RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 CCDC84Q86UT8 332 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-214ENST00000465399 PROCA1Q8NCQ7 364 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-214ENST00000465399 DPF3Q92784 378 aa17.48■□□□□ 0.39
ATG4B-214ENST00000465399 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
ATG4B-214ENST00000465399 TBC1D2Q9BYX2 928 aa17.48■□□□□ 0.39
ATG4B-214ENST00000465399 LRP2BPQ9P2M1 347 aa17.48■□□□□ 0.39
ATG4B-214ENST00000465399 GABRQQ9UN88 632 aa17.48■□□□□ 0.39
ATG4B-214ENST00000465399 COLQQ9Y215 455 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-214ENST00000465399 SIPA1L1O43166 1804 aa17.48■□□□□ 0.39
ATG4B-214ENST00000465399 ADCY3O60266 1144 aa17.47■□□□□ 0.39
ATG4B-214ENST00000465399 BCAR3O75815 825 aa17.47■□□□□ 0.39
ATG4B-214ENST00000465399 TEX11Q8IYF3 940 aa17.47■□□□□ 0.39
ATG4B-214ENST00000465399 HTATIP2Q9BUP3 242 aa17.47■□□□□ 0.39
ATG4B-214ENST00000465399 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
ATG4B-214ENST00000465399 FLT3LGP49771 235 aa17.46■□□□□ 0.39
ATG4B-214ENST00000465399 FXR1P51114 621 aaKnown RBP eCLIP17.46■□□□□ 0.39
ATG4B-214ENST00000465399 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.39
ATG4B-214ENST00000465399 TREML2Q5T2D2 321 aa17.46■□□□□ 0.39
ATG4B-214ENST00000465399 ANKRD13CQ8N6S4 541 aa17.46■□□□□ 0.39
ATG4B-214ENST00000465399 ZNF280CQ8ND82 737 aa17.46■□□□□ 0.39
ATG4B-214ENST00000465399 PXYLP1Q8TE99 480 aa17.46■□□□□ 0.39
ATG4B-214ENST00000465399 COA7Q96BR5 231 aa17.46■□□□□ 0.39
ATG4B-214ENST00000465399 HERC5Q9UII4 1024 aaKnown RBP17.46■□□□□ 0.39
ATG4B-214ENST00000465399 BAG3O95817 575 aa17.45■□□□□ 0.38
ATG4B-214ENST00000465399 SPP2Q13103 211 aa17.45■□□□□ 0.38
ATG4B-214ENST00000465399 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-214ENST00000465399 IRF5Q13568 498 aa17.45■□□□□ 0.38
ATG4B-214ENST00000465399 FAM110CQ1W6H9 321 aa17.45■□□□□ 0.38
ATG4B-214ENST00000465399 TTC39AQ5SRH9 613 aa17.45■□□□□ 0.38
ATG4B-214ENST00000465399 U2AF1L4Q8WU68 220 aaKnown RBP17.45■□□□□ 0.38
ATG4B-214ENST00000465399 UNC93B1Q9H1C4 597 aa17.45■□□□□ 0.38
ATG4B-214ENST00000465399 INHAP05111 366 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 ELNP15502 786 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 PLCG2P16885 1265 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 CAP2P40123 477 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 GCLCP48506 637 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-214ENST00000465399 CCDC158Q5M9N0 1113 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 NAA16Q6N069 864 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-214ENST00000465399 UBE2Q1Q7Z7E8 422 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 TMEM57Q8N5G2 664 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 SH3RF3Q8TEJ3 882 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-214ENST00000465399 DHX36Q9H2U1 1008 aaKnown RBP17.44■□□□□ 0.38
ATG4B-214ENST00000465399 AS3MTQ9HBK9 375 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 GPR108Q9NPR9 543 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 PI4KBQ9UBF8 816 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 TAOK2Q9UL54 1235 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 MYH1P12882 1939 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 TRIOBPQ9H2D6 2365 aa17.44■□□□□ 0.38
ATG4B-214ENST00000465399 USP17L5A8MUK1 530 aa17.43■□□□□ 0.38
ATG4B-214ENST00000465399 FARP2O94887 1054 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-214ENST00000465399 SGPL1O95470 568 aa17.43■□□□□ 0.38
ATG4B-214ENST00000465399 HMGCS2P54868 508 aa17.43■□□□□ 0.38
ATG4B-214ENST00000465399 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
ATG4B-214ENST00000465399 AATFQ9NY61 560 aaKnown RBP eCLIP17.43■□□□□ 0.38
ATG4B-214ENST00000465399 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
ATG4B-214ENST00000465399 CAPN2P17655 700 aa17.42■□□□□ 0.38
ATG4B-214ENST00000465399 CHRDL2Q6WN34 429 aa17.42■□□□□ 0.38
ATG4B-214ENST00000465399 TRIM34Q9BYJ4 488 aa17.42■□□□□ 0.38
ATG4B-214ENST00000465399 SNRKQ9NRH2 765 aa17.42■□□□□ 0.38
ATG4B-214ENST00000465399 POLA2Q14181 598 aa17.41■□□□□ 0.38
ATG4B-214ENST00000465399 SSH3Q8TE77 659 aa17.41■□□□□ 0.38
ATG4B-214ENST00000465399 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
ATG4B-214ENST00000465399 NR2E3Q9Y5X4 410 aa17.41■□□□□ 0.38
ATG4B-214ENST00000465399 PLXNB2O15031 1838 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 IGSF3O75054 1194 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 SURF6O75683 361 aaKnown RBP17.4■□□□□ 0.38
ATG4B-214ENST00000465399 TFRCP02786 760 aaKnown RBP17.4■□□□□ 0.38
ATG4B-214ENST00000465399 ASNSP08243 561 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 PPP4CP60510 307 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 RRP1BQ14684 758 aaKnown RBP17.4■□□□□ 0.38
ATG4B-214ENST00000465399 SH3D19Q5HYK7 790 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 MAPKAPK5Q8IW41 473 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 FTSJ3Q8IY81 847 aaKnown RBP17.4■□□□□ 0.38
ATG4B-214ENST00000465399 CRACR2BQ8N4Y2 399 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-214ENST00000465399 TGFBRAP1Q8WUH2 860 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 DEFB118Q96PH6 123 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 ASCC2Q9H1I8 757 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-214ENST00000465399 ALPK3Q96L96 1907 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 FLT1P17948 1338 aa17.4■□□□□ 0.38
ATG4B-214ENST00000465399 CYP2E1P05181 493 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-214ENST00000465399 MTMR2Q13614 643 aa17.39■□□□□ 0.37
ATG4B-214ENST00000465399 ZNF512BQ96KM6 892 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-214ENST00000465399 WDR18Q9BV38 432 aa17.39■□□□□ 0.37
ATG4B-214ENST00000465399 PAK6Q9NQU5 681 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-214ENST00000465399 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.37
ATG4B-214ENST00000465399 BACE1P56817 501 aa17.38■□□□□ 0.37
ATG4B-214ENST00000465399 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-214ENST00000465399 ADGRA1Q86SQ6 560 aa17.38■□□□□ 0.37
ATG4B-214ENST00000465399 FOXP4Q8IVH2 680 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-214ENST00000465399 C1orf115Q9H7X2 142 aa17.38■□□□□ 0.37
ATG4B-214ENST00000465399 GINM1Q9NU53 330 aa17.38■□□□□ 0.37
ATG4B-214ENST00000465399 HMGCRP04035 888 aa17.37■□□□□ 0.37
ATG4B-214ENST00000465399 HLA-DOAP06340 250 aa17.37■□□□□ 0.37
ATG4B-214ENST00000465399 ITPRIPQ8IWB1 547 aa17.37■□□□□ 0.37
ATG4B-214ENST00000465399 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.37■□□□□ 0.372e-7■■■□□ 19.1
ATG4B-214ENST00000465399 RBM27Q9P2N5 1060 aaKnown RBP17.37■□□□□ 0.37
ATG4B-214ENST00000465399 C19orf81C9J6K1 198 aa17.36■□□□□ 0.37
ATG4B-214ENST00000465399 EVI5O60447 810 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms