RNA–Protein interactions for RNA: ENST00000464632.5

APTX-212, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-212ENST00000464632 SEMA3EO15041 775 aa13.22□□□□□ -0.29
APTX-212ENST00000464632 RFX5P48382 616 aaPredicted RBP13.22□□□□□ -0.29
APTX-212ENST00000464632 ATG9AQ7Z3C6 839 aa13.22□□□□□ -0.29
APTX-212ENST00000464632 CCDC84Q86UT8 332 aaPredicted RBP13.22□□□□□ -0.29
APTX-212ENST00000464632 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.22□□□□□ -0.29
APTX-212ENST00000464632 DDX60LQ5H9U9 1706 aaKnown RBP13.22□□□□□ -0.29
APTX-212ENST00000464632 ZBTB22O15209 634 aa13.21□□□□□ -0.29
APTX-212ENST00000464632 TBC1D12O60347 775 aa13.21□□□□□ -0.29
APTX-212ENST00000464632 PABPC4Q13310 644 aaKnown RBP eCLIP13.21□□□□□ -0.29
APTX-212ENST00000464632 ATP2B3Q16720 1220 aa13.21□□□□□ -0.29
APTX-212ENST00000464632 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.21□□□□□ -0.29
APTX-212ENST00000464632 ZGPATQ8N5A5 531 aaKnown RBP13.21□□□□□ -0.29
APTX-212ENST00000464632 FAM163AQ96GL9 167 aaPredicted RBP13.21□□□□□ -0.29
APTX-212ENST00000464632 USP44Q9H0E7 712 aa13.21□□□□□ -0.29
APTX-212ENST00000464632 DDX4Q9NQI0 724 aaKnown RBP13.21□□□□□ -0.29
APTX-212ENST00000464632 SPP2Q13103 211 aa13.2□□□□□ -0.3
APTX-212ENST00000464632 PICALMQ13492 652 aa13.2□□□□□ -0.3
APTX-212ENST00000464632 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
APTX-212ENST00000464632 SLF2Q8IX21 1173 aa13.2□□□□□ -0.3
APTX-212ENST00000464632 ZNF280CQ8ND82 737 aa13.2□□□□□ -0.3
APTX-212ENST00000464632 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
APTX-212ENST00000464632 PFASO15067 1338 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 PHKA1P46020 1223 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 ERICH6BQ5W0A0 696 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
APTX-212ENST00000464632 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
APTX-212ENST00000464632 TRIB2Q92519 343 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 OSBPL5Q9H0X9 879 aaPredicted RBP13.19□□□□□ -0.3
APTX-212ENST00000464632 ASCC2Q9H1I8 757 aaPredicted RBP13.19□□□□□ -0.3
APTX-212ENST00000464632 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
APTX-212ENST00000464632 CEP126Q9P2H0 1117 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 MORF4L1Q9UBU8 362 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 TTC28Q96AY4 2481 aa13.19□□□□□ -0.3
APTX-212ENST00000464632 EYSQ5T1H1 3165 aa13.18□□□□□ -0.3
APTX-212ENST00000464632 PLXNB2O15031 1838 aa13.18□□□□□ -0.3
APTX-212ENST00000464632 LOC285556D6RIA3 1793 aa13.18□□□□□ -0.3
APTX-212ENST00000464632 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
APTX-212ENST00000464632 CIAO1O76071 339 aa13.18□□□□□ -0.3
APTX-212ENST00000464632 COL6A1P12109 1028 aa13.18□□□□□ -0.3
APTX-212ENST00000464632 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
APTX-212ENST00000464632 CYP2B6P20813 491 aa13.18□□□□□ -0.3
APTX-212ENST00000464632 BTDP43251 543 aa13.18□□□□□ -0.3
APTX-212ENST00000464632 HMGCS2P54868 508 aa13.18□□□□□ -0.3
APTX-212ENST00000464632 MRPL50Q8N5N7 158 aaKnown RBP13.18□□□□□ -0.3
APTX-212ENST00000464632 PRUNE2Q8WUY3 3088 aa13.18□□□□□ -0.3
APTX-212ENST00000464632 PTPRCP08575 1304 aa13.17□□□□□ -0.3
APTX-212ENST00000464632 XRCC5P13010 732 aaKnown RBP13.17□□□□□ -0.3
APTX-212ENST00000464632 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
APTX-212ENST00000464632 SPTY2D1Q68D10 685 aaPredicted RBP13.17□□□□□ -0.3
APTX-212ENST00000464632 CCDC102BQ68D86 513 aa13.17□□□□□ -0.3
APTX-212ENST00000464632 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
APTX-212ENST00000464632 GUCD1Q96NT3 240 aa13.17□□□□□ -0.3
APTX-212ENST00000464632 NUDT12Q9BQG2 462 aa13.17□□□□□ -0.3
APTX-212ENST00000464632 SIL1Q9H173 461 aa13.17□□□□□ -0.3
APTX-212ENST00000464632 ABCF2Q9UG63 623 aa13.17□□□□□ -0.3
APTX-212ENST00000464632 MROH7-TTC4A0A0A0MT08 1334 aa13.16□□□□□ -0.3
APTX-212ENST00000464632 GPR75-ASB3A0A0A6YYF3 556 aa13.16□□□□□ -0.3
APTX-212ENST00000464632 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
APTX-212ENST00000464632 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
APTX-212ENST00000464632 CAP2P40123 477 aa13.16□□□□□ -0.3
APTX-212ENST00000464632 RHBDL3P58872 404 aa13.16□□□□□ -0.3
APTX-212ENST00000464632 MDM2Q00987 491 aaPredicted RBP13.16□□□□□ -0.3
APTX-212ENST00000464632 LRRC26Q2I0M4 334 aa13.16□□□□□ -0.3
APTX-212ENST00000464632 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
APTX-212ENST00000464632 PDS5AQ29RF7 1337 aaKnown RBP13.15□□□□□ -0.3
APTX-212ENST00000464632 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
APTX-212ENST00000464632 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
APTX-212ENST00000464632 ADORA1P30542 326 aa13.15□□□□□ -0.3
APTX-212ENST00000464632 IL15P40933 162 aaPredicted RBP13.15□□□□□ -0.3
APTX-212ENST00000464632 IRX3P78415 501 aaPredicted RBP13.15□□□□□ -0.3
APTX-212ENST00000464632 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
APTX-212ENST00000464632 RASGRF1Q13972 1273 aa13.15□□□□□ -0.3
APTX-212ENST00000464632 LHX8Q68G74 356 aa13.15□□□□□ -0.3
APTX-212ENST00000464632 P2RX7Q99572 595 aaKnown RBP13.15□□□□□ -0.3
APTX-212ENST00000464632 AS3MTQ9HBK9 375 aa13.15□□□□□ -0.3
APTX-212ENST00000464632 ATAD5Q96QE3 1844 aa13.14□□□□□ -0.31
APTX-212ENST00000464632 ZKSCAN1P17029 563 aaPredicted RBP13.14□□□□□ -0.31
APTX-212ENST00000464632 HOXA7P31268 230 aaPredicted RBP13.14□□□□□ -0.31
APTX-212ENST00000464632 MECOMQ03112 1051 aa13.14□□□□□ -0.31
APTX-212ENST00000464632 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
APTX-212ENST00000464632 RRP1BQ14684 758 aaKnown RBP13.14□□□□□ -0.31
APTX-212ENST00000464632 ERICH6Q7L0X2 663 aa13.14□□□□□ -0.31
APTX-212ENST00000464632 GPRC5AQ8NFJ5 357 aa13.14□□□□□ -0.31
APTX-212ENST00000464632 USP6NLQ92738 828 aa13.14□□□□□ -0.31
APTX-212ENST00000464632 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
APTX-212ENST00000464632 WDR18Q9BV38 432 aa13.14□□□□□ -0.31
APTX-212ENST00000464632 COL2A1P02458 1487 aaPredicted RBP13.14□□□□□ -0.31
APTX-212ENST00000464632 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
APTX-212ENST00000464632 MAPK4P31152 587 aa13.13□□□□□ -0.31
APTX-212ENST00000464632 RGS2P41220 211 aa13.13□□□□□ -0.31
APTX-212ENST00000464632 BACE1P56817 501 aa13.13□□□□□ -0.31
APTX-212ENST00000464632 HERVK_113P62684 666 aa13.13□□□□□ -0.31
APTX-212ENST00000464632 ZNF384Q8TF68 577 aa13.13□□□□□ -0.31
APTX-212ENST00000464632 FAM161BQ96MY7 647 aa13.13□□□□□ -0.31
APTX-212ENST00000464632 TXNRD2Q9NNW7 524 aa13.13□□□□□ -0.31
APTX-212ENST00000464632 TMOD4Q9NZQ9 345 aa13.13□□□□□ -0.31
APTX-212ENST00000464632 HERC5Q9UII4 1024 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms