RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 AKAP2Q9Y2D5 859 aa10.57□□□□□ -0.72
PRKCB-208ENST00000487674 MAST2Q6P0Q8 1798 aa10.57□□□□□ -0.72
PRKCB-208ENST00000487674 MROH7-TTC4A0A0A0MT08 1334 aa10.57□□□□□ -0.72
PRKCB-208ENST00000487674 BRCA2P51587 3418 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 PHIPQ8WWQ0 1821 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 MGAMO43451 1857 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 PHF20L1A8MW92 1017 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 CXCL11O14625 94 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 TIMM10P62072 90 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 TFCP2Q12800 502 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 SLC4A8Q2Y0W8 1093 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 ZFPM1Q8IX07 1006 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 SCYL3Q8IZE3 742 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 SH3TC2Q8TF17 1288 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 XAGE2Q96GT9 111 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 TRIM47Q96LD4 638 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 PICK1Q9NRD5 415 aa10.56□□□□□ -0.72
PRKCB-208ENST00000487674 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-208ENST00000487674 MKI67P46013 3256 aaKnown RBP10.55□□□□□ -0.72
PRKCB-208ENST00000487674 A0A0G2JLL6 359 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-208ENST00000487674 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
PRKCB-208ENST00000487674 ECM2O94769 699 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-208ENST00000487674 TRIM27P14373 513 aa10.55□□□□□ -0.72
PRKCB-208ENST00000487674 PTPRAP18433 802 aa10.55□□□□□ -0.72
PRKCB-208ENST00000487674 HOXD10P28358 340 aa10.55□□□□□ -0.72
PRKCB-208ENST00000487674 BTDP43251 543 aa10.55□□□□□ -0.72
PRKCB-208ENST00000487674 PSMC4P43686 418 aa10.55□□□□□ -0.72
PRKCB-208ENST00000487674 MAP3K10Q02779 954 aa10.55□□□□□ -0.72
PRKCB-208ENST00000487674 MECOMQ03112 1051 aa10.55□□□□□ -0.72
PRKCB-208ENST00000487674 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
PRKCB-208ENST00000487674 PRRT2Q7Z6L0 340 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-208ENST00000487674 ZSCAN29Q8IWY8 852 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-208ENST00000487674 SRRDQ9UH36 339 aa10.55□□□□□ -0.72
PRKCB-208ENST00000487674 GPR75-ASB3A0A0A6YYF3 556 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 DDTLA6NHG4 134 aaPredicted RBP10.54□□□□□ -0.72
PRKCB-208ENST00000487674 GNAI2P04899 355 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 BCRP11274 1271 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 OSBPP22059 807 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 CTGFP29279 349 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 PICALMQ13492 652 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 GPAT2Q6NUI2 795 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 TMEM92Q6UXU6 159 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 ATF7IPQ6VMQ6 1270 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 ERICH6Q7L0X2 663 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 FASTKD5Q7L8L6 764 aaKnown RBP10.54□□□□□ -0.72
PRKCB-208ENST00000487674 DDX4Q9NQI0 724 aaKnown RBP10.54□□□□□ -0.72
PRKCB-208ENST00000487674 SLC45A1Q9Y2W3 748 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 ZHX2Q9Y6X8 837 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 LOC285556D6RIA3 1793 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 MYPNQ86TC9 1320 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 ATAD5Q96QE3 1844 aa10.54□□□□□ -0.72
PRKCB-208ENST00000487674 CTNND1O60716 968 aaKnown RBP10.53□□□□□ -0.72
PRKCB-208ENST00000487674 FMNL1O95466 1100 aaPredicted RBP10.53□□□□□ -0.72
PRKCB-208ENST00000487674 MAP4K4O95819 1239 aaPredicted RBP10.53□□□□□ -0.72
PRKCB-208ENST00000487674 MYCP01106 439 aaPredicted RBP10.53□□□□□ -0.72
PRKCB-208ENST00000487674 CYP2C8P10632 490 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
PRKCB-208ENST00000487674 GRK4P32298 578 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 FCGRTP55899 365 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 RHBDL3P58872 404 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 GSTO1P78417 241 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 GORABQ5T7V8 394 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 SPATA5Q8NB90 893 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 RAET1EQ8TD07 263 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 ZNF384Q8TF68 577 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 HMG20BQ9P0W2 317 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 AFG3L2Q9Y4W6 797 aa10.53□□□□□ -0.72
PRKCB-208ENST00000487674 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.53□□□□□ -0.72
PRKCB-208ENST00000487674 CEP290O15078 2479 aa10.52□□□□□ -0.72
PRKCB-208ENST00000487674 PNMA6EA0A0J9YXQ4 647 aa10.52□□□□□ -0.73
PRKCB-208ENST00000487674 TBC1D12O60347 775 aa10.52□□□□□ -0.73
PRKCB-208ENST00000487674 LDHCP07864 332 aa10.52□□□□□ -0.73
PRKCB-208ENST00000487674 HABP4Q5JVS0 413 aaKnown RBP10.52□□□□□ -0.73
PRKCB-208ENST00000487674 PI16Q6UXB8 463 aa10.52□□□□□ -0.73
PRKCB-208ENST00000487674 GADL1Q6ZQY3 521 aa10.52□□□□□ -0.73
PRKCB-208ENST00000487674 FRAT1Q92837 279 aaPredicted RBP10.52□□□□□ -0.73
PRKCB-208ENST00000487674 RNF25Q96BH1 459 aaPredicted RBP10.52□□□□□ -0.73
PRKCB-208ENST00000487674 NSUN4Q96CB9 384 aaKnown RBP10.52□□□□□ -0.73
PRKCB-208ENST00000487674 SHISA4Q96DD7 197 aa10.52□□□□□ -0.73
PRKCB-208ENST00000487674 FOCADQ5VW36 1801 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 TRIM75PA6NK02 468 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 UQCRFS1P1P0C7P4 283 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 MCAMP43121 646 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 PRKCZQ05513 592 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 G3BP1Q13283 466 aaKnown RBP eCLIP10.51□□□□□ -0.73
PRKCB-208ENST00000487674 MTFR1Q15390 333 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 NKX2-3Q8TAU0 364 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 SMCR8Q8TEV9 937 aaPredicted RBP10.51□□□□□ -0.73
PRKCB-208ENST00000487674 RAI14Q9P0K7 980 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 AGTPBP1Q9UPW5 1226 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 TNNQ9UQP3 1299 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 SIPA1L1O43166 1804 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 CDK5RAP2Q96SN8 1893 aa10.51□□□□□ -0.73
PRKCB-208ENST00000487674 BCAR3O75815 825 aa10.5□□□□□ -0.73
PRKCB-208ENST00000487674 SLURP2P0DP57 97 aa10.5□□□□□ -0.73
PRKCB-208ENST00000487674 CCL5P13501 91 aa10.5□□□□□ -0.73
PRKCB-208ENST00000487674 UBXN2AP68543 259 aa10.5□□□□□ -0.73
PRKCB-208ENST00000487674 TBC1D9Q6ZT07 1266 aa10.5□□□□□ -0.73
PRKCB-208ENST00000487674 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms