RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TBC1D10BQ4KMP7 808 aaPredicted RBP26.71■■□□□ 1.87
USF3-203ENST00000491165 ZKSCAN5Q9Y2L8 839 aa26.71■■□□□ 1.87
USF3-203ENST00000491165 LAMA4Q16363 1823 aa26.71■■□□□ 1.87
USF3-203ENST00000491165 CYP21A2P08686 494 aa26.71■■□□□ 1.87
USF3-203ENST00000491165 SLC4A8Q2Y0W8 1093 aa26.71■■□□□ 1.87
USF3-203ENST00000491165 MAPKAPK5Q8IW41 473 aa26.71■■□□□ 1.87
USF3-203ENST00000491165 MTMR14Q8NCE2 650 aa26.71■■□□□ 1.87
USF3-203ENST00000491165 ASTN2O75129 1339 aaPredicted RBP26.7■■□□□ 1.87
USF3-203ENST00000491165 MYH1P12882 1939 aa26.7■■□□□ 1.87
USF3-203ENST00000491165 SYT1P21579 422 aa26.7■■□□□ 1.86
USF3-203ENST00000491165 FLT1P17948 1338 aa26.7■■□□□ 1.86
USF3-203ENST00000491165 ZC3H4Q9UPT8 1303 aaKnown RBP26.7■■□□□ 1.86
USF3-203ENST00000491165 CYP2D7A0A087X1C5 515 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 CLRN2A0PK11 232 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 HAND2P61296 217 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 COL9A3Q14050 684 aaPredicted RBP26.69■■□□□ 1.86
USF3-203ENST00000491165 CREB3L3Q68CJ9 461 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 TRPM4Q8TD43 1214 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 ATP6V1DQ9Y5K8 247 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 GLTPD2A6NH11 291 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 SLC27A2O14975 620 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 PICALMQ13492 652 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 LARP6Q9BRS8 491 aaKnown RBP26.69■■□□□ 1.86
USF3-203ENST00000491165 NBPF3Q9H094 633 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 SCAF8Q9UPN6 1271 aaKnown RBP26.69■■□□□ 1.86
USF3-203ENST00000491165 CNPY2Q9Y2B0 182 aa26.69■■□□□ 1.86
USF3-203ENST00000491165 PLCG2P16885 1265 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 USP5P45974 858 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 KCNB2Q92953 911 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 TM6SF1Q9BZW5 370 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 NAPBQ9H115 298 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 U3KPZ7 1027 aaPredicted RBP26.68■■□□□ 1.86
USF3-203ENST00000491165 LAMB1P07942 1786 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 F13A1P00488 732 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 DPY19L2Q6NUT2 758 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 ZFPM1Q8IX07 1006 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 JAKMIP1Q96N16 626 aaKnown RBP26.68■■□□□ 1.86
USF3-203ENST00000491165 ATP8A2Q9NTI2 1148 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 PDRG1Q9NUG6 133 aa26.68■■□□□ 1.86
USF3-203ENST00000491165 RRP9O43818 475 aaKnown RBP26.67■■□□□ 1.86
USF3-203ENST00000491165 CPA1P15085 419 aa26.67■■□□□ 1.86
USF3-203ENST00000491165 TDO2P48775 406 aa26.67■■□□□ 1.86
USF3-203ENST00000491165 ALX1Q15699 326 aa26.67■■□□□ 1.86
USF3-203ENST00000491165 CCDC183Q5T5S1 534 aa26.67■■□□□ 1.86
USF3-203ENST00000491165 FAM198AQ9UFP1 575 aa26.67■■□□□ 1.86
USF3-203ENST00000491165 HIRAP54198 1017 aaPredicted RBP26.66■■□□□ 1.86
USF3-203ENST00000491165 CTR9Q6PD62 1173 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 CERS3Q8IU89 383 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 FAM184AQ8NB25 1140 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 ZSCAN31Q96LW9 406 aaPredicted RBP26.66■■□□□ 1.86
USF3-203ENST00000491165 SH2B1Q9NRF2 756 aaPredicted RBP26.66■■□□□ 1.86
USF3-203ENST00000491165 CYP46A1Q9Y6A2 500 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 ZMYM6O95789 1325 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 USP17L12C9JPN9 530 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 USP17L21D6R901 530 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 CYP2D6P10635 497 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 UBE2HP62256 183 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 KIF4BQ2VIQ3 1234 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 ZSWIM6Q9HCJ5 1215 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 SAP30BPQ9UHR5 308 aaKnown RBP26.66■■□□□ 1.86
USF3-203ENST00000491165 TACC3Q9Y6A5 838 aa26.66■■□□□ 1.86
USF3-203ENST00000491165 H7C1D1 291 aa26.65■■□□□ 1.86
USF3-203ENST00000491165 LARGE1O95461 756 aa26.65■■□□□ 1.86
USF3-203ENST00000491165 TERF1P54274 439 aa26.65■■□□□ 1.86
USF3-203ENST00000491165 ADCK5Q3MIX3 580 aa26.65■■□□□ 1.86
USF3-203ENST00000491165 SPDYE2Q495Y8 402 aa26.65■■□□□ 1.86
USF3-203ENST00000491165 L3MBTL3Q96JM7 780 aaPredicted RBP26.65■■□□□ 1.86
USF3-203ENST00000491165 MCM9Q9NXL9 1143 aa26.65■■□□□ 1.86
USF3-203ENST00000491165 ZNF70Q9UC06 446 aaPredicted RBP26.65■■□□□ 1.86
USF3-203ENST00000491165 LETM1O95202 739 aaPredicted RBP26.65■■□□□ 1.86
USF3-203ENST00000491165 TCP10Q12799 353 aa26.65■■□□□ 1.86
USF3-203ENST00000491165 HSP90AA2PQ14568 343 aaPredicted RBP26.65■■□□□ 1.86
USF3-203ENST00000491165 UBE2Q2Q8WVN8 375 aa26.65■■□□□ 1.86
USF3-203ENST00000491165 NACAP1Q9BZK3 213 aa26.65■■□□□ 1.86
USF3-203ENST00000491165 POTECB2RU33 542 aa26.64■■□□□ 1.86
USF3-203ENST00000491165 GIMAP6Q6P9H5 292 aa26.64■■□□□ 1.86
USF3-203ENST00000491165 STOX1Q6ZVD7 989 aa26.64■■□□□ 1.86
USF3-203ENST00000491165 CCDC83Q8IWF9 413 aa26.64■■□□□ 1.86
USF3-203ENST00000491165 NKX2-3Q8TAU0 364 aa26.64■■□□□ 1.86
USF3-203ENST00000491165 IDI2Q9BXS1 227 aa26.64■■□□□ 1.86
USF3-203ENST00000491165 INCENPQ9NQS7 918 aa26.64■■□□□ 1.86
USF3-203ENST00000491165 ZKSCAN1P17029 563 aaPredicted RBP26.63■■□□□ 1.85
USF3-203ENST00000491165 STK11IPQ8N1F8 1099 aa26.63■■□□□ 1.85
USF3-203ENST00000491165 SIPA1L1O43166 1804 aa26.63■■□□□ 1.85
USF3-203ENST00000491165 POLR2AP24928 1970 aaKnown RBP26.63■■□□□ 1.85
USF3-203ENST00000491165 GJB2P29033 226 aa26.63■■□□□ 1.85
USF3-203ENST00000491165 PLCD1P51178 756 aa26.63■■□□□ 1.85
USF3-203ENST00000491165 CTDSPL2Q05D32 466 aa26.63■■□□□ 1.85
USF3-203ENST00000491165 UVSSAQ2YD98 709 aa26.63■■□□□ 1.85
USF3-203ENST00000491165 TBC1D10CQ8IV04 446 aa26.63■■□□□ 1.85
USF3-203ENST00000491165 WDR90Q96KV7 1748 aa26.63■■□□□ 1.85
USF3-203ENST00000491165 MINDY4BA8MYZ0 360 aa26.62■■□□□ 1.85
USF3-203ENST00000491165 TCP10L2B9ZVM9 353 aa26.62■■□□□ 1.85
USF3-203ENST00000491165 MMP14P50281 582 aa26.62■■□□□ 1.85
USF3-203ENST00000491165 CSPP1Q1MSJ5 1256 aa26.62■■□□□ 1.85
USF3-203ENST00000491165 VEZTQ9HBM0 779 aa26.62■■□□□ 1.85
USF3-203ENST00000491165 SCN4AP35499 1836 aa26.62■■□□□ 1.85
USF3-203ENST00000491165 SLURP2P0DP57 97 aa26.62■■□□□ 1.85
USF3-203ENST00000491165 OSBPL5Q9H0X9 879 aaPredicted RBP26.62■■□□□ 1.85
USF3-203ENST00000491165 CTNNA3Q9UI47 895 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms