMP43121 646 aa17.51■□□□□ 0.39
VARS-228ENST00000495010 GPR153Q6NV75 609 aa17.51■□□□□ 0.39
VARS-228ENST00000495010 ARHGAP45Q92619 1136 aa17.51■□□□□ 0.39
VARS-228ENST00000495010 P2RX7Q99572 595 aaKnown RBP17.51■□□□□ 0.39
VARS-228ENST00000495010 SZT2Q5T011 3432 aa17.51■□□□□ 0.39
VARS-228ENST00000495010 ALPK3Q96L96 1907 aa17.51■□□□□ 0.39
VARS-228ENST00000495010 USP17L10C9JJH3 530 aa17.5■□□□□ 0.39
VARS-228ENST00000495010 GNAI2P04899 355 aa17.5■□□□□ 0.39
VARS-228ENST00000495010 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
VARS-228ENST00000495010 HERVK_113P62684 666 aa17.5■□□□□ 0.39
VARS-228ENST00000495010 TTC39AQ5SRH9 613 aa17.5■□□□□ 0.39
VARS-228ENST00000495010 FOXP4Q8IVH2 680 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms