RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CLSTN2Q9H4D0 955 aa21.35■■□□□ 1.01
COL16A1-215ENST00000488897 HMGB1P09429 215 aaKnown RBP21.34■■□□□ 1.01
COL16A1-215ENST00000488897 CYP7A1P22680 504 aa21.34■■□□□ 1.01
COL16A1-215ENST00000488897 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
COL16A1-215ENST00000488897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL16A1-215ENST00000488897 OSBP2Q969R2 916 aa21.34■■□□□ 1.01
COL16A1-215ENST00000488897 SEMA3EO15041 775 aa21.34■■□□□ 1.01
COL16A1-215ENST00000488897 MICALL2Q8IY33 904 aa21.34■■□□□ 1.01
COL16A1-215ENST00000488897 LLPHQ9BRT6 129 aaKnown RBP21.34■■□□□ 1.01
COL16A1-215ENST00000488897 VPS33BQ9H267 617 aa21.34■■□□□ 1.01
COL16A1-215ENST00000488897 AATFQ9NY61 560 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL16A1-215ENST00000488897 CNOT7Q9UIV1 285 aaKnown RBP21.34■■□□□ 1.01
COL16A1-215ENST00000488897 TIAM2Q8IVF5 1701 aa21.34■■□□□ 1.01
COL16A1-215ENST00000488897 ZNF646O15015 1829 aaPredicted RBP21.33■■□□□ 1.01
COL16A1-215ENST00000488897 H3BQV1 296 aa21.33■■□□□ 1.01
COL16A1-215ENST00000488897 GTF2F1P35269 517 aaKnown RBP eCLIP21.33■■□□□ 1.01
COL16A1-215ENST00000488897 RESTQ13127 1097 aa21.33■■□□□ 1.01
COL16A1-215ENST00000488897 IFFO2Q5TF58 517 aa21.33■■□□□ 1.01
COL16A1-215ENST00000488897 GMLQ99445 158 aa21.33■■□□□ 1.01
COL16A1-215ENST00000488897 CFAP45Q9UL16 551 aa21.33■■□□□ 1.01
COL16A1-215ENST00000488897 DICER1Q9UPY3 1922 aaKnown RBP21.33■■□□□ 1
COL16A1-215ENST00000488897 M0R2C6 588 aa21.33■■□□□ 1
COL16A1-215ENST00000488897 JAK2O60674 1132 aa21.33■■□□□ 1
COL16A1-215ENST00000488897 CYP21A2P08686 494 aa21.33■■□□□ 1
COL16A1-215ENST00000488897 BRF1Q92994 677 aa21.33■■□□□ 1
COL16A1-215ENST00000488897 NBPF9Q3BBW0 867 aa21.32■■□□□ 1
COL16A1-215ENST00000488897 CKAP2LQ8IYA6 745 aa21.32■■□□□ 1
COL16A1-215ENST00000488897 SPC24Q8NBT2 197 aa21.32■■□□□ 1
COL16A1-215ENST00000488897 KCNF1Q9H3M0 494 aa21.32■■□□□ 1
COL16A1-215ENST00000488897 TCRBV5S4A2TA0A5A2 114 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 NAA16Q6N069 864 aaPredicted RBP21.31■■□□□ 1
COL16A1-215ENST00000488897 C17orf53Q8N3J3 647 aaPredicted RBP21.31■■□□□ 1
COL16A1-215ENST00000488897 BICD2Q8TD16 824 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 PRMT6Q96LA8 375 aaPredicted RBP21.31■■□□□ 1
COL16A1-215ENST00000488897 PRKAB2O43741 272 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 CAVIN2O95810 425 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 ADD2P35612 726 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 MAP3K12Q12852 859 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 TNIP1Q15025 636 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 ANO6Q4KMQ2 910 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 TRPM4Q8TD43 1214 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 ARMT1Q9H993 441 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 CBX8Q9HC52 389 aa21.31■■□□□ 1
COL16A1-215ENST00000488897 CLRN2A0PK11 232 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 SMIM22K7EJ46 135 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 USP17L8P0C7I0 530 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 POTEIP0CG38 1075 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 POTEJP0CG39 1038 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 SLURP2P0DP57 97 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 FGD1P98174 961 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 EVX2Q03828 476 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 LUZP1Q86V48 1076 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 SMARCC2Q8TAQ2 1214 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 PGBD1Q96JS3 809 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 PFKFB2O60825 505 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 CRKP46108 304 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 GPC2Q8N158 579 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 HELLSQ9NRZ9 838 aa21.3■■□□□ 1
COL16A1-215ENST00000488897 POTECB2RU33 542 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 TTF1Q15361 905 aaPredicted RBP21.29■■□□□ 1
COL16A1-215ENST00000488897 DHX32Q7L7V1 743 aaKnown RBP21.29■■□□□ 1
COL16A1-215ENST00000488897 TDRD3Q9H7E2 651 aaKnown RBP21.29■■□□□ 1
COL16A1-215ENST00000488897 KIF3AQ9Y496 699 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 DAGLAQ9Y4D2 1042 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 RNF113AO15541 343 aaKnown RBP21.29■■□□□ 1
COL16A1-215ENST00000488897 NR1I2O75469 434 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 CFAP100Q494V2 611 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 LCORLQ8N3X6 602 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 TBC1D22AQ8WUA7 517 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 RRAGCQ9HB90 399 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 NMRK2Q9NPI5 230 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 PYCARDQ9ULZ3 195 aa21.29■■□□□ 1
COL16A1-215ENST00000488897 GLTPD2A6NH11 291 aa21.28■■□□□ 1
COL16A1-215ENST00000488897 HIRAP54198 1017 aaPredicted RBP21.28■■□□□ 1
COL16A1-215ENST00000488897 SCRN1Q12765 414 aa21.28■■□□□ 1
COL16A1-215ENST00000488897 DPY19L2Q6NUT2 758 aa21.28■■□□□ 1
COL16A1-215ENST00000488897 DSCC1Q9BVC3 393 aa21.28■■□□□ 1
COL16A1-215ENST00000488897 SALL1Q9NSC2 1324 aa21.28■■□□□ 1
COL16A1-215ENST00000488897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.28■■□□□ 1
COL16A1-215ENST00000488897 STK11IPQ8N1F8 1099 aa21.28■■□□□ 1
COL16A1-215ENST00000488897 SDR42E1Q8WUS8 393 aa21.28■■□□□ 1
COL16A1-215ENST00000488897 BTDP43251 543 aa21.27■■□□□ 1
COL16A1-215ENST00000488897 SH3RF3Q8TEJ3 882 aaPredicted RBP21.27■■□□□ 1
COL16A1-215ENST00000488897 DDX11Q96FC9 970 aa21.27■■□□□ 1
COL16A1-215ENST00000488897 MYH2Q9UKX2 1941 aa21.27■■□□□ 1
COL16A1-215ENST00000488897 MBD4O95243 580 aa21.27■■□□□ 1
COL16A1-215ENST00000488897 PRAMEF18Q5VWM3 479 aa21.27■■□□□ 1
COL16A1-215ENST00000488897 APOBEC3HQ6NTF7 200 aaKnown RBP21.27■■□□□ 1
COL16A1-215ENST00000488897 OGFOD1Q8N543 542 aa21.27■■□□□ 1
COL16A1-215ENST00000488897 GPRC5DQ9NZD1 345 aa21.27■■□□□ 1
COL16A1-215ENST00000488897 CHMP4CQ96CF2 233 aa21.26■□□□□ 0.99
COL16A1-215ENST00000488897 MYOZ2Q9NPC6 264 aa21.26■□□□□ 0.99
COL16A1-215ENST00000488897 MAST3O60307 1309 aa21.26■□□□□ 0.99
COL16A1-215ENST00000488897 ZNF165P49910 485 aa21.26■□□□□ 0.99
COL16A1-215ENST00000488897 STOX1Q6ZVD7 989 aa21.26■□□□□ 0.99
COL16A1-215ENST00000488897 TCP10Q12799 353 aa21.25■□□□□ 0.99
COL16A1-215ENST00000488897 PICALMQ13492 652 aa21.25■□□□□ 0.99
COL16A1-215ENST00000488897 EAPPQ56P03 285 aaPredicted RBP21.25■□□□□ 0.99
COL16A1-215ENST00000488897 SPTY2D1Q68D10 685 aaPredicted RBP21.25■□□□□ 0.99
COL16A1-215ENST00000488897 ATL3Q6DD88 541 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms