RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 NAV1Q8NEY1 1877 aa22.71■■□□□ 1.23
AGRN-208ENST00000479707 TBC1D12O60347 775 aa22.71■■□□□ 1.23
AGRN-208ENST00000479707 POLR3DP05423 398 aaPredicted RBP22.71■■□□□ 1.23
AGRN-208ENST00000479707 HLA-DOAP06340 250 aa22.71■■□□□ 1.23
AGRN-208ENST00000479707 OTUD5Q96G74 571 aa22.71■■□□□ 1.23
AGRN-208ENST00000479707 SEC62Q99442 399 aaKnown RBP22.71■■□□□ 1.23
AGRN-208ENST00000479707 BEGAINQ9BUH8 593 aa22.71■■□□□ 1.23
AGRN-208ENST00000479707 TRIM34Q9BYJ4 488 aa22.71■■□□□ 1.23
AGRN-208ENST00000479707 MCM9Q9NXL9 1143 aa22.71■■□□□ 1.23
AGRN-208ENST00000479707 M0R2C6 588 aa22.7■■□□□ 1.22
AGRN-208ENST00000479707 CRACR2BQ8N4Y2 399 aaPredicted RBP22.7■■□□□ 1.22
AGRN-208ENST00000479707 DCP1AQ9NPI6 582 aaPredicted RBP22.7■■□□□ 1.22
AGRN-208ENST00000479707 BAZ2AQ9UIF9 1905 aaKnown RBP22.69■■□□□ 1.22
AGRN-208ENST00000479707 ZBTB48P10074 688 aaPredicted RBP22.69■■□□□ 1.22
AGRN-208ENST00000479707 FOXP4Q8IVH2 680 aaPredicted RBP22.69■■□□□ 1.22
AGRN-208ENST00000479707 STRBPQ96SI9 672 aaKnown RBP22.69■■□□□ 1.22
AGRN-208ENST00000479707 FOXN1O15353 648 aa22.68■■□□□ 1.22
AGRN-208ENST00000479707 GPAA1O43292 621 aa22.68■■□□□ 1.22
AGRN-208ENST00000479707 PLCD1P51178 756 aa22.68■■□□□ 1.22
AGRN-208ENST00000479707 EVX2Q03828 476 aa22.68■■□□□ 1.22
AGRN-208ENST00000479707 TTC6Q86TZ1 520 aa22.68■■□□□ 1.22
AGRN-208ENST00000479707 ERO1BQ86YB8 467 aa22.68■■□□□ 1.22
AGRN-208ENST00000479707 CCDC136Q96JN2 1154 aa22.68■■□□□ 1.22
AGRN-208ENST00000479707 HERC5Q9UII4 1024 aaKnown RBP22.68■■□□□ 1.22
AGRN-208ENST00000479707 TSKSQ9UJT2 592 aa22.68■■□□□ 1.22
AGRN-208ENST00000479707 SPDYE5A6NIY4 337 aa22.67■■□□□ 1.22
AGRN-208ENST00000479707 CTNND1O60716 968 aaKnown RBP22.67■■□□□ 1.22
AGRN-208ENST00000479707 CYP2D6P10635 497 aa22.67■■□□□ 1.22
AGRN-208ENST00000479707 RRP1BQ14684 758 aaKnown RBP22.67■■□□□ 1.22
AGRN-208ENST00000479707 ZMYM1Q5SVZ6 1142 aa22.67■■□□□ 1.22
AGRN-208ENST00000479707 NOL9Q5SY16 702 aaKnown RBP22.67■■□□□ 1.22
AGRN-208ENST00000479707 CENPQQ7L2Z9 268 aaPredicted RBP22.67■■□□□ 1.22
AGRN-208ENST00000479707 SCYL3Q8IZE3 742 aa22.67■■□□□ 1.22
AGRN-208ENST00000479707 DNAJC18Q9H819 358 aa22.67■■□□□ 1.22
AGRN-208ENST00000479707 PICK1Q9NRD5 415 aa22.67■■□□□ 1.22
AGRN-208ENST00000479707 ATP8A2Q9NTI2 1148 aa22.67■■□□□ 1.22
AGRN-208ENST00000479707 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.67■■□□□ 1.22
AGRN-208ENST00000479707 PCNTO95613 3336 aa22.67■■□□□ 1.22
AGRN-208ENST00000479707 MANSC4A6NHS7 340 aaPredicted RBP22.65■■□□□ 1.22
AGRN-208ENST00000479707 IRF6O14896 467 aa22.65■■□□□ 1.22
AGRN-208ENST00000479707 TM4SF4P48230 202 aa22.65■■□□□ 1.22
AGRN-208ENST00000479707 SREBF2Q12772 1141 aa22.65■■□□□ 1.22
AGRN-208ENST00000479707 CCDC129Q6ZRS4 1044 aa22.65■■□□□ 1.22
AGRN-208ENST00000479707 CCDC84Q86UT8 332 aaPredicted RBP22.65■■□□□ 1.22
AGRN-208ENST00000479707 REM2Q8IYK8 340 aaPredicted RBP22.65■■□□□ 1.22
AGRN-208ENST00000479707 DDRGK1Q96HY6 314 aa22.65■■□□□ 1.22
AGRN-208ENST00000479707 SERPINB13Q9UIV8 391 aa22.65■■□□□ 1.22
AGRN-208ENST00000479707 DDX60LQ5H9U9 1706 aaKnown RBP22.65■■□□□ 1.22
AGRN-208ENST00000479707 DOCK1Q14185 1865 aa22.64■■□□□ 1.22
AGRN-208ENST00000479707 CYP2D7A0A087X1C5 515 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 USP17L12C9JPN9 530 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 USP17L21D6R901 530 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 TRPA1O75762 1119 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 APPP05067 770 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 PTPRAP18433 802 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 CAP2P40123 477 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 PPATQ06203 517 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 METTL16Q86W50 562 aaKnown RBP22.64■■□□□ 1.21
AGRN-208ENST00000479707 SKAP1Q86WV1 359 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 FAM227BQ96M60 508 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 RNF186Q9NXI6 227 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 ATAD5Q96QE3 1844 aa22.64■■□□□ 1.21
AGRN-208ENST00000479707 GSG1L2A8MUP6 293 aa22.63■■□□□ 1.21
AGRN-208ENST00000479707 SMIM22K7EJ46 135 aa22.63■■□□□ 1.21
AGRN-208ENST00000479707 GDF11O95390 407 aa22.63■■□□□ 1.21
AGRN-208ENST00000479707 PPIL2Q13356 520 aa22.63■■□□□ 1.21
AGRN-208ENST00000479707 TTC22Q5TAA0 569 aa22.63■■□□□ 1.21
AGRN-208ENST00000479707 MS4A4AQ96JQ5 239 aa22.63■■□□□ 1.21
AGRN-208ENST00000479707 ZHX2Q9Y6X8 837 aa22.63■■□□□ 1.21
AGRN-208ENST00000479707 GSPT1P15170 499 aaKnown RBP22.62■■□□□ 1.21
AGRN-208ENST00000479707 GTF2A2P52657 109 aa22.62■■□□□ 1.21
AGRN-208ENST00000479707 INHBEP58166 350 aa22.62■■□□□ 1.21
AGRN-208ENST00000479707 NMIQ13287 307 aaPredicted RBP22.62■■□□□ 1.21
AGRN-208ENST00000479707 SHROOM1Q2M3G4 852 aaPredicted RBP22.62■■□□□ 1.21
AGRN-208ENST00000479707 DYNLL2Q96FJ2 89 aa22.62■■□□□ 1.21
AGRN-208ENST00000479707 EHD4Q9H223 541 aa22.62■■□□□ 1.21
AGRN-208ENST00000479707 CCL15-CCL14A0A0B4J2E2 113 aa22.61■■□□□ 1.21
AGRN-208ENST00000479707 A0A0D9SFI3 127 aa22.61■■□□□ 1.21
AGRN-208ENST00000479707 PATL2C9JE40 543 aaKnown RBP22.61■■□□□ 1.21
AGRN-208ENST00000479707 GNAT2P19087 354 aa22.61■■□□□ 1.21
AGRN-208ENST00000479707 SDSP20132 328 aa22.61■■□□□ 1.21
AGRN-208ENST00000479707 CTCFP49711 727 aaPredicted RBP22.61■■□□□ 1.21
AGRN-208ENST00000479707 JAG1P78504 1218 aa22.61■■□□□ 1.21
AGRN-208ENST00000479707 CCL15Q16663 113 aa22.61■■□□□ 1.21
AGRN-208ENST00000479707 CTR9Q6PD62 1173 aa22.61■■□□□ 1.21
AGRN-208ENST00000479707 AMOTL1Q8IY63 956 aa22.61■■□□□ 1.21
AGRN-208ENST00000479707 HELLSQ9NRZ9 838 aa22.61■■□□□ 1.21
AGRN-208ENST00000479707 IGF2BP3O00425 579 aaKnown RBP eCLIP22.6■■□□□ 1.21
AGRN-208ENST00000479707 HSPA8P11142 646 aaKnown RBP22.6■■□□□ 1.21
AGRN-208ENST00000479707 TDO2P48775 406 aa22.6■■□□□ 1.21
AGRN-208ENST00000479707 LBX1P52954 281 aa22.6■■□□□ 1.21
AGRN-208ENST00000479707 SNAPC2Q13487 334 aa22.6■■□□□ 1.21
AGRN-208ENST00000479707 C12orf60Q5U649 245 aa22.6■■□□□ 1.21
AGRN-208ENST00000479707 IFNL1Q8IU54 200 aa22.6■■□□□ 1.21
AGRN-208ENST00000479707 STK11IPQ8N1F8 1099 aa22.6■■□□□ 1.21
AGRN-208ENST00000479707 SLC44A5Q8NCS7 719 aa22.6■■□□□ 1.21
AGRN-208ENST00000479707 BRI3BPQ8WY22 251 aa22.6■■□□□ 1.21
AGRN-208ENST00000479707 PTPN18Q99952 460 aa22.6■■□□□ 1.21
AGRN-208ENST00000479707 EPB41L4AQ9HCS5 686 aaPredicted RBP22.6■■□□□ 1.21
AGRN-208ENST00000479707 MINDY4BA8MYZ0 360 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms