RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 TGFBRAP1Q8WUH2 860 aa18.32■□□□□ 0.52
PRKN-207ENST00000479615 TRIM34Q9BYJ4 488 aa18.32■□□□□ 0.52
PRKN-207ENST00000479615 IL1RAPL2Q9NP60 686 aa18.32■□□□□ 0.52
PRKN-207ENST00000479615 HLA-DOAP06340 250 aa18.31■□□□□ 0.52
PRKN-207ENST00000479615 CAP2P40123 477 aa18.31■□□□□ 0.52
PRKN-207ENST00000479615 SOX10P56693 466 aa18.31■□□□□ 0.52
PRKN-207ENST00000479615 METTL16Q86W50 562 aaKnown RBP18.31■□□□□ 0.52
PRKN-207ENST00000479615 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
PRKN-207ENST00000479615 ARMC5Q96C12 935 aa18.31■□□□□ 0.52
PRKN-207ENST00000479615 AS3MTQ9HBK9 375 aa18.31■□□□□ 0.52
PRKN-207ENST00000479615 DOCK2Q92608 1830 aa18.3■□□□□ 0.52
PRKN-207ENST00000479615 FLT1P17948 1338 aa18.3■□□□□ 0.52
PRKN-207ENST00000479615 GPAT2Q6NUI2 795 aa18.3■□□□□ 0.52
PRKN-207ENST00000479615 ADGRA1Q86SQ6 560 aa18.3■□□□□ 0.52
PRKN-207ENST00000479615 MAGEB6Q8N7X4 407 aa18.3■□□□□ 0.52
PRKN-207ENST00000479615 PROCA1Q8NCQ7 364 aaPredicted RBP18.3■□□□□ 0.52
PRKN-207ENST00000479615 ZNF280CQ8ND82 737 aa18.3■□□□□ 0.52
PRKN-207ENST00000479615 PNMA3Q9UL41 463 aa18.3■□□□□ 0.52
PRKN-207ENST00000479615 TRIM75PA6NK02 468 aa18.29■□□□□ 0.52
PRKN-207ENST00000479615 USP17L5A8MUK1 530 aa18.29■□□□□ 0.52
PRKN-207ENST00000479615 ASNSP08243 561 aa18.29■□□□□ 0.52
PRKN-207ENST00000479615 PABPC4Q13310 644 aaKnown RBP eCLIP18.29■□□□□ 0.52
PRKN-207ENST00000479615 MAPKAPK5Q8IW41 473 aa18.29■□□□□ 0.52
PRKN-207ENST00000479615 CRACR2BQ8N4Y2 399 aaPredicted RBP18.29■□□□□ 0.52
PRKN-207ENST00000479615 USP5P45974 858 aa18.28■□□□□ 0.52
PRKN-207ENST00000479615 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
PRKN-207ENST00000479615 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
PRKN-207ENST00000479615 AGTPBP1Q9UPW5 1226 aa18.28■□□□□ 0.52
PRKN-207ENST00000479615 MAST2Q6P0Q8 1798 aa18.27■□□□□ 0.52
PRKN-207ENST00000479615 ADGRA2Q96PE1 1338 aa18.27■□□□□ 0.52
PRKN-207ENST00000479615 APBB1O00213 710 aa18.27■□□□□ 0.52
PRKN-207ENST00000479615 SLC9C1Q4G0N8 1177 aa18.27■□□□□ 0.52
PRKN-207ENST00000479615 WDR18Q9BV38 432 aa18.27■□□□□ 0.52
PRKN-207ENST00000479615 LRRCC1Q9C099 1032 aa18.27■□□□□ 0.52
PRKN-207ENST00000479615 ANTXR1Q9H6X2 564 aa18.27■□□□□ 0.52
PRKN-207ENST00000479615 CPA4Q9UI42 421 aa18.27■□□□□ 0.52
PRKN-207ENST00000479615 TAOK2Q9UL54 1235 aa18.27■□□□□ 0.52
PRKN-207ENST00000479615 BCRP11274 1271 aa18.26■□□□□ 0.51
PRKN-207ENST00000479615 ATP5JP18859 108 aa18.26■□□□□ 0.51
PRKN-207ENST00000479615 PSMC4P43686 418 aa18.26■□□□□ 0.51
PRKN-207ENST00000479615 SPP2Q13103 211 aa18.26■□□□□ 0.51
PRKN-207ENST00000479615 SLC9C2Q5TAH2 1124 aa18.26■□□□□ 0.51
PRKN-207ENST00000479615 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
PRKN-207ENST00000479615 TMEM106CQ9BVX2 250 aa18.26■□□□□ 0.51
PRKN-207ENST00000479615 EHD4Q9H223 541 aa18.26■□□□□ 0.51
PRKN-207ENST00000479615 PALD1Q9ULE6 856 aa18.26■□□□□ 0.51
PRKN-207ENST00000479615 MAGEB6P1A0A0J9YX57 407 aa18.25■□□□□ 0.51
PRKN-207ENST00000479615 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
PRKN-207ENST00000479615 C19orf81C9J6K1 198 aa18.25■□□□□ 0.51
PRKN-207ENST00000479615 FMNL1O95466 1100 aaPredicted RBP18.25■□□□□ 0.51
PRKN-207ENST00000479615 FCGRTP55899 365 aa18.25■□□□□ 0.51
PRKN-207ENST00000479615 DYNLL1P63167 89 aaKnown RBP18.25■□□□□ 0.51
PRKN-207ENST00000479615 SH3D19Q5HYK7 790 aa18.25■□□□□ 0.51
PRKN-207ENST00000479615 C20orf194Q5TEA3 1177 aa18.25■□□□□ 0.51
PRKN-207ENST00000479615 MIGA1Q8NAN2 632 aa18.25■□□□□ 0.51
PRKN-207ENST00000479615 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.51
PRKN-207ENST00000479615 SRRDQ9UH36 339 aa18.25■□□□□ 0.51
PRKN-207ENST00000479615 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
PRKN-207ENST00000479615 CYP2C8P10632 490 aa18.24■□□□□ 0.51
PRKN-207ENST00000479615 OSBPP22059 807 aa18.24■□□□□ 0.51
PRKN-207ENST00000479615 GCLCP48506 637 aaPredicted RBP18.24■□□□□ 0.51
PRKN-207ENST00000479615 ZNF333Q96JL9 665 aa18.24■□□□□ 0.51
PRKN-207ENST00000479615 DNAJC2Q99543 621 aaKnown RBP18.24■□□□□ 0.51
PRKN-207ENST00000479615 CRNKL1Q9BZJ0 848 aaKnown RBP18.24■□□□□ 0.51
PRKN-207ENST00000479615 SERPINB13Q9UIV8 391 aa18.24■□□□□ 0.51
PRKN-207ENST00000479615 PTCH2Q9Y6C5 1203 aa18.24■□□□□ 0.51
PRKN-207ENST00000479615 DOCK1Q14185 1865 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 GOLIM4O00461 696 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 PDE6AP16499 860 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 BACE1P56817 501 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 CAP1Q01518 475 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 TATDN1Q6P1N9 297 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 HAUS7Q99871 368 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 RIOK1Q9BRS2 568 aaKnown RBP18.23■□□□□ 0.51
PRKN-207ENST00000479615 PAG1Q9NWQ8 432 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 TMOD4Q9NZQ9 345 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 NDUFB9Q9Y6M9 179 aa18.23■□□□□ 0.51
PRKN-207ENST00000479615 ZSCAN25Q6NSZ9 544 aa18.22■□□□□ 0.51
PRKN-207ENST00000479615 GPATCH3Q96I76 525 aa18.22■□□□□ 0.51
PRKN-207ENST00000479615 TRIM47Q96LD4 638 aa18.22■□□□□ 0.51
PRKN-207ENST00000479615 ARHGAP39Q9C0H5 1083 aa18.22■□□□□ 0.51
PRKN-207ENST00000479615 DCTPP1Q9H773 170 aa18.22■□□□□ 0.51
PRKN-207ENST00000479615 DNAJC18Q9H819 358 aa18.22■□□□□ 0.51
PRKN-207ENST00000479615 SAP30BPQ9UHR5 308 aaKnown RBP18.22■□□□□ 0.51
PRKN-207ENST00000479615 USP17L10C9JJH3 530 aa18.21■□□□□ 0.51
PRKN-207ENST00000479615 HMGCS2P54868 508 aa18.21■□□□□ 0.51
PRKN-207ENST00000479615 RRP1BQ14684 758 aaKnown RBP18.21■□□□□ 0.51
PRKN-207ENST00000479615 FAM110CQ1W6H9 321 aa18.21■□□□□ 0.51
PRKN-207ENST00000479615 RAET1EQ8TD07 263 aa18.21■□□□□ 0.51
PRKN-207ENST00000479615 BOLA2Q9H3K6 86 aa18.21■□□□□ 0.51
PRKN-207ENST00000479615 ZBTB21Q9ULJ3 1066 aa18.21■□□□□ 0.51
PRKN-207ENST00000479615 ZNF532Q9HCE3 1301 aa18.21■□□□□ 0.51
PRKN-207ENST00000479615 POLR3DP05423 398 aaPredicted RBP18.2■□□□□ 0.5
PRKN-207ENST00000479615 HOXA7P31268 230 aaPredicted RBP18.2■□□□□ 0.5
PRKN-207ENST00000479615 GTF3C2Q8WUA4 911 aaPredicted RBP18.2■□□□□ 0.5
PRKN-207ENST00000479615 CABP5Q9NP86 173 aa18.2■□□□□ 0.5
PRKN-207ENST00000479615 ECHDC1Q9NTX5 307 aa18.2■□□□□ 0.5
PRKN-207ENST00000479615 MYPNQ86TC9 1320 aa18.2■□□□□ 0.5
PRKN-207ENST00000479615 TCRBV5S4A2TA0A5A2 114 aa18.19■□□□□ 0.5
PRKN-207ENST00000479615 CAPN2P17655 700 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms