RNA–Protein interactions for RNA: ENST00000477015.5

BDH1-213, Transcript of 3-hydroxybutyrate dehydrogenase 1, human

TSL 2

Gene BDH1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDH1-213	ENST00000477015	PNMA3	Q9UL41	463 aa		12.7	□□□□□ -0.38
BDH1-213	ENST00000477015	SLC45A1	Q9Y2W3	748 aa		12.7	□□□□□ -0.38
BDH1-213	ENST00000477015	RANBP2	P49792	3224 aa	Known RBP	12.7	□□□□□ -0.38
BDH1-213	ENST00000477015	SZT2	Q5T011	3432 aa		12.7	□□□□□ -0.38
BDH1-213	ENST00000477015	CEP290	O15078	2479 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	PNMA6E	A0A0J9YXQ4	647 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	IPO8	O15397	1037 aa	Known RBP	12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	BCAR3	O75815	825 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	MCAM	P43121	646 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	MAP3K10	Q02779	954 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	MTX1	Q13505	466 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	TTC39A	Q5SRH9	613 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	ZNF280C	Q8ND82	737 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	ARHGAP45	Q92619	1136 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	TRIM34	Q9BYJ4	488 aa		12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	RBM27	Q9P2N5	1060 aa	Known RBP	12.69	□□□□□ -0.38
BDH1-213	ENST00000477015	SGPL1	O95470	568 aa		12.68	□□□□□ -0.38
BDH1-213	ENST00000477015	ARID4A	P29374	1257 aa	Predicted RBP	12.68	□□□□□ -0.38
BDH1-213	ENST00000477015	NAA16	Q6N069	864 aa	Predicted RBP	12.68	□□□□□ -0.38
BDH1-213	ENST00000477015	NR2E3	Q9Y5X4	410 aa		12.68	□□□□□ -0.38
BDH1-213	ENST00000477015	USP17L5	A8MUK1	530 aa		12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	TBC1D12	O60347	775 aa		12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	UQCRFS1P1	P0C7P4	283 aa		12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	RRP1B	Q14684	758 aa	Known RBP	12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	FAM110C	Q1W6H9	321 aa		12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	ATF7IP	Q6VMQ6	1270 aa		12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	MAPKAPK5	Q8IW41	473 aa		12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	C1orf115	Q9H7X2	142 aa		12.67	□□□□□ -0.38
BDH1-213	ENST00000477015	MGAM	O43451	1857 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	ZBTB22	O15209	634 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	EVI5	O60447	810 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	GDF11	O95390	407 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	BAG3	O95817	575 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	CAP2	P40123	477 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	IRX3	P78415	501 aa	Predicted RBP	12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	MTMR2	Q13614	643 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	CCDC158	Q5M9N0	1113 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	UBE2Q1	Q7Z7E8	422 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	TMEM57	Q8N5G2	664 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	PXYLP1	Q8TE99	480 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	TGFBRAP1	Q8WUH2	860 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	AS3MT	Q9HBK9	375 aa		12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	SAP30BP	Q9UHR5	308 aa	Known RBP	12.66	□□□□□ -0.38
BDH1-213	ENST00000477015	PHIP	Q8WWQ0	1821 aa		12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	PEX10	O60683	326 aa		12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	NPM3	O75607	178 aa	Known RBP	12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	MAP4K4	O95819	1239 aa	Predicted RBP	12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	IRF5	Q13568	498 aa		12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	PAWR	Q96IZ0	340 aa	Known RBP	12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	DBNDD2	Q9BQY9	259 aa		12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	TMOD4	Q9NZQ9	345 aa		12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	PI4KB	Q9UBF8	816 aa		12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	HERC5	Q9UII4	1024 aa	Known RBP	12.65	□□□□□ -0.38
BDH1-213	ENST00000477015	FLT1	P17948	1338 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	TRIOBP	Q9H2D6	2365 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	ZBTB7B	O15156	539 aa	Predicted RBP	12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	SURF6	O75683	361 aa	Known RBP	12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	HMGCR	P04035	888 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	PLCG2	P16885	1265 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	GCLC	P48506	637 aa	Predicted RBP	12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	TRIM32	Q13049	653 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	TNNI3K	Q59H18	835 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	ZKSCAN2	Q63HK3	967 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	ADGRA1	Q86SQ6	560 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	DIS3L	Q8TF46	1054 aa	Known RBP	12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	TBC1D2	Q9BYX2	928 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.64	□□□□□ -0.39	7e-7	■■■■□ 26.7
BDH1-213	ENST00000477015	PAK6	Q9NQU5	681 aa	Predicted RBP	12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	PALD1	Q9ULE6	856 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	FPGT-TNNI3K	V9GXZ4	949 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	COL2A1	P02458	1487 aa	Predicted RBP	12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	PTPRF	P10586	1907 aa		12.64	□□□□□ -0.39
BDH1-213	ENST00000477015	CCER2	I3L3R5	266 aa		12.63	□□□□□ -0.39
BDH1-213	ENST00000477015	CYP2E1	P05181	493 aa	Predicted RBP	12.63	□□□□□ -0.39
BDH1-213	ENST00000477015	CYP2B6	P20813	491 aa		12.63	□□□□□ -0.39
BDH1-213	ENST00000477015	CCAR1	Q8IX12	1150 aa	Known RBP	12.63	□□□□□ -0.39
BDH1-213	ENST00000477015	FTSJ3	Q8IY81	847 aa	Known RBP	12.63	□□□□□ -0.39
BDH1-213	ENST00000477015	C7orf61	Q8IZ16	206 aa		12.63	□□□□□ -0.39
BDH1-213	ENST00000477015	PAGR1	Q9BTK6	254 aa		12.63	□□□□□ -0.39
BDH1-213	ENST00000477015	DHX36	Q9H2U1	1008 aa	Known RBP	12.63	□□□□□ -0.39
BDH1-213	ENST00000477015	ATAD5	Q96QE3	1844 aa		12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	LOC285556	D6RIA3	1793 aa		12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	IDH1	O75874	414 aa	Known RBP	12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	HLA-DOA	P06340	250 aa		12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	ASNS	P08243	561 aa		12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	ZAP70	P43403	619 aa		12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	BACE1	P56817	501 aa		12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	DYNLL1	P63167	89 aa	Known RBP	12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	JAG1	P78504	1218 aa		12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	ZYX	Q15942	572 aa	Known RBP	12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	SH3D19	Q5HYK7	790 aa		12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	NECAB2	Q7Z6G3	386 aa		12.62	□□□□□ -0.39
BDH1-213	ENST00000477015	ITPRIP	Q8IWB1	547 aa		12.62	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms