RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 GFRA2O00451 464 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 IGSF3O75054 1194 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 FGRP09769 529 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 PREPP48147 710 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 SOX9P48436 509 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 EIF6P56537 245 aaKnown RBP6.12□□□□□ -1.43
CLK1-213ENST00000492793 CYFIP1Q7L576 1253 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 ALYREFQ86V81 257 aaKnown RBP6.12□□□□□ -1.43
CLK1-213ENST00000492793 REXO1Q8N1G1 1221 aaKnown RBP6.12□□□□□ -1.43
CLK1-213ENST00000492793 PMFBP1Q8TBY8 1022 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 GMLQ99445 158 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 DNAJC2Q99543 621 aaKnown RBP6.12□□□□□ -1.43
CLK1-213ENST00000492793 KCNF1Q9H3M0 494 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 LGR6Q9HBX8 967 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 DISC1Q9NRI5 854 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 REV1Q9UBZ9 1251 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 STRIP2Q9ULQ0 834 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 PCDHGC5Q9Y5F6 944 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 ACTL7BQ9Y614 415 aa6.12□□□□□ -1.43
CLK1-213ENST00000492793 HTR3BO95264 441 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 MBTPS1Q14703 1052 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 PPP2R5EQ16537 467 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 C2CD4AQ8NCU7 369 aaPredicted RBP6.11□□□□□ -1.43
CLK1-213ENST00000492793 RNF214Q8ND24 703 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 ZNF507Q8TCN5 953 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 UBXN4Q92575 508 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 UTP4Q969X6 686 aaKnown RBP6.11□□□□□ -1.43
CLK1-213ENST00000492793 YIPF2Q9BWQ6 316 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 WNT10AQ9GZT5 417 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 FAM105AQ9NUU6 356 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 DAGLAQ9Y4D2 1042 aa6.11□□□□□ -1.43
CLK1-213ENST00000492793 SYNGAP1Q96PV0 1343 aa6.1□□□□□ -1.43
CLK1-213ENST00000492793 FANCGO15287 622 aa6.1□□□□□ -1.43
CLK1-213ENST00000492793 TIAF1O95411 115 aa6.1□□□□□ -1.43
CLK1-213ENST00000492793 IMPDH2P12268 514 aa6.1□□□□□ -1.43
CLK1-213ENST00000492793 ADGRE1Q14246 886 aa6.1□□□□□ -1.43
CLK1-213ENST00000492793 ZBTB37Q5TC79 503 aa6.1□□□□□ -1.43
CLK1-213ENST00000492793 TXNRD3Q86VQ6 643 aa6.1□□□□□ -1.43
CLK1-213ENST00000492793 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.1□□□□□ -1.43
CLK1-213ENST00000492793 SMYD4Q8IYR2 804 aaPredicted RBP6.1□□□□□ -1.43
CLK1-213ENST00000492793 FAM13CQ8NE31 585 aa6.1□□□□□ -1.43
CLK1-213ENST00000492793 FBLIM1Q8WUP2 373 aa6.1□□□□□ -1.43
CLK1-213ENST00000492793 FAM86C2PA6NEL3 165 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 BMP3P12645 472 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 CHRNA4P43681 627 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 CHMP4BP1P59074 171 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 SGO2Q562F6 1265 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 HID1Q8IV36 788 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 CKAP2LQ8IYA6 745 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 KCT2Q8NC54 265 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 XAGE3Q8WTP9 111 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 ISL2Q96A47 359 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 DCAF5Q96JK2 942 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 MEGF10Q96KG7 1140 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 UBL7Q96S82 380 aaPredicted RBP6.09□□□□□ -1.43
CLK1-213ENST00000492793 ANTXR1Q9H6X2 564 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 EHMT1Q9H9B1 1298 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 ZNF408Q9H9D4 720 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 ZNRF3Q9ULT6 936 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 TACC3Q9Y6A5 838 aa6.09□□□□□ -1.43
CLK1-213ENST00000492793 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.08□□□□□ -1.44
CLK1-213ENST00000492793 KRBA1A5PL33 1030 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 C1QTNF9BB2RNN3 333 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 NEFMP07197 916 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 NFICP08651 508 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 ETFBP38117 255 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 NFKBIBQ15653 356 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 LRRFIP1Q32MZ4 808 aaKnown RBP6.08□□□□□ -1.44
CLK1-213ENST00000492793 CDPF1Q6NVV7 123 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 PHACTR4Q8IZ21 702 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 ACSF2Q96CM8 615 aaPredicted RBP6.08□□□□□ -1.44
CLK1-213ENST00000492793 DPH2Q9BQC3 489 aaPredicted RBP6.08□□□□□ -1.44
CLK1-213ENST00000492793 HIRIP3Q9BW71 556 aaPredicted RBP6.08□□□□□ -1.44
CLK1-213ENST00000492793 TRIM55Q9BYV6 548 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 PCOLCE2Q9UKZ9 415 aa6.08□□□□□ -1.44
CLK1-213ENST00000492793 UPK3BL1B0FP48 263 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 CHURC1-FNTBB4DL54 471 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 UPK3BL2E5RIL1 263 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 SMAD7O15105 426 aaKnown RBP6.07□□□□□ -1.44
CLK1-213ENST00000492793 ATE1O95260 518 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 RAG1P15918 1043 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 MAP4P27816 1152 aaKnown RBP6.07□□□□□ -1.44
CLK1-213ENST00000492793 GATA4P43694 442 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 YARSP54577 528 aaKnown RBP6.07□□□□□ -1.44
CLK1-213ENST00000492793 RING1Q06587 406 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 ARSHQ5FYA8 562 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 OVOS1Q6IE37 1185 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 RUFY4Q6ZNE9 571 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 ANKS3Q6ZW76 656 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 CD163Q86VB7 1156 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 LSRQ86X29 649 aaPredicted RBP6.07□□□□□ -1.44
CLK1-213ENST00000492793 FAM46AQ96IP4 442 aaKnown RBP6.07□□□□□ -1.44
CLK1-213ENST00000492793 SHDQ96IW2 340 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 TMEM87BQ96K49 555 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 FBRSQ9HAH7 460 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 GMIPQ9P107 970 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 TJP2Q9UDY2 1190 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 ADAM30Q9UKF2 790 aa6.07□□□□□ -1.44
CLK1-213ENST00000492793 SLC22A31A6NKX4 558 aa6.06□□□□□ -1.44
CLK1-213ENST00000492793 U2SURPO15042 1029 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms