RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 IRF5Q13568 498 aa23.21■■□□□ 1.31
SRSF4-202ENST00000466448 PXYLP1Q8TE99 480 aa23.21■■□□□ 1.31
SRSF4-202ENST00000466448 CEP290O15078 2479 aa23.21■■□□□ 1.31
SRSF4-202ENST00000466448 FARP2O94887 1054 aaPredicted RBP23.2■■□□□ 1.3
SRSF4-202ENST00000466448 SGPL1O95470 568 aa23.2■■□□□ 1.3
SRSF4-202ENST00000466448 RRP1BQ14684 758 aaKnown RBP23.2■■□□□ 1.3
SRSF4-202ENST00000466448 PROCA1Q8NCQ7 364 aaPredicted RBP23.2■■□□□ 1.3
SRSF4-202ENST00000466448 PNMA3Q9UL41 463 aa23.2■■□□□ 1.3
SRSF4-202ENST00000466448 RANBP2P49792 3224 aaKnown RBP23.2■■□□□ 1.3
SRSF4-202ENST00000466448 IPO8O15397 1037 aaKnown RBP23.19■■□□□ 1.3
SRSF4-202ENST00000466448 G3BP1Q13283 466 aaKnown RBP eCLIP23.19■■□□□ 1.3
SRSF4-202ENST00000466448 ATF7IPQ6VMQ6 1270 aa23.19■■□□□ 1.3
SRSF4-202ENST00000466448 ZNF280CQ8ND82 737 aa23.19■■□□□ 1.3
SRSF4-202ENST00000466448 FRAT1Q92837 279 aaPredicted RBP23.19■■□□□ 1.3
SRSF4-202ENST00000466448 LRP2BPQ9P2M1 347 aa23.19■■□□□ 1.3
SRSF4-202ENST00000466448 RBM27Q9P2N5 1060 aaKnown RBP23.19■■□□□ 1.3
SRSF4-202ENST00000466448 PTPRFP10586 1907 aa23.19■■□□□ 1.3
SRSF4-202ENST00000466448 MGAMO43451 1857 aa23.19■■□□□ 1.3
SRSF4-202ENST00000466448 BCAR3O75815 825 aa23.18■■□□□ 1.3
SRSF4-202ENST00000466448 CAP2P40123 477 aa23.18■■□□□ 1.3
SRSF4-202ENST00000466448 HMGCS2P54868 508 aa23.18■■□□□ 1.3
SRSF4-202ENST00000466448 FAM110CQ1W6H9 321 aa23.18■■□□□ 1.3
SRSF4-202ENST00000466448 TEX11Q8IYF3 940 aa23.18■■□□□ 1.3
SRSF4-202ENST00000466448 SH3RF3Q8TEJ3 882 aaPredicted RBP23.18■■□□□ 1.3
SRSF4-202ENST00000466448 CLUAP1Q96AJ1 413 aa23.18■■□□□ 1.3
SRSF4-202ENST00000466448 COA7Q96BR5 231 aa23.18■■□□□ 1.3
SRSF4-202ENST00000466448 TAOK2Q9UL54 1235 aa23.18■■□□□ 1.3
SRSF4-202ENST00000466448 UQCRFS1P1P0C7P4 283 aa23.17■■□□□ 1.3
SRSF4-202ENST00000466448 DEFB118Q96PH6 123 aa23.17■■□□□ 1.3
SRSF4-202ENST00000466448 PAK6Q9NQU5 681 aaPredicted RBP23.17■■□□□ 1.3
SRSF4-202ENST00000466448 SZT2Q5T011 3432 aa23.17■■□□□ 1.3
SRSF4-202ENST00000466448 CCER2I3L3R5 266 aa23.16■■□□□ 1.3
SRSF4-202ENST00000466448 TBC1D2Q9BYX2 928 aa23.16■■□□□ 1.3
SRSF4-202ENST00000466448 SNRKQ9NRH2 765 aa23.16■■□□□ 1.3
SRSF4-202ENST00000466448 HERC5Q9UII4 1024 aaKnown RBP23.16■■□□□ 1.3
SRSF4-202ENST00000466448 USP17L5A8MUK1 530 aa23.15■■□□□ 1.3
SRSF4-202ENST00000466448 TFRCP02786 760 aaKnown RBP23.15■■□□□ 1.3
SRSF4-202ENST00000466448 GCLCP48506 637 aaPredicted RBP23.15■■□□□ 1.3
SRSF4-202ENST00000466448 AATFQ9NY61 560 aaKnown RBP eCLIP23.15■■□□□ 1.3
SRSF4-202ENST00000466448 NR2E3Q9Y5X4 410 aa23.15■■□□□ 1.3
SRSF4-202ENST00000466448 LOC285556D6RIA3 1793 aa23.14■■□□□ 1.3
SRSF4-202ENST00000466448 TRIOBPQ9H2D6 2365 aa23.14■■□□□ 1.3
SRSF4-202ENST00000466448 PABPC4Q13310 644 aaKnown RBP eCLIP23.14■■□□□ 1.29
SRSF4-202ENST00000466448 SH3D19Q5HYK7 790 aa23.14■■□□□ 1.29
SRSF4-202ENST00000466448 ASCC2Q9H1I8 757 aaPredicted RBP23.14■■□□□ 1.29
SRSF4-202ENST00000466448 PRO3102Q9H379 93 aa23.14■■□□□ 1.29
SRSF4-202ENST00000466448 PI4KBQ9UBF8 816 aa23.14■■□□□ 1.29
SRSF4-202ENST00000466448 ZBTB7BO15156 539 aaPredicted RBP23.13■■□□□ 1.29
SRSF4-202ENST00000466448 TNNI3KQ59H18 835 aa23.13■■□□□ 1.29
SRSF4-202ENST00000466448 NAA16Q6N069 864 aaPredicted RBP23.13■■□□□ 1.29
SRSF4-202ENST00000466448 ADGRA1Q86SQ6 560 aa23.13■■□□□ 1.29
SRSF4-202ENST00000466448 NOL10Q9BSC4 688 aaKnown RBP23.13■■□□□ 1.29
SRSF4-202ENST00000466448 DHX36Q9H2U1 1008 aaKnown RBP23.13■■□□□ 1.29
SRSF4-202ENST00000466448 AS3MTQ9HBK9 375 aa23.13■■□□□ 1.29
SRSF4-202ENST00000466448 FPGT-TNNI3KV9GXZ4 949 aa23.13■■□□□ 1.29
SRSF4-202ENST00000466448 BAG3O95817 575 aa23.12■■□□□ 1.29
SRSF4-202ENST00000466448 JAG1P78504 1218 aa23.12■■□□□ 1.29
SRSF4-202ENST00000466448 POLA2Q14181 598 aa23.12■■□□□ 1.29
SRSF4-202ENST00000466448 TTC39AQ5SRH9 613 aa23.12■■□□□ 1.29
SRSF4-202ENST00000466448 TMEM57Q8N5G2 664 aa23.12■■□□□ 1.29
SRSF4-202ENST00000466448 DBNDD2Q9BQY9 259 aa23.12■■□□□ 1.29
SRSF4-202ENST00000466448 CRISPLD2Q9H0B8 497 aa23.12■■□□□ 1.29
SRSF4-202ENST00000466448 DNAJC18Q9H819 358 aa23.12■■□□□ 1.29
SRSF4-202ENST00000466448 GPR108Q9NPR9 543 aa23.12■■□□□ 1.29
SRSF4-202ENST00000466448 CAPN2P17655 700 aa23.11■■□□□ 1.29
SRSF4-202ENST00000466448 MTMR2Q13614 643 aa23.11■■□□□ 1.29
SRSF4-202ENST00000466448 MAPKAPK5Q8IW41 473 aa23.11■■□□□ 1.29
SRSF4-202ENST00000466448 TGFBRAP1Q8WUH2 860 aa23.11■■□□□ 1.29
SRSF4-202ENST00000466448 WDR18Q9BV38 432 aa23.11■■□□□ 1.29
SRSF4-202ENST00000466448 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.11■■□□□ 1.294e-38■■□□□ 14.4
SRSF4-202ENST00000466448 GJD2Q9UKL4 321 aa23.11■■□□□ 1.29
SRSF4-202ENST00000466448 FLT1P17948 1338 aa23.1■■□□□ 1.29
SRSF4-202ENST00000466448 EVI5O60447 810 aa23.1■■□□□ 1.29
SRSF4-202ENST00000466448 CYP2E1P05181 493 aaPredicted RBP23.1■■□□□ 1.29
SRSF4-202ENST00000466448 PLCG2P16885 1265 aa23.1■■□□□ 1.29
SRSF4-202ENST00000466448 PPP4CP60510 307 aa23.1■■□□□ 1.29
SRSF4-202ENST00000466448 CCDC158Q5M9N0 1113 aa23.1■■□□□ 1.29
SRSF4-202ENST00000466448 HMGCRP04035 888 aa23.09■■□□□ 1.29
SRSF4-202ENST00000466448 ASNSP08243 561 aa23.09■■□□□ 1.29
SRSF4-202ENST00000466448 BACE1P56817 501 aa23.09■■□□□ 1.29
SRSF4-202ENST00000466448 OS9Q13438 667 aaPredicted RBP23.09■■□□□ 1.29
SRSF4-202ENST00000466448 SHROOM1Q2M3G4 852 aaPredicted RBP23.09■■□□□ 1.29
SRSF4-202ENST00000466448 METTL16Q86W50 562 aaKnown RBP23.09■■□□□ 1.29
SRSF4-202ENST00000466448 SSH3Q8TE77 659 aa23.09■■□□□ 1.29
SRSF4-202ENST00000466448 PAWRQ96IZ0 340 aaKnown RBP23.09■■□□□ 1.29
SRSF4-202ENST00000466448 MORF4L1Q9UBU8 362 aa23.09■■□□□ 1.29
SRSF4-202ENST00000466448 MAST2Q6P0Q8 1798 aa23.09■■□□□ 1.29
SRSF4-202ENST00000466448 SIPA1L1O43166 1804 aa23.08■■□□□ 1.29
SRSF4-202ENST00000466448 IRX3P78415 501 aaPredicted RBP23.08■■□□□ 1.29
SRSF4-202ENST00000466448 TRIM32Q13049 653 aa23.08■■□□□ 1.29
SRSF4-202ENST00000466448 ZKSCAN2Q63HK3 967 aa23.08■■□□□ 1.29
SRSF4-202ENST00000466448 DIS3LQ8TF46 1054 aaKnown RBP23.08■■□□□ 1.29
SRSF4-202ENST00000466448 PALD1Q9ULE6 856 aa23.08■■□□□ 1.29
SRSF4-202ENST00000466448 ATAD5Q96QE3 1844 aa23.08■■□□□ 1.28
SRSF4-202ENST00000466448 SURF6O75683 361 aaKnown RBP23.07■■□□□ 1.28
SRSF4-202ENST00000466448 ZAP70P43403 619 aa23.07■■□□□ 1.28
SRSF4-202ENST00000466448 ATP8B2P98198 1209 aa23.07■■□□□ 1.28
SRSF4-202ENST00000466448 FOXP4Q8IVH2 680 aaPredicted RBP23.07■■□□□ 1.28
SRSF4-202ENST00000466448 CRACR2BQ8N4Y2 399 aaPredicted RBP23.07■■□□□ 1.28
SRSF4-202ENST00000466448 ZNF512BQ96KM6 892 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms