RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.39■■□□□ 1.01
SMIM4-202ENST00000476842 SNCAIPQ9Y6H5 919 aa21.39■■□□□ 1.01
SMIM4-202ENST00000476842 ZBTB48P10074 688 aaPredicted RBP21.38■■□□□ 1.01
SMIM4-202ENST00000476842 GNAT2P19087 354 aa21.38■■□□□ 1.01
SMIM4-202ENST00000476842 NOL9Q5SY16 702 aaKnown RBP21.38■■□□□ 1.01
SMIM4-202ENST00000476842 WNK4Q96J92 1243 aa21.38■■□□□ 1.01
SMIM4-202ENST00000476842 EHD4Q9H223 541 aa21.38■■□□□ 1.01
SMIM4-202ENST00000476842 GSG1L2A8MUP6 293 aa21.37■■□□□ 1.01
SMIM4-202ENST00000476842 CTNND1O60716 968 aaKnown RBP21.37■■□□□ 1.01
SMIM4-202ENST00000476842 POLR3DP05423 398 aaPredicted RBP21.37■■□□□ 1.01
SMIM4-202ENST00000476842 GSPT1P15170 499 aaKnown RBP21.37■■□□□ 1.01
SMIM4-202ENST00000476842 SDSP20132 328 aa21.37■■□□□ 1.01
SMIM4-202ENST00000476842 PLCD1P51178 756 aa21.37■■□□□ 1.01
SMIM4-202ENST00000476842 MAP2K1Q02750 393 aaPredicted RBP21.37■■□□□ 1.01
SMIM4-202ENST00000476842 GIMAP6Q6P9H5 292 aa21.37■■□□□ 1.01
SMIM4-202ENST00000476842 ERO1BQ86YB8 467 aa21.37■■□□□ 1.01
SMIM4-202ENST00000476842 REM2Q8IYK8 340 aaPredicted RBP21.37■■□□□ 1.01
SMIM4-202ENST00000476842 DDRGK1Q96HY6 314 aa21.37■■□□□ 1.01
SMIM4-202ENST00000476842 SPDYE5A6NIY4 337 aa21.36■■□□□ 1.01
SMIM4-202ENST00000476842 FAM196BA6NMK8 535 aa21.36■■□□□ 1.01
SMIM4-202ENST00000476842 PATL2C9JE40 543 aaKnown RBP21.36■■□□□ 1.01
SMIM4-202ENST00000476842 CRACR2BQ8N4Y2 399 aaPredicted RBP21.36■■□□□ 1.01
SMIM4-202ENST00000476842 OPTNQ96CV9 577 aa21.36■■□□□ 1.01
SMIM4-202ENST00000476842 TRIM34Q9BYJ4 488 aa21.36■■□□□ 1.01
SMIM4-202ENST00000476842 SERPINB13Q9UIV8 391 aa21.36■■□□□ 1.01
SMIM4-202ENST00000476842 GJA5P36382 358 aa21.35■■□□□ 1.01
SMIM4-202ENST00000476842 SLC4A8Q2Y0W8 1093 aa21.35■■□□□ 1.01
SMIM4-202ENST00000476842 MCMDC2Q4G0Z9 681 aa21.35■■□□□ 1.01
SMIM4-202ENST00000476842 SCYL3Q8IZE3 742 aa21.35■■□□□ 1.01
SMIM4-202ENST00000476842 FAM227BQ96M60 508 aa21.35■■□□□ 1.01
SMIM4-202ENST00000476842 DNAJC18Q9H819 358 aa21.35■■□□□ 1.01
SMIM4-202ENST00000476842 WBP1LQ9NX94 342 aa21.35■■□□□ 1.01
SMIM4-202ENST00000476842 USP17L12C9JPN9 530 aa21.34■■□□□ 1.01
SMIM4-202ENST00000476842 USP17L21D6R901 530 aa21.34■■□□□ 1.01
SMIM4-202ENST00000476842 HIP1O00291 1037 aa21.34■■□□□ 1.01
SMIM4-202ENST00000476842 CAP2P40123 477 aa21.34■■□□□ 1.01
SMIM4-202ENST00000476842 PPATQ06203 517 aa21.34■■□□□ 1.01
SMIM4-202ENST00000476842 MKRN3Q13064 507 aaKnown RBP21.34■■□□□ 1.01
SMIM4-202ENST00000476842 NMIQ13287 307 aaPredicted RBP21.34■■□□□ 1.01
SMIM4-202ENST00000476842 CNKSR2Q8WXI2 1034 aa21.34■■□□□ 1.01
SMIM4-202ENST00000476842 TAOK2Q9UL54 1235 aa21.34■■□□□ 1.01
SMIM4-202ENST00000476842 TM4SF4P48230 202 aa21.33■■□□□ 1.01
SMIM4-202ENST00000476842 INHBEP58166 350 aa21.33■■□□□ 1.01
SMIM4-202ENST00000476842 GABPAQ06546 454 aa21.33■■□□□ 1.01
SMIM4-202ENST00000476842 RRP1BQ14684 758 aaKnown RBP21.33■■□□□ 1.01
SMIM4-202ENST00000476842 SBK1Q52WX2 424 aa21.33■■□□□ 1.01
SMIM4-202ENST00000476842 C12orf60Q5U649 245 aa21.33■■□□□ 1.01
SMIM4-202ENST00000476842 TATDN1Q6P1N9 297 aa21.33■■□□□ 1.01
SMIM4-202ENST00000476842 CTR9Q6PD62 1173 aa21.33■■□□□ 1.01
SMIM4-202ENST00000476842 AMOTL1Q8IY63 956 aa21.33■■□□□ 1.01
SMIM4-202ENST00000476842 PICK1Q9NRD5 415 aa21.33■■□□□ 1.01
SMIM4-202ENST00000476842 A0A0D9SFI3 127 aa21.32■■□□□ 1
SMIM4-202ENST00000476842 MANSC4A6NHS7 340 aaPredicted RBP21.32■■□□□ 1
SMIM4-202ENST00000476842 APPP05067 770 aa21.32■■□□□ 1
SMIM4-202ENST00000476842 CYP2D6P10635 497 aa21.32■■□□□ 1
SMIM4-202ENST00000476842 PPIL2Q13356 520 aa21.32■■□□□ 1
SMIM4-202ENST00000476842 CCDC129Q6ZRS4 1044 aa21.32■■□□□ 1
SMIM4-202ENST00000476842 IFNL3Q8IZI9 196 aa21.32■■□□□ 1
SMIM4-202ENST00000476842 OTUD5Q96G74 571 aa21.32■■□□□ 1
SMIM4-202ENST00000476842 PTPRAP18433 802 aa21.31■■□□□ 1
SMIM4-202ENST00000476842 SREBF2Q12772 1141 aa21.31■■□□□ 1
SMIM4-202ENST00000476842 MS4A4AQ96JQ5 239 aa21.31■■□□□ 1
SMIM4-202ENST00000476842 NACAP1Q9BZK3 213 aa21.31■■□□□ 1
SMIM4-202ENST00000476842 DIAPH3Q9NSV4 1193 aa21.31■■□□□ 1
SMIM4-202ENST00000476842 GINM1Q9NU53 330 aa21.31■■□□□ 1
SMIM4-202ENST00000476842 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
SMIM4-202ENST00000476842 MYH7P12883 1935 aa21.31■■□□□ 1
SMIM4-202ENST00000476842 AK9Q5TCS8 1911 aa21.31■■□□□ 1
SMIM4-202ENST00000476842 FOCADQ5VW36 1801 aa21.3■■□□□ 1
SMIM4-202ENST00000476842 TESPA1A2RU30 521 aaPredicted RBP21.3■■□□□ 1
SMIM4-202ENST00000476842 IRF6O14896 467 aa21.3■■□□□ 1
SMIM4-202ENST00000476842 GTF2A2P52657 109 aa21.3■■□□□ 1
SMIM4-202ENST00000476842 EVX2Q03828 476 aa21.3■■□□□ 1
SMIM4-202ENST00000476842 SKAP1Q86WV1 359 aa21.3■■□□□ 1
SMIM4-202ENST00000476842 EPB41L4AQ9HCS5 686 aaPredicted RBP21.3■■□□□ 1
SMIM4-202ENST00000476842 ZHX2Q9Y6X8 837 aa21.3■■□□□ 1
SMIM4-202ENST00000476842 CDK5RAP2Q96SN8 1893 aa21.29■■□□□ 1
SMIM4-202ENST00000476842 CYP2D7A0A087X1C5 515 aa21.29■■□□□ 1
SMIM4-202ENST00000476842 HSPA1AP0DMV8 641 aaKnown RBP21.29■■□□□ 1
SMIM4-202ENST00000476842 HSPA1BP0DMV9 641 aaKnown RBP21.29■■□□□ 1
SMIM4-202ENST00000476842 SHMT1P34896 483 aa21.29■■□□□ 1
SMIM4-202ENST00000476842 CWC27Q6UX04 472 aaKnown RBP21.29■■□□□ 1
SMIM4-202ENST00000476842 BEGAINQ9BUH8 593 aa21.29■■□□□ 1
SMIM4-202ENST00000476842 SWAP70Q9UH65 585 aa21.29■■□□□ 1
SMIM4-202ENST00000476842 PCNTO95613 3336 aa21.29■■□□□ 1
SMIM4-202ENST00000476842 THSD7BQ9C0I4 1608 aa21.29■■□□□ 1
SMIM4-202ENST00000476842 CXCL11O14625 94 aa21.28■■□□□ 1
SMIM4-202ENST00000476842 FOXP2O15409 715 aa21.28■■□□□ 1
SMIM4-202ENST00000476842 ASNSP08243 561 aa21.28■■□□□ 1
SMIM4-202ENST00000476842 TDO2P48775 406 aa21.28■■□□□ 1
SMIM4-202ENST00000476842 MFAP1P55081 439 aaKnown RBP21.28■■□□□ 1
SMIM4-202ENST00000476842 JAG1P78504 1218 aa21.28■■□□□ 1
SMIM4-202ENST00000476842 CERKLQ49MI3 558 aaPredicted RBP21.28■■□□□ 1
SMIM4-202ENST00000476842 DYNLL2Q96FJ2 89 aa21.28■■□□□ 1
SMIM4-202ENST00000476842 KCNH4Q9UQ05 1017 aa21.28■■□□□ 1
SMIM4-202ENST00000476842 AFG3L2Q9Y4W6 797 aa21.28■■□□□ 1
SMIM4-202ENST00000476842 CA12O43570 354 aa21.27■■□□□ 1
SMIM4-202ENST00000476842 SNAPC2Q13487 334 aa21.27■■□□□ 1
SMIM4-202ENST00000476842 ALX1Q15699 326 aa21.27■■□□□ 1
SMIM4-202ENST00000476842 VPS53Q5VIR6 699 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms