RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 A0A087WWV3 80 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 WDHD1O75717 1129 aaPredicted RBP30.12■■■□□ 2.41
HLA-C-208ENST00000487245 CCZ1BP86790 482 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 CCZ1P86791 482 aaPredicted RBP30.12■■■□□ 2.41
HLA-C-208ENST00000487245 TSC1Q92574 1164 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 NLRP3Q96P20 1036 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 SETDB2Q96T68 719 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 ANKRD2Q9GZV1 360 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 TMED8Q6PL24 325 aaPredicted RBP30.12■■■□□ 2.41
HLA-C-208ENST00000487245 FBXO33Q7Z6M2 555 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 ESR2Q92731 530 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 FAM84BQ96KN1 310 aaPredicted RBP30.12■■■□□ 2.41
HLA-C-208ENST00000487245 MAP3K14Q99558 947 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 MYL10Q9BUA6 226 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.12■■■□□ 2.41
HLA-C-208ENST00000487245 BRIP1Q9BX63 1249 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 TUBE1Q9UJT0 475 aa30.12■■■□□ 2.41
HLA-C-208ENST00000487245 IQSEC3Q9UPP2 1182 aaPredicted RBP30.12■■■□□ 2.41
HLA-C-208ENST00000487245 MROH7-TTC4A0A0A0MT08 1334 aa30.11■■■□□ 2.41
HLA-C-208ENST00000487245 UBAP1LF5GYI3 381 aa30.11■■■□□ 2.41
HLA-C-208ENST00000487245 PCP11498 1178 aaKnown RBP30.11■■■□□ 2.41
HLA-C-208ENST00000487245 RPS8P62241 208 aaKnown RBP30.11■■■□□ 2.41
HLA-C-208ENST00000487245 SAFBQ15424 915 aaKnown RBP eCLIP30.11■■■□□ 2.41
HLA-C-208ENST00000487245 TPD52L1Q16890 204 aaPredicted RBP30.11■■■□□ 2.41
HLA-C-208ENST00000487245 ERCC4Q92889 916 aaPredicted RBP30.11■■■□□ 2.41
HLA-C-208ENST00000487245 C16orf45Q96MC5 204 aaPredicted RBP30.11■■■□□ 2.41
HLA-C-208ENST00000487245 UBAC1Q9BSL1 405 aa30.11■■■□□ 2.41
HLA-C-208ENST00000487245 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.11■■■□□ 2.41
HLA-C-208ENST00000487245 CASZ1Q86V15 1759 aa30.11■■■□□ 2.41
HLA-C-208ENST00000487245 IKBKBO14920 756 aa30.1■■■□□ 2.41
HLA-C-208ENST00000487245 TPM4P67936 248 aa30.1■■■□□ 2.41
HLA-C-208ENST00000487245 BICDL1Q6ZP65 573 aa30.1■■■□□ 2.41
HLA-C-208ENST00000487245 NBPF11Q86T75 865 aa30.1■■■□□ 2.41
HLA-C-208ENST00000487245 RIOK1Q9BRS2 568 aaKnown RBP30.1■■■□□ 2.41
HLA-C-208ENST00000487245 SKILP12757 684 aa30.1■■■□□ 2.41
HLA-C-208ENST00000487245 ZBTB22O15209 634 aa30.09■■■□□ 2.41
HLA-C-208ENST00000487245 ZPR1O75312 459 aa30.09■■■□□ 2.41
HLA-C-208ENST00000487245 ADGRA1Q86SQ6 560 aa30.09■■■□□ 2.41
HLA-C-208ENST00000487245 CELF1Q92879 486 aaKnown RBP30.09■■■□□ 2.41
HLA-C-208ENST00000487245 NYAP1Q6ZVC0 841 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 ELOA2Q8IYF1 753 aaPredicted RBP30.08■■■□□ 2.41
HLA-C-208ENST00000487245 CERKQ8TCT0 537 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 COL1A1P02452 1464 aaPredicted RBP30.08■■■□□ 2.41
HLA-C-208ENST00000487245 MINDY4BA8MYZ0 360 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 CUTAO60888 179 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 DEXIO95424 95 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 SYKP43405 635 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 ARID5BQ14865 1188 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 NCAPHQ15003 741 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 RESP18Q5W5W9 173 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 TPTE2Q6XPS3 522 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 NBPF5PQ86XG9 351 aaPredicted RBP30.08■■■□□ 2.41
HLA-C-208ENST00000487245 C8orf37Q96NL8 207 aa30.08■■■□□ 2.41
HLA-C-208ENST00000487245 CACNA1SQ13698 1873 aa30.07■■■□□ 2.4
HLA-C-208ENST00000487245 COL24A1Q17RW2 1714 aa30.07■■■□□ 2.4
HLA-C-208ENST00000487245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.07■■■□□ 2.4
HLA-C-208ENST00000487245 ZNF654Q8IZM8 581 aa30.07■■■□□ 2.4
HLA-C-208ENST00000487245 CRACR2BQ8N4Y2 399 aaPredicted RBP30.07■■■□□ 2.4
HLA-C-208ENST00000487245 FANCBQ8NB91 859 aa30.07■■■□□ 2.4
HLA-C-208ENST00000487245 SHC4Q6S5L8 630 aa30.06■■■□□ 2.4
HLA-C-208ENST00000487245 CCDC150Q8NCX0 1101 aa30.06■■■□□ 2.4
HLA-C-208ENST00000487245 SDR42E1Q8WUS8 393 aa30.06■■■□□ 2.4
HLA-C-208ENST00000487245 MMP1P03956 469 aa30.06■■■□□ 2.4
HLA-C-208ENST00000487245 KCNJ6P48051 423 aa30.06■■■□□ 2.4
HLA-C-208ENST00000487245 FILIP1Q7Z7B0 1213 aa30.06■■■□□ 2.4
HLA-C-208ENST00000487245 FNBP4Q8N3X1 1017 aaPredicted RBP30.06■■■□□ 2.4
HLA-C-208ENST00000487245 ZKSCAN3Q9BRR0 538 aa30.06■■■□□ 2.4
HLA-C-208ENST00000487245 MARCKSP29966 332 aaPredicted RBP30.05■■■□□ 2.4
HLA-C-208ENST00000487245 SEC23AQ15436 765 aa30.05■■■□□ 2.4
HLA-C-208ENST00000487245 NOSTRINQ8IVI9 506 aa30.05■■■□□ 2.4
HLA-C-208ENST00000487245 FOXP1Q9H334 677 aaPredicted RBP30.05■■■□□ 2.4
HLA-C-208ENST00000487245 MYO1BO43795 1136 aa30.04■■■□□ 2.4
HLA-C-208ENST00000487245 IGSF3O75054 1194 aa30.04■■■□□ 2.4
HLA-C-208ENST00000487245 CEP135Q66GS9 1140 aa30.04■■■□□ 2.4
HLA-C-208ENST00000487245 RTCBQ9Y3I0 505 aaKnown RBP30.04■■■□□ 2.4
HLA-C-208ENST00000487245 TAF1P21675 1872 aa30.04■■■□□ 2.4
HLA-C-208ENST00000487245 FGRP09769 529 aa30.04■■■□□ 2.4
HLA-C-208ENST00000487245 KCNQ4P56696 695 aa30.04■■■□□ 2.4
HLA-C-208ENST00000487245 XPO4Q9C0E2 1151 aaKnown RBP30.04■■■□□ 2.4
HLA-C-208ENST00000487245 HIBADHP31937 336 aaKnown RBP30.03■■■□□ 2.4
HLA-C-208ENST00000487245 CCAR2Q8N163 923 aaKnown RBP30.03■■■□□ 2.4
HLA-C-208ENST00000487245 KIF2AO00139 706 aaPredicted RBP30.02■■■□□ 2.4
HLA-C-208ENST00000487245 GNPATO15228 680 aa30.02■■■□□ 2.4
HLA-C-208ENST00000487245 CCDC112Q8NEF3 446 aa30.02■■■□□ 2.4
HLA-C-208ENST00000487245 TNKSO95271 1327 aa30.02■■■□□ 2.4
HLA-C-208ENST00000487245 BTAF1O14981 1849 aa30.02■■■□□ 2.4
HLA-C-208ENST00000487245 FBXW7Q969H0 707 aa30.02■■■□□ 2.4
HLA-C-208ENST00000487245 RNF26Q9BY78 433 aaPredicted RBP30.02■■■□□ 2.4
HLA-C-208ENST00000487245 IFNKQ9P0W0 207 aa30.02■■■□□ 2.4
HLA-C-208ENST00000487245 SRP68Q9UHB9 627 aaKnown RBP30.02■■■□□ 2.4
HLA-C-208ENST00000487245 NHSQ6T4R5 1651 aa30.01■■■□□ 2.39
HLA-C-208ENST00000487245 DYNLL1P63167 89 aaKnown RBP30.01■■■□□ 2.39
HLA-C-208ENST00000487245 PTPN14Q15678 1187 aa30.01■■■□□ 2.39
HLA-C-208ENST00000487245 RILPL1Q5EBL4 403 aa30.01■■■□□ 2.39
HLA-C-208ENST00000487245 NSUN4Q96CB9 384 aaKnown RBP30.01■■■□□ 2.39
HLA-C-208ENST00000487245 ZSCAN10Q96SZ4 725 aaPredicted RBP30.01■■■□□ 2.39
HLA-C-208ENST00000487245 CCNL1Q9UK58 526 aaPredicted RBP30.01■■■□□ 2.39
HLA-C-208ENST00000487245 WTIPA6NIX2 430 aaPredicted RBP30■■■□□ 2.39
HLA-C-208ENST00000487245 CALM1P0DP23 149 aa30■■■□□ 2.39
HLA-C-208ENST00000487245 CALM2P0DP24 149 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms